RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
TRAPPC1-205ENST00000572656 FOXN1O15353 648 aa13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 GPTP24298 496 aa13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 MAP1SQ66K74 1059 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 CRAMP1Q96RY5 1269 aa13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
TRAPPC1-205ENST00000572656 NTSR2O95665 410 aa13.03□□□□□ -0.32
TRAPPC1-205ENST00000572656 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
TRAPPC1-205ENST00000572656 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
TRAPPC1-205ENST00000572656 PRDM10Q9NQV6 1147 aa13.03□□□□□ -0.32
TRAPPC1-205ENST00000572656 GJA3Q9Y6H8 435 aa13.03□□□□□ -0.32
TRAPPC1-205ENST00000572656 SCN4AP35499 1836 aa13.03□□□□□ -0.32
TRAPPC1-205ENST00000572656 ERBB4Q15303 1308 aa13.03□□□□□ -0.32
TRAPPC1-205ENST00000572656 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 LMOD1P29536 600 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 CTCFP49711 727 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 DEFB115Q30KQ5 88 aa13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 LARGE2Q8N3Y3 721 aa13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 WBP1LQ9NX94 342 aa13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.33
TRAPPC1-205ENST00000572656 PPEF1O14829 653 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC1-205ENST00000572656 PARP10Q53GL7 1025 aa13.01□□□□□ -0.33
TRAPPC1-205ENST00000572656 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
TRAPPC1-205ENST00000572656 CACNA1SQ13698 1873 aa13□□□□□ -0.33
TRAPPC1-205ENST00000572656 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
TRAPPC1-205ENST00000572656 TCERG1O14776 1098 aaKnown RBP13□□□□□ -0.33
TRAPPC1-205ENST00000572656 SCNN1DP51172 638 aa13□□□□□ -0.33
TRAPPC1-205ENST00000572656 SLC10A5Q5PT55 438 aa13□□□□□ -0.33
TRAPPC1-205ENST00000572656 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
TRAPPC1-205ENST00000572656 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
TRAPPC1-205ENST00000572656 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
TRAPPC1-205ENST00000572656 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
TRAPPC1-205ENST00000572656 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
TRAPPC1-205ENST00000572656 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 COL4A5P29400 1685 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 EPS15P42566 896 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 PDIA6Q15084 440 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 SLC51AQ86UW1 340 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 VPS33BQ9H267 617 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 ABT1Q9ULW3 272 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
TRAPPC1-205ENST00000572656 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
TRAPPC1-205ENST00000572656 PPIP5K2O43314 1243 aa12.98□□□□□ -0.33
TRAPPC1-205ENST00000572656 EIF2S2P20042 333 aaKnown RBP12.98□□□□□ -0.33
TRAPPC1-205ENST00000572656 MAP2K1Q02750 393 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC1-205ENST00000572656 LBX1P52954 281 aa12.97□□□□□ -0.33
TRAPPC1-205ENST00000572656 RIPK4P57078 832 aa12.97□□□□□ -0.33
TRAPPC1-205ENST00000572656 PROSER3Q2NL68 480 aa12.97□□□□□ -0.33
TRAPPC1-205ENST00000572656 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
TRAPPC1-205ENST00000572656 RTFDC1Q9BY42 306 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-205ENST00000572656 ABCC4O15439 1325 aa12.96□□□□□ -0.33
TRAPPC1-205ENST00000572656 BBOX1O75936 387 aa12.96□□□□□ -0.33
TRAPPC1-205ENST00000572656 AOC3Q16853 763 aa12.96□□□□□ -0.33
TRAPPC1-205ENST00000572656 HSP90AB3PQ58FF7 597 aa12.96□□□□□ -0.33
TRAPPC1-205ENST00000572656 ADARB2Q9NS39 739 aaKnown RBP12.96□□□□□ -0.33
TRAPPC1-205ENST00000572656 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.33
TRAPPC1-205ENST00000572656 ANXA1P04083 346 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 HSPA8P11142 646 aaKnown RBP12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 FMR1Q06787 632 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 CXCL9Q07325 125 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 CST9Q5W186 159 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 COPS6Q7L5N1 327 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 NLRP10Q86W26 655 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 SP8Q8IXZ3 490 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 GPRC5DQ9NZD1 345 aa12.95□□□□□ -0.34
TRAPPC1-205ENST00000572656 TRAF5O00463 557 aa12.94□□□□□ -0.34
TRAPPC1-205ENST00000572656 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC1-205ENST00000572656 TMPOP42166 694 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-205ENST00000572656 ECE1P42892 770 aa12.94□□□□□ -0.34
TRAPPC1-205ENST00000572656 MPNDQ8N594 471 aa12.94□□□□□ -0.34
TRAPPC1-205ENST00000572656 XAGE3Q8WTP9 111 aa12.94□□□□□ -0.34
TRAPPC1-205ENST00000572656 CAPNS2Q96L46 248 aa12.94□□□□□ -0.34
TRAPPC1-205ENST00000572656 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 NUP98P52948 1817 aa12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 TCIRG1Q13488 830 aa12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 RALBP1Q15311 655 aa12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 NECTIN2Q92692 538 aa12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 GPR101Q96P66 508 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
TRAPPC1-205ENST00000572656 SH3TC1Q8TE82 1336 aa12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms