RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 CCT2P78371 535 aaKnown RBP13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 CCDC57Q2TAC2 916 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 TMEM63CQ9P1W3 806 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 CABP4P57796 275 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 ANO6Q4KMQ2 910 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 TRIM22Q8IYM9 498 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 PRR36Q9H6K5 1346 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 HMGB1P09429 215 aaKnown RBP13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 PPFIBP1Q86W92 1011 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 MYD88Q99836 296 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 PNPLA6Q8IY17 1366 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 LTKP29376 864 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 C8orf76Q96K31 380 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 NEK1Q96PY6 1258 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 PPP1R9BQ96SB3 815 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 STRN4Q9NRL3 753 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 STX1AQ16623 288 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 IMMTQ16891 758 aaKnown RBP13□□□□□ -0.33
PCDHGA4-201ENST00000571252 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 DACH1Q9UI36 760 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 CDKL5O76039 1030 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 HYPKQ9NX55 129 aa13□□□□□ -0.33
PCDHGA4-201ENST00000571252 SOS1Q07889 1333 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 ERCC4Q92889 916 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 HMG20BQ9P0W2 317 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 ARHGEF40Q8TER5 1519 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 PPFIA3O75145 1194 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 PKP1Q13835 747 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 AMOTQ4VCS5 1084 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 TYRO3Q06418 890 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 CD2BP2O95400 341 aaKnown RBP12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 GSDMDP57764 484 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 AK7Q96M32 723 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 PAXBP1Q9Y5B6 917 aa12.99□□□□□ -0.33
PCDHGA4-201ENST00000571252 IFT172Q9UG01 1749 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 ATP7BP35670 1465 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 BIN1O00499 593 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 CHL1O00533 1208 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 CPA1P15085 419 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 CEP135Q66GS9 1140 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 BRF1Q92994 677 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 RUFY1Q96T51 708 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 ABCC4O15439 1325 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 TERF1P54274 439 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 LEKR1Q6ZMV7 388 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 DNAJC25Q9H1X3 360 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 SHPRHQ149N8 1683 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 NPHP3Q7Z494 1330 aa12.98□□□□□ -0.33
PCDHGA4-201ENST00000571252 SETQ01105 290 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 ROBO2Q9HCK4 1378 aa12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 PTGS1P23219 599 aa12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 SF3B2Q13435 895 aaKnown RBP12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 TMC6Q7Z403 805 aa12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 EYA1Q99502 592 aa12.97□□□□□ -0.33
PCDHGA4-201ENST00000571252 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 BRD1O95696 1058 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 SKILP12757 684 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 NAP1L1P55209 391 aaKnown RBP12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 TCEAL9Q9UHQ7 104 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 A0A087WZG4 1122 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 ZSCAN25Q6NSZ9 544 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 PA2G4Q9UQ80 394 aaKnown RBP12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
PCDHGA4-201ENST00000571252 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA4-201ENST00000571252 TOP1P11387 765 aaKnown RBP12.96□□□□□ -0.34
PCDHGA4-201ENST00000571252 TAF3Q5VWG9 929 aa12.96□□□□□ -0.34
PCDHGA4-201ENST00000571252 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.34
PCDHGA4-201ENST00000571252 TOM1L2Q6ZVM7 507 aa12.96□□□□□ -0.34
PCDHGA4-201ENST00000571252 ZSCAN12O43309 604 aa12.96□□□□□ -0.34
PCDHGA4-201ENST00000571252 ERLIN1O75477 346 aa12.96□□□□□ -0.34
PCDHGA4-201ENST00000571252 NUP133Q8WUM0 1156 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 421.7 ms