RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
ITGA3-216ENST00000570989 TPM3P06753 285 aa17.31■□□□□ 0.36
ITGA3-216ENST00000570989 U2AF2P26368 475 aaKnown RBP eCLIP17.31■□□□□ 0.36
ITGA3-216ENST00000570989 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
ITGA3-216ENST00000570989 SSH3Q8TE77 659 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 HYPKQ9NX55 129 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 ATP6V1DQ9Y5K8 247 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 TNS3Q68CZ2 1445 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 CACNA1FO60840 1977 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 PXDNQ92626 1479 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 COL16A1Q07092 1604 aaPredicted RBP17.3■□□□□ 0.36
ITGA3-216ENST00000570989 ST3GAL1Q11201 340 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 ERBB3P21860 1342 aa17.3■□□□□ 0.36
ITGA3-216ENST00000570989 GJB2P29033 226 aa17.29■□□□□ 0.36
ITGA3-216ENST00000570989 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
ITGA3-216ENST00000570989 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
ITGA3-216ENST00000570989 KIF20AO95235 890 aa17.29■□□□□ 0.36
ITGA3-216ENST00000570989 PTGS1P23219 599 aa17.29■□□□□ 0.36
ITGA3-216ENST00000570989 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
ITGA3-216ENST00000570989 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
ITGA3-216ENST00000570989 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
ITGA3-216ENST00000570989 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
ITGA3-216ENST00000570989 CCDC192P0DO97 292 aa17.28■□□□□ 0.36
ITGA3-216ENST00000570989 NCBP1Q09161 790 aaKnown RBP17.28■□□□□ 0.36
ITGA3-216ENST00000570989 AHDC1Q5TGY3 1603 aaPredicted RBP17.28■□□□□ 0.36
ITGA3-216ENST00000570989 CASTP20810 708 aaKnown RBP17.27■□□□□ 0.36
ITGA3-216ENST00000570989 POLA2Q14181 598 aa17.27■□□□□ 0.36
ITGA3-216ENST00000570989 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
ITGA3-216ENST00000570989 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
ITGA3-216ENST00000570989 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.35
ITGA3-216ENST00000570989 FAM200AQ8TCP9 573 aa17.27■□□□□ 0.35
ITGA3-216ENST00000570989 BBXQ8WY36 941 aaPredicted RBP17.27■□□□□ 0.35
ITGA3-216ENST00000570989 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.35
ITGA3-216ENST00000570989 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
ITGA3-216ENST00000570989 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 RHPN1Q8TCX5 695 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 COL18A1P39060 1754 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
ITGA3-216ENST00000570989 ADCK5Q3MIX3 580 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 AKAP4Q5JQC9 854 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 TTC6Q86TZ1 520 aa17.26■□□□□ 0.35
ITGA3-216ENST00000570989 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 CWC27Q6UX04 472 aaKnown RBP17.25■□□□□ 0.35
ITGA3-216ENST00000570989 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 SPATA31A3Q5VYP0 1347 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 SURF6O75683 361 aaKnown RBP17.25■□□□□ 0.35
ITGA3-216ENST00000570989 LIG1P18858 919 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 TYRO3Q06418 890 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 LRMPQ12912 555 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 LUZP1Q86V48 1076 aa17.25■□□□□ 0.35
ITGA3-216ENST00000570989 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
ITGA3-216ENST00000570989 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
ITGA3-216ENST00000570989 PTH1RQ03431 593 aa17.24■□□□□ 0.35
ITGA3-216ENST00000570989 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
ITGA3-216ENST00000570989 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
ITGA3-216ENST00000570989 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
ITGA3-216ENST00000570989 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
ITGA3-216ENST00000570989 KCNB2Q92953 911 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 FEZ1Q99689 392 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 PDRG1Q9NUG6 133 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 ABCC6O95255 1503 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 MAP3K11Q16584 847 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 ME3Q16798 604 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 CCDC186Q7Z3E2 898 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 JAKMIP1Q96N16 626 aaKnown RBP17.23■□□□□ 0.35
ITGA3-216ENST00000570989 ZSWIM6Q9HCJ5 1215 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 NRBP1Q9UHY1 535 aa17.23■□□□□ 0.35
ITGA3-216ENST00000570989 SYCP1Q15431 976 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 CAMK4Q16566 473 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 C1orf141Q5JVX7 400 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 CBX8Q9HC52 389 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
ITGA3-216ENST00000570989 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
ITGA3-216ENST00000570989 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 IGSF3O75054 1194 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
ITGA3-216ENST00000570989 ZSCAN31Q96LW9 406 aaPredicted RBP17.22■□□□□ 0.35
ITGA3-216ENST00000570989 SMTNL1A8MU46 457 aa17.21■□□□□ 0.35
ITGA3-216ENST00000570989 TEFQ10587 303 aa17.21■□□□□ 0.35
ITGA3-216ENST00000570989 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
ITGA3-216ENST00000570989 FAM173BQ6P4H8 233 aa17.21■□□□□ 0.35
ITGA3-216ENST00000570989 PLA2G4DQ86XP0 818 aa17.21■□□□□ 0.35
ITGA3-216ENST00000570989 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
ITGA3-216ENST00000570989 C16orf45Q96MC5 204 aaPredicted RBP17.21■□□□□ 0.35
ITGA3-216ENST00000570989 TM6SF1Q9BZW5 370 aa17.21■□□□□ 0.35
ITGA3-216ENST00000570989 ELP1O95163 1332 aa17.21■□□□□ 0.35
ITGA3-216ENST00000570989 PRPF40BQ6NWY9 871 aaKnown RBP17.21■□□□□ 0.34
ITGA3-216ENST00000570989 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.34
ITGA3-216ENST00000570989 OGFRQ9NZT2 677 aa17.21■□□□□ 0.34
ITGA3-216ENST00000570989 CHMP3Q9Y3E7 222 aa17.21■□□□□ 0.34
ITGA3-216ENST00000570989 ZNF75DP51815 510 aa17.2■□□□□ 0.34
ITGA3-216ENST00000570989 NAA30Q147X3 362 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms