RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 CCDC87Q9NVE4 849 aa10.48□□□□□ -0.73
RAB11A-209ENST00000569896 RTCBQ9Y3I0 505 aaKnown RBP10.48□□□□□ -0.73
RAB11A-209ENST00000569896 CASZ1Q86V15 1759 aa10.47□□□□□ -0.73
RAB11A-209ENST00000569896 SRCAPQ6ZRS2 3230 aa10.47□□□□□ -0.73
RAB11A-209ENST00000569896 CYP19A1P11511 503 aaPredicted RBP10.47□□□□□ -0.73
RAB11A-209ENST00000569896 EIF4A1P60842 406 aaKnown RBP10.47□□□□□ -0.73
RAB11A-209ENST00000569896 RC3H1Q5TC82 1133 aaKnown RBP10.47□□□□□ -0.73
RAB11A-209ENST00000569896 FLAD1Q8NFF5 587 aa10.47□□□□□ -0.73
RAB11A-209ENST00000569896 EMILIN3Q9NT22 766 aa10.47□□□□□ -0.73
RAB11A-209ENST00000569896 IFT57Q9NWB7 429 aa10.47□□□□□ -0.73
RAB11A-209ENST00000569896 CNTNAP4Q9C0A0 1308 aa10.47□□□□□ -0.73
RAB11A-209ENST00000569896 RPS6KA4O75676 772 aa10.46□□□□□ -0.74
RAB11A-209ENST00000569896 CANXP27824 592 aaKnown RBP10.46□□□□□ -0.74
RAB11A-209ENST00000569896 TRAPPC3LQ5T215 181 aa10.46□□□□□ -0.74
RAB11A-209ENST00000569896 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.74
RAB11A-209ENST00000569896 ARXQ96QS3 562 aa10.46□□□□□ -0.74
RAB11A-209ENST00000569896 MBIPQ9NS73 344 aa10.46□□□□□ -0.74
RAB11A-209ENST00000569896 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.74
RAB11A-209ENST00000569896 USP16Q9Y5T5 823 aa10.46□□□□□ -0.74
RAB11A-209ENST00000569896 C4AP0C0L4 1744 aa10.46□□□□□ -0.74
RAB11A-209ENST00000569896 PNPLA7Q6ZV29 1317 aa10.46□□□□□ -0.74
RAB11A-209ENST00000569896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.45□□□□□ -0.74
RAB11A-209ENST00000569896 PRAMEF22A3QJZ6 481 aa10.45□□□□□ -0.74
RAB11A-209ENST00000569896 GIGYF1O75420 1035 aaPredicted RBP10.45□□□□□ -0.74
RAB11A-209ENST00000569896 SSFA2P28290 1259 aa10.45□□□□□ -0.74
RAB11A-209ENST00000569896 SMIM5Q71RC9 77 aa10.45□□□□□ -0.74
RAB11A-209ENST00000569896 COL23A1Q86Y22 540 aaPredicted RBP10.45□□□□□ -0.74
RAB11A-209ENST00000569896 WDR63Q8IWG1 891 aa10.45□□□□□ -0.74
RAB11A-209ENST00000569896 PDGFDQ9GZP0 370 aaPredicted RBP10.45□□□□□ -0.74
RAB11A-209ENST00000569896 CACNA1FO60840 1977 aa10.45□□□□□ -0.74
RAB11A-209ENST00000569896 ZBTB7AO95365 584 aa10.44□□□□□ -0.74
RAB11A-209ENST00000569896 A1BGP04217 495 aa10.44□□□□□ -0.74
RAB11A-209ENST00000569896 EIF2S2P20042 333 aaKnown RBP10.44□□□□□ -0.74
RAB11A-209ENST00000569896 RFC4P35249 363 aa10.44□□□□□ -0.74
RAB11A-209ENST00000569896 INTS5Q6P9B9 1019 aaKnown RBP10.44□□□□□ -0.74
RAB11A-209ENST00000569896 ELL2O00472 640 aaPredicted RBP10.43□□□□□ -0.74
RAB11A-209ENST00000569896 ZNF853P0CG23 659 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 PIP4K2AP48426 406 aaPredicted RBP10.43□□□□□ -0.74
RAB11A-209ENST00000569896 PSEN2P49810 448 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
RAB11A-209ENST00000569896 AMIGO3Q86WK7 504 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 NECTIN2Q92692 538 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 TSR2Q969E8 191 aaKnown RBP10.43□□□□□ -0.74
RAB11A-209ENST00000569896 KCNK17Q96T54 332 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 ZBTB1Q9Y2K1 713 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 IL16Q14005 1332 aa10.43□□□□□ -0.74
RAB11A-209ENST00000569896 NUP98P52948 1817 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 ZPR1O75312 459 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 FOSBP53539 338 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 CAMK2BQ13554 666 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 KRT24Q2M2I5 525 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 ARHGEF1Q92888 912 aaKnown RBP10.42□□□□□ -0.74
RAB11A-209ENST00000569896 MYH16Q9H6N6 1097 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 SPON1Q9HCB6 807 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 COL15A1P39059 1388 aa10.42□□□□□ -0.74
RAB11A-209ENST00000569896 A0A087WZG4 1122 aa10.41□□□□□ -0.74
RAB11A-209ENST00000569896 MYL6BP14649 208 aa10.41□□□□□ -0.74
RAB11A-209ENST00000569896 IL6STP40189 918 aaPredicted RBP10.41□□□□□ -0.74
RAB11A-209ENST00000569896 MSL1Q68DK7 614 aa10.41□□□□□ -0.74
RAB11A-209ENST00000569896 ADGRD1Q6QNK2 874 aa10.41□□□□□ -0.74
RAB11A-209ENST00000569896 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
RAB11A-209ENST00000569896 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
RAB11A-209ENST00000569896 POLD1P28340 1107 aa10.4□□□□□ -0.74
RAB11A-209ENST00000569896 SOS1Q07889 1333 aaPredicted RBP10.4□□□□□ -0.74
RAB11A-209ENST00000569896 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
RAB11A-209ENST00000569896 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
RAB11A-209ENST00000569896 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
RAB11A-209ENST00000569896 TBC1D2BQ9UPU7 963 aa10.4□□□□□ -0.74
RAB11A-209ENST00000569896 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.75
RAB11A-209ENST00000569896 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 HOXB7P09629 217 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 EIF5P55010 431 aaKnown RBP10.39□□□□□ -0.75
RAB11A-209ENST00000569896 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
RAB11A-209ENST00000569896 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 CHMP4AQ9BY43 222 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 BCL2L12Q9HB09 334 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 SRP68Q9UHB9 627 aaKnown RBP10.39□□□□□ -0.75
RAB11A-209ENST00000569896 BCORQ6W2J9 1755 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 COL24A1Q17RW2 1714 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 LRP5O75197 1615 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 ZNF521Q96K83 1311 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 TK2O00142 265 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 DPYSL4O14531 572 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 PTPREP23469 700 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
RAB11A-209ENST00000569896 TWISTNBQ3B726 338 aaPredicted RBP10.39□□□□□ -0.75
RAB11A-209ENST00000569896 USPL1Q5W0Q7 1092 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 DZIP3Q86Y13 1208 aaKnown RBP10.39□□□□□ -0.75
RAB11A-209ENST00000569896 NLGN1Q8N2Q7 840 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 NARFQ9UHQ1 456 aa10.39□□□□□ -0.75
RAB11A-209ENST00000569896 AFDNP55196 1824 aaKnown RBP10.38□□□□□ -0.75
RAB11A-209ENST00000569896 ERBB4Q15303 1308 aa10.38□□□□□ -0.75
RAB11A-209ENST00000569896 USP42Q9H9J4 1324 aaKnown RBP10.38□□□□□ -0.75
RAB11A-209ENST00000569896 E9PSI1 815 aa10.38□□□□□ -0.75
RAB11A-209ENST00000569896 ANXA1P04083 346 aa10.38□□□□□ -0.75
RAB11A-209ENST00000569896 KIF6Q6ZMV9 814 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms