RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 FKBP4Q02790 459 aaKnown RBP eCLIP14.9□□□□□ -0.02
CHRFAM7A-206ENST00000569278 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
CHRFAM7A-206ENST00000569278 RIC1Q4ADV7 1423 aa14.9□□□□□ -0.02
CHRFAM7A-206ENST00000569278 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
CHRFAM7A-206ENST00000569278 SOGA3Q5TF21 947 aa14.89□□□□□ -0.03
CHRFAM7A-206ENST00000569278 MIS18AQ9NYP9 233 aa14.89□□□□□ -0.03
CHRFAM7A-206ENST00000569278 NIP7Q9Y221 180 aaKnown RBP eCLIP14.89□□□□□ -0.03
CHRFAM7A-206ENST00000569278 UBN2Q6ZU65 1347 aa14.89□□□□□ -0.03
CHRFAM7A-206ENST00000569278 U2AF1L5P0DN76 240 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-206ENST00000569278 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-206ENST00000569278 U2AF1Q01081 240 aaKnown RBP eCLIP14.88□□□□□ -0.03
CHRFAM7A-206ENST00000569278 LDHDQ86WU2 507 aa14.88□□□□□ -0.03
CHRFAM7A-206ENST00000569278 FAM177BA6PVY3 158 aa14.87□□□□□ -0.03
CHRFAM7A-206ENST00000569278 FZD9O00144 591 aa14.87□□□□□ -0.03
CHRFAM7A-206ENST00000569278 FOXN1O15353 648 aa14.87□□□□□ -0.03
CHRFAM7A-206ENST00000569278 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
CHRFAM7A-206ENST00000569278 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
CHRFAM7A-206ENST00000569278 ZNF652Q9Y2D9 606 aa14.87□□□□□ -0.03
CHRFAM7A-206ENST00000569278 RNF123Q5XPI4 1314 aa14.87□□□□□ -0.03
CHRFAM7A-206ENST00000569278 LAMB2P55268 1798 aa14.86□□□□□ -0.03
CHRFAM7A-206ENST00000569278 NPHP1O15259 732 aa14.86□□□□□ -0.03
CHRFAM7A-206ENST00000569278 TTLL7Q6ZT98 887 aa14.86□□□□□ -0.03
CHRFAM7A-206ENST00000569278 C3orf67Q6ZVT6 689 aa14.86□□□□□ -0.03
CHRFAM7A-206ENST00000569278 NUTM1Q86Y26 1132 aa14.86□□□□□ -0.03
CHRFAM7A-206ENST00000569278 PLEKHF1Q96S99 279 aa14.86□□□□□ -0.03
CHRFAM7A-206ENST00000569278 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
CHRFAM7A-206ENST00000569278 IBTKQ9P2D0 1353 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-206ENST00000569278 IQCA1LA6NCM1 817 aa14.85□□□□□ -0.03
CHRFAM7A-206ENST00000569278 HTATSF1O43719 755 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-206ENST00000569278 IARSP41252 1262 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-206ENST00000569278 POTEHQ6S545 545 aa14.85□□□□□ -0.03
CHRFAM7A-206ENST00000569278 LRP10Q7Z4F1 713 aa14.85□□□□□ -0.03
CHRFAM7A-206ENST00000569278 THUMPD2Q9BTF0 503 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-206ENST00000569278 VEGFBP49765 207 aa14.84□□□□□ -0.03
CHRFAM7A-206ENST00000569278 TPTE2Q6XPS3 522 aa14.84□□□□□ -0.03
CHRFAM7A-206ENST00000569278 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
CHRFAM7A-206ENST00000569278 MAP3K15Q6ZN16 1313 aa14.84□□□□□ -0.03
CHRFAM7A-206ENST00000569278 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.03
CHRFAM7A-206ENST00000569278 EPHX2P34913 555 aa14.83□□□□□ -0.04
CHRFAM7A-206ENST00000569278 EIF4A1P60842 406 aaKnown RBP14.83□□□□□ -0.04
CHRFAM7A-206ENST00000569278 TAF7Q15545 349 aaPredicted RBP14.83□□□□□ -0.04
CHRFAM7A-206ENST00000569278 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
CHRFAM7A-206ENST00000569278 SYNE4Q8N205 404 aa14.83□□□□□ -0.04
CHRFAM7A-206ENST00000569278 PSMD1Q99460 953 aa14.83□□□□□ -0.04
CHRFAM7A-206ENST00000569278 NUDCQ9Y266 331 aa14.83□□□□□ -0.04
CHRFAM7A-206ENST00000569278 COL4A1P02462 1669 aa14.82□□□□□ -0.04
CHRFAM7A-206ENST00000569278 NTSR2O95665 410 aa14.82□□□□□ -0.04
CHRFAM7A-206ENST00000569278 SCNN1DP51172 638 aa14.82□□□□□ -0.04
CHRFAM7A-206ENST00000569278 FMR1Q06787 632 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHRFAM7A-206ENST00000569278 MAP1SQ66K74 1059 aaPredicted RBP14.82□□□□□ -0.04
CHRFAM7A-206ENST00000569278 RTKN2Q8IZC4 609 aa14.82□□□□□ -0.04
CHRFAM7A-206ENST00000569278 HACL1Q9UJ83 578 aa14.82□□□□□ -0.04
CHRFAM7A-206ENST00000569278 DUOX1Q9NRD9 1551 aa14.81□□□□□ -0.04
CHRFAM7A-206ENST00000569278 TMEM88BA6NKF7 163 aa14.81□□□□□ -0.04
CHRFAM7A-206ENST00000569278 ERVV-1B6SEH8 477 aa14.81□□□□□ -0.04
CHRFAM7A-206ENST00000569278 CENPBP07199 599 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-206ENST00000569278 HOXA10P31260 410 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-206ENST00000569278 EAPPQ56P03 285 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-206ENST00000569278 SUSD4Q5VX71 490 aa14.81□□□□□ -0.04
CHRFAM7A-206ENST00000569278 RASSF10A6NK89 507 aa14.8□□□□□ -0.04
CHRFAM7A-206ENST00000569278 GPTP24298 496 aa14.8□□□□□ -0.04
CHRFAM7A-206ENST00000569278 ZNF34Q8IZ26 560 aa14.8□□□□□ -0.04
CHRFAM7A-206ENST00000569278 GPC2Q8N158 579 aa14.8□□□□□ -0.04
CHRFAM7A-206ENST00000569278 NGEFQ8N5V2 710 aa14.8□□□□□ -0.04
CHRFAM7A-206ENST00000569278 WBP1LQ9NX94 342 aa14.8□□□□□ -0.04
CHRFAM7A-206ENST00000569278 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
CHRFAM7A-206ENST00000569278 LRRC37AA6NMS7 1700 aa14.79□□□□□ -0.04
CHRFAM7A-206ENST00000569278 PDIA6Q15084 440 aa14.79□□□□□ -0.04
CHRFAM7A-206ENST00000569278 PROSER3Q2NL68 480 aa14.79□□□□□ -0.04
CHRFAM7A-206ENST00000569278 ZBTB3Q9H5J0 574 aa14.79□□□□□ -0.04
CHRFAM7A-206ENST00000569278 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
CHRFAM7A-206ENST00000569278 TAF1P21675 1872 aa14.78□□□□□ -0.04
CHRFAM7A-206ENST00000569278 ALDH1B1P30837 517 aa14.78□□□□□ -0.04
CHRFAM7A-206ENST00000569278 NFE2L2Q16236 605 aa14.78□□□□□ -0.04
CHRFAM7A-206ENST00000569278 CNTROBQ8N137 903 aa14.78□□□□□ -0.04
CHRFAM7A-206ENST00000569278 PRDM10Q9NQV6 1147 aa14.78□□□□□ -0.04
CHRFAM7A-206ENST00000569278 DDX60Q8IY21 1712 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-206ENST00000569278 HSPA8P11142 646 aaKnown RBP14.77□□□□□ -0.05
CHRFAM7A-206ENST00000569278 MYL6BP14649 208 aa14.77□□□□□ -0.05
CHRFAM7A-206ENST00000569278 EPS15P42566 896 aa14.77□□□□□ -0.05
CHRFAM7A-206ENST00000569278 NYXQ9GZU5 481 aa14.77□□□□□ -0.05
CHRFAM7A-206ENST00000569278 RRP7AQ9Y3A4 280 aaKnown RBP14.77□□□□□ -0.05
CHRFAM7A-206ENST00000569278 PPEF1O14829 653 aaPredicted RBP14.76□□□□□ -0.05
CHRFAM7A-206ENST00000569278 PNMA8AQ86V59 439 aaPredicted RBP14.76□□□□□ -0.05
CHRFAM7A-206ENST00000569278 ABCC4O15439 1325 aa14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 ANXA1P04083 346 aa14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 LBX1P52954 281 aa14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 GIGYF2Q6Y7W6 1299 aaKnown RBP14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 PNISRQ8TF01 805 aaKnown RBP14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 CRAMP1Q96RY5 1269 aa14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 DDX21Q9NR30 783 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHRFAM7A-206ENST00000569278 ERBB4Q15303 1308 aa14.74□□□□□ -0.05
CHRFAM7A-206ENST00000569278 TRAF5O00463 557 aa14.74□□□□□ -0.05
CHRFAM7A-206ENST00000569278 CTCFP49711 727 aaPredicted RBP14.74□□□□□ -0.05
CHRFAM7A-206ENST00000569278 CST9Q5W186 159 aa14.74□□□□□ -0.05
CHRFAM7A-206ENST00000569278 CC2D2BQ6DHV5 1058 aa14.74□□□□□ -0.05
CHRFAM7A-206ENST00000569278 RPGRQ92834 1020 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-206ENST00000569278 GJA3Q9Y6H8 435 aa14.74□□□□□ -0.05
CHRFAM7A-206ENST00000569278 WDR33Q9C0J8 1336 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms