RNA–Protein interactions for RNA: ENST00000568692.1

TSC2-224, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 636 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-224ENST00000568692 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
TSC2-224ENST00000568692 IQCA1LA6NCM1 817 aa13.16□□□□□ -0.3
TSC2-224ENST00000568692 NTSR2O95665 410 aa13.16□□□□□ -0.3
TSC2-224ENST00000568692 EIF2S2P20042 333 aaKnown RBP13.16□□□□□ -0.3
TSC2-224ENST00000568692 IARSP41252 1262 aaKnown RBP13.16□□□□□ -0.3
TSC2-224ENST00000568692 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
TSC2-224ENST00000568692 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
TSC2-224ENST00000568692 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
TSC2-224ENST00000568692 PSMD1Q99460 953 aa13.16□□□□□ -0.3
TSC2-224ENST00000568692 ZNF541Q9H0D2 1346 aa13.15□□□□□ -0.3
TSC2-224ENST00000568692 FZD9O00144 591 aa13.15□□□□□ -0.3
TSC2-224ENST00000568692 PARP10Q53GL7 1025 aa13.15□□□□□ -0.3
TSC2-224ENST00000568692 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
TSC2-224ENST00000568692 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
TSC2-224ENST00000568692 RPGRQ92834 1020 aaKnown RBP13.15□□□□□ -0.3
TSC2-224ENST00000568692 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
TSC2-224ENST00000568692 SCN4AP35499 1836 aa13.14□□□□□ -0.31
TSC2-224ENST00000568692 CHL1O00533 1208 aa13.14□□□□□ -0.31
TSC2-224ENST00000568692 ANXA1P04083 346 aa13.14□□□□□ -0.31
TSC2-224ENST00000568692 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
TSC2-224ENST00000568692 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
TSC2-224ENST00000568692 CRAMP1Q96RY5 1269 aa13.14□□□□□ -0.31
TSC2-224ENST00000568692 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
TSC2-224ENST00000568692 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
TSC2-224ENST00000568692 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
TSC2-224ENST00000568692 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
TSC2-224ENST00000568692 LDHDQ86WU2 507 aa13.13□□□□□ -0.31
TSC2-224ENST00000568692 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
TSC2-224ENST00000568692 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
TSC2-224ENST00000568692 KRT24Q2M2I5 525 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 XAGE3Q8WTP9 111 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 NLRP3Q96P20 1036 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
TSC2-224ENST00000568692 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 COL4A5P29400 1685 aa13.12□□□□□ -0.31
TSC2-224ENST00000568692 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
TSC2-224ENST00000568692 WDR43Q15061 677 aaKnown RBP eCLIP13.11□□□□□ -0.31
TSC2-224ENST00000568692 GPC2Q8N158 579 aa13.11□□□□□ -0.31
TSC2-224ENST00000568692 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
TSC2-224ENST00000568692 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
TSC2-224ENST00000568692 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
TSC2-224ENST00000568692 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
TSC2-224ENST00000568692 RNF123Q5XPI4 1314 aa13.11□□□□□ -0.31
TSC2-224ENST00000568692 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
TSC2-224ENST00000568692 EPHX2P34913 555 aa13.1□□□□□ -0.31
TSC2-224ENST00000568692 AIMP1Q12904 312 aaKnown RBP13.1□□□□□ -0.31
TSC2-224ENST00000568692 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
TSC2-224ENST00000568692 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
TSC2-224ENST00000568692 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
TSC2-224ENST00000568692 ADAMTSL1Q8N6G6 1762 aa13.09□□□□□ -0.31
TSC2-224ENST00000568692 TCERG1O14776 1098 aaKnown RBP13.09□□□□□ -0.31
TSC2-224ENST00000568692 HOXB7P09629 217 aa13.09□□□□□ -0.31
TSC2-224ENST00000568692 EAPPQ56P03 285 aaPredicted RBP13.09□□□□□ -0.31
TSC2-224ENST00000568692 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
TSC2-224ENST00000568692 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
TSC2-224ENST00000568692 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
TSC2-224ENST00000568692 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
TSC2-224ENST00000568692 ABCC4O15439 1325 aa13.09□□□□□ -0.31
TSC2-224ENST00000568692 ANKRD36CQ5JPF3 1778 aa13.08□□□□□ -0.32
TSC2-224ENST00000568692 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
TSC2-224ENST00000568692 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
TSC2-224ENST00000568692 EIF6P56537 245 aaKnown RBP13.08□□□□□ -0.32
TSC2-224ENST00000568692 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.32
TSC2-224ENST00000568692 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
TSC2-224ENST00000568692 PRKRIP1Q9H875 184 aaPredicted RBP13.08□□□□□ -0.32
TSC2-224ENST00000568692 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
TSC2-224ENST00000568692 BBOX1O75936 387 aa13.07□□□□□ -0.32
TSC2-224ENST00000568692 HCLS1P14317 486 aaPredicted RBP13.07□□□□□ -0.32
TSC2-224ENST00000568692 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
TSC2-224ENST00000568692 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
TSC2-224ENST00000568692 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
TSC2-224ENST00000568692 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
TSC2-224ENST00000568692 TRMT112Q9UI30 125 aaKnown RBP13.07□□□□□ -0.32
TSC2-224ENST00000568692 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
TSC2-224ENST00000568692 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
TSC2-224ENST00000568692 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
TSC2-224ENST00000568692 SCNN1DP51172 638 aa13.06□□□□□ -0.32
TSC2-224ENST00000568692 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
TSC2-224ENST00000568692 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
TSC2-224ENST00000568692 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
TSC2-224ENST00000568692 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
TSC2-224ENST00000568692 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
TSC2-224ENST00000568692 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
TSC2-224ENST00000568692 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 LAMB2P55268 1798 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 ZNF853P0CG23 659 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 AOC3Q16853 763 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 MAP1SQ66K74 1059 aaPredicted RBP13.05□□□□□ -0.32
TSC2-224ENST00000568692 ANKRD13DQ6ZTN6 518 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 ISCA1Q9BUE6 129 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
TSC2-224ENST00000568692 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms