RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 LRP10Q7Z4F1 713 aa30.31■■■□□ 2.44
CNEP1R1-209ENST00000567712 ZNF34Q8IZ26 560 aa30.31■■■□□ 2.44
CNEP1R1-209ENST00000567712 PSMD1Q99460 953 aa30.31■■■□□ 2.44
CNEP1R1-209ENST00000567712 CNTNAP1P78357 1384 aa30.3■■■□□ 2.44
CNEP1R1-209ENST00000567712 EPHX2P34913 555 aa30.3■■■□□ 2.44
CNEP1R1-209ENST00000567712 NTSR2O95665 410 aa30.29■■■□□ 2.44
CNEP1R1-209ENST00000567712 HOXA10P31260 410 aaPredicted RBP30.29■■■□□ 2.44
CNEP1R1-209ENST00000567712 IBTKQ9P2D0 1353 aaPredicted RBP30.28■■■□□ 2.44
CNEP1R1-209ENST00000567712 PDIA6Q15084 440 aa30.28■■■□□ 2.44
CNEP1R1-209ENST00000567712 RIC1Q4ADV7 1423 aa30.28■■■□□ 2.44
CNEP1R1-209ENST00000567712 CLEC11AQ9Y240 323 aa30.27■■■□□ 2.44
CNEP1R1-209ENST00000567712 ANXA1P04083 346 aa30.26■■■□□ 2.43
CNEP1R1-209ENST00000567712 PROSER3Q2NL68 480 aa30.26■■■□□ 2.43
CNEP1R1-209ENST00000567712 GIGYF2Q6Y7W6 1299 aaKnown RBP30.26■■■□□ 2.43
CNEP1R1-209ENST00000567712 RPGRQ92834 1020 aaKnown RBP30.26■■■□□ 2.43
CNEP1R1-209ENST00000567712 TCERG1O14776 1098 aaKnown RBP30.25■■■□□ 2.43
CNEP1R1-209ENST00000567712 MAP1SQ66K74 1059 aaPredicted RBP30.25■■■□□ 2.43
CNEP1R1-209ENST00000567712 GPC2Q8N158 579 aa30.25■■■□□ 2.43
CNEP1R1-209ENST00000567712 MAPK8IP3Q9UPT6 1336 aa30.24■■■□□ 2.43
CNEP1R1-209ENST00000567712 TMEM88BA6NKF7 163 aa30.24■■■□□ 2.43
CNEP1R1-209ENST00000567712 VEGFBP49765 207 aa30.24■■■□□ 2.43
CNEP1R1-209ENST00000567712 TSPYL4Q9UJ04 414 aa30.24■■■□□ 2.43
CNEP1R1-209ENST00000567712 LAMB2P55268 1798 aa30.23■■■□□ 2.43
CNEP1R1-209ENST00000567712 FOXN1O15353 648 aa30.23■■■□□ 2.43
CNEP1R1-209ENST00000567712 EIF2S2P20042 333 aaKnown RBP30.23■■■□□ 2.43
CNEP1R1-209ENST00000567712 CRAMP1Q96RY5 1269 aa30.23■■■□□ 2.43
CNEP1R1-209ENST00000567712 CC2D2BQ6DHV5 1058 aa30.22■■■□□ 2.43
CNEP1R1-209ENST00000567712 CNTROBQ8N137 903 aa30.22■■■□□ 2.43
CNEP1R1-209ENST00000567712 JDP2Q8WYK2 163 aa30.22■■■□□ 2.43
CNEP1R1-209ENST00000567712 GJA3Q9Y6H8 435 aa30.22■■■□□ 2.43
CNEP1R1-209ENST00000567712 ERBB4Q15303 1308 aa30.22■■■□□ 2.43
CNEP1R1-209ENST00000567712 PPEF1O14829 653 aaPredicted RBP30.21■■■□□ 2.43
CNEP1R1-209ENST00000567712 RIPK4P57078 832 aa30.21■■■□□ 2.43
CNEP1R1-209ENST00000567712 RBM17Q96I25 401 aaKnown RBP30.21■■■□□ 2.43
CNEP1R1-209ENST00000567712 ANKRD36CQ5JPF3 1778 aa30.2■■■□□ 2.43
CNEP1R1-209ENST00000567712 TAF1P21675 1872 aa30.2■■■□□ 2.42
CNEP1R1-209ENST00000567712 FMR1Q06787 632 aaKnown RBP eCLIP30.19■■■□□ 2.42
CNEP1R1-209ENST00000567712 PNMA8AQ86V59 439 aaPredicted RBP30.19■■■□□ 2.42
CNEP1R1-209ENST00000567712 EPS15P42566 896 aa30.18■■■□□ 2.42
CNEP1R1-209ENST00000567712 SCNN1DP51172 638 aa30.18■■■□□ 2.42
CNEP1R1-209ENST00000567712 EIF6P56537 245 aaKnown RBP30.18■■■□□ 2.42
CNEP1R1-209ENST00000567712 LARGE2Q8N3Y3 721 aa30.18■■■□□ 2.42
CNEP1R1-209ENST00000567712 PNNQ9H307 717 aaKnown RBP30.18■■■□□ 2.42
CNEP1R1-209ENST00000567712 PPP1R42Q7Z4L9 355 aa30.17■■■□□ 2.42
CNEP1R1-209ENST00000567712 NECTIN2Q92692 538 aa30.17■■■□□ 2.42
CNEP1R1-209ENST00000567712 TMPOP42166 694 aaKnown RBP30.16■■■□□ 2.42
CNEP1R1-209ENST00000567712 PARP10Q53GL7 1025 aa30.16■■■□□ 2.42
CNEP1R1-209ENST00000567712 SLC10A5Q5PT55 438 aa30.16■■■□□ 2.42
CNEP1R1-209ENST00000567712 KRT24Q2M2I5 525 aa30.15■■■□□ 2.42
CNEP1R1-209ENST00000567712 UTP14AQ9BVJ6 771 aaKnown RBP30.15■■■□□ 2.42
CNEP1R1-209ENST00000567712 NLRP3Q96P20 1036 aa30.14■■■□□ 2.42
CNEP1R1-209ENST00000567712 ABCC4O15439 1325 aa30.14■■■□□ 2.42
CNEP1R1-209ENST00000567712 RASSF10A6NK89 507 aa30.13■■■□□ 2.41
CNEP1R1-209ENST00000567712 AOC3Q16853 763 aa30.13■■■□□ 2.41
CNEP1R1-209ENST00000567712 COPS6Q7L5N1 327 aa30.13■■■□□ 2.41
CNEP1R1-209ENST00000567712 ATP6V0A2Q9Y487 856 aa30.13■■■□□ 2.41
CNEP1R1-209ENST00000567712 GRIPAP1Q4V328 841 aa30.12■■■□□ 2.41
CNEP1R1-209ENST00000567712 TRPM7Q96QT4 1865 aa30.12■■■□□ 2.41
CNEP1R1-209ENST00000567712 PPIP5K2O43314 1243 aa30.11■■■□□ 2.41
CNEP1R1-209ENST00000567712 AIMP1Q12904 312 aaKnown RBP30.11■■■□□ 2.41
CNEP1R1-209ENST00000567712 XAGE3Q8WTP9 111 aa30.11■■■□□ 2.41
CNEP1R1-209ENST00000567712 ZNF428Q96B54 188 aa30.11■■■□□ 2.41
CNEP1R1-209ENST00000567712 DDX21Q9NR30 783 aaKnown RBP eCLIP30.11■■■□□ 2.41
CNEP1R1-209ENST00000567712 WBP1LQ9NX94 342 aa30.11■■■□□ 2.41
CNEP1R1-209ENST00000567712 HCLS1P14317 486 aaPredicted RBP30.1■■■□□ 2.41
CNEP1R1-209ENST00000567712 DEFB115Q30KQ5 88 aa30.1■■■□□ 2.41
CNEP1R1-209ENST00000567712 NLRP10Q86W26 655 aa30.1■■■□□ 2.41
CNEP1R1-209ENST00000567712 NIM1KQ8IY84 436 aa30.1■■■□□ 2.41
CNEP1R1-209ENST00000567712 CCDC146Q8IYE0 955 aa30.1■■■□□ 2.41
CNEP1R1-209ENST00000567712 BABAM1Q9NWV8 329 aa30.1■■■□□ 2.41
CNEP1R1-209ENST00000567712 LMOD1P29536 600 aaPredicted RBP30.09■■■□□ 2.41
CNEP1R1-209ENST00000567712 RALBP1Q15311 655 aa30.08■■■□□ 2.41
CNEP1R1-209ENST00000567712 NEUROD2Q15784 382 aa30.08■■■□□ 2.41
CNEP1R1-209ENST00000567712 TRAF5O00463 557 aa30.07■■■□□ 2.4
CNEP1R1-209ENST00000567712 RTFDC1Q9BY42 306 aaPredicted RBP30.07■■■□□ 2.4
CNEP1R1-209ENST00000567712 PRDM10Q9NQV6 1147 aa30.07■■■□□ 2.4
CNEP1R1-209ENST00000567712 WDR33Q9C0J8 1336 aaKnown RBP30.06■■■□□ 2.4
CNEP1R1-209ENST00000567712 DDX60Q8IY21 1712 aaKnown RBP30.06■■■□□ 2.4
CNEP1R1-209ENST00000567712 CXCL9Q07325 125 aa30.06■■■□□ 2.4
CNEP1R1-209ENST00000567712 TRIM35Q9UPQ4 493 aa30.06■■■□□ 2.4
CNEP1R1-209ENST00000567712 CHL1O00533 1208 aa30.05■■■□□ 2.4
CNEP1R1-209ENST00000567712 CTCFP49711 727 aaPredicted RBP30.05■■■□□ 2.4
CNEP1R1-209ENST00000567712 TCIRG1Q13488 830 aa30.05■■■□□ 2.4
CNEP1R1-209ENST00000567712 CST9Q5W186 159 aa30.05■■■□□ 2.4
CNEP1R1-209ENST00000567712 ABT1Q9ULW3 272 aaKnown RBP30.05■■■□□ 2.4
CNEP1R1-209ENST00000567712 LBX1P52954 281 aa30.04■■■□□ 2.4
CNEP1R1-209ENST00000567712 USP50Q70EL3 339 aaPredicted RBP30.04■■■□□ 2.4
CNEP1R1-209ENST00000567712 SP8Q8IXZ3 490 aa30.04■■■□□ 2.4
CNEP1R1-209ENST00000567712 GPRC5DQ9NZD1 345 aa30.04■■■□□ 2.4
CNEP1R1-209ENST00000567712 AIDAQ96BJ3 306 aa30.03■■■□□ 2.4
CNEP1R1-209ENST00000567712 COL4A1P02462 1669 aa30.03■■■□□ 2.4
CNEP1R1-209ENST00000567712 DUOX1Q9NRD9 1551 aa30.03■■■□□ 2.4
CNEP1R1-209ENST00000567712 LMOD3Q0VAK6 560 aa30.02■■■□□ 2.4
CNEP1R1-209ENST00000567712 HSP90AB3PQ58FF7 597 aa30.02■■■□□ 2.4
CNEP1R1-209ENST00000567712 CHPF2Q9P2E5 772 aa30.02■■■□□ 2.4
CNEP1R1-209ENST00000567712 TRMT112Q9UI30 125 aaKnown RBP30.02■■■□□ 2.4
CNEP1R1-209ENST00000567712 ZNRF3Q9ULT6 936 aa30.02■■■□□ 2.4
CNEP1R1-209ENST00000567712 THSD7BQ9C0I4 1608 aa30.01■■■□□ 2.39
CNEP1R1-209ENST00000567712 BBOX1O75936 387 aa30.01■■■□□ 2.39
CNEP1R1-209ENST00000567712 MPNDQ8N594 471 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms