RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 EPHX2P34913 555 aa21.71■■□□□ 1.07
TSR3-202ENST00000566296 LMOD3Q0VAK6 560 aa21.71■■□□□ 1.07
TSR3-202ENST00000566296 GRIPAP1Q4V328 841 aa21.71■■□□□ 1.07
TSR3-202ENST00000566296 PARP10Q53GL7 1025 aa21.71■■□□□ 1.07
TSR3-202ENST00000566296 SUSD4Q5VX71 490 aa21.71■■□□□ 1.07
TSR3-202ENST00000566296 GIGYF2Q6Y7W6 1299 aaKnown RBP21.71■■□□□ 1.07
TSR3-202ENST00000566296 RBM17Q96I25 401 aaKnown RBP21.71■■□□□ 1.07
TSR3-202ENST00000566296 CLEC11AQ9Y240 323 aa21.71■■□□□ 1.07
TSR3-202ENST00000566296 PASKQ96RG2 1323 aa21.71■■□□□ 1.07
TSR3-202ENST00000566296 EIF6P56537 245 aaKnown RBP21.7■■□□□ 1.06
TSR3-202ENST00000566296 RIPK4P57078 832 aa21.7■■□□□ 1.06
TSR3-202ENST00000566296 RALBP1Q15311 655 aa21.7■■□□□ 1.06
TSR3-202ENST00000566296 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
TSR3-202ENST00000566296 ZNF34Q8IZ26 560 aa21.7■■□□□ 1.06
TSR3-202ENST00000566296 PCNTO95613 3336 aa21.7■■□□□ 1.06
TSR3-202ENST00000566296 RNF123Q5XPI4 1314 aa21.7■■□□□ 1.06
TSR3-202ENST00000566296 ADAMTSL1Q8N6G6 1762 aa21.69■■□□□ 1.06
TSR3-202ENST00000566296 PPEF1O14829 653 aaPredicted RBP21.69■■□□□ 1.06
TSR3-202ENST00000566296 NTSR2O95665 410 aa21.69■■□□□ 1.06
TSR3-202ENST00000566296 EIF2S2P20042 333 aaKnown RBP21.69■■□□□ 1.06
TSR3-202ENST00000566296 HOXA10P31260 410 aaPredicted RBP21.69■■□□□ 1.06
TSR3-202ENST00000566296 PNMA8AQ86V59 439 aaPredicted RBP21.69■■□□□ 1.06
TSR3-202ENST00000566296 GPC2Q8N158 579 aa21.69■■□□□ 1.06
TSR3-202ENST00000566296 CNTNAP1P78357 1384 aa21.69■■□□□ 1.06
TSR3-202ENST00000566296 CRAMP1Q96RY5 1269 aa21.68■■□□□ 1.06
TSR3-202ENST00000566296 TMX4Q9H1E5 349 aaPredicted RBP21.68■■□□□ 1.06
TSR3-202ENST00000566296 BABAM1Q9NWV8 329 aa21.68■■□□□ 1.06
TSR3-202ENST00000566296 ANKRD36CQ5JPF3 1778 aa21.68■■□□□ 1.06
TSR3-202ENST00000566296 TMEM88BA6NKF7 163 aa21.66■■□□□ 1.06
TSR3-202ENST00000566296 LMOD1P29536 600 aaPredicted RBP21.66■■□□□ 1.06
TSR3-202ENST00000566296 LARGE2Q8N3Y3 721 aa21.66■■□□□ 1.06
TSR3-202ENST00000566296 NLRP3Q96P20 1036 aa21.66■■□□□ 1.06
TSR3-202ENST00000566296 UTP14AQ9BVJ6 771 aaKnown RBP21.66■■□□□ 1.06
TSR3-202ENST00000566296 GJA3Q9Y6H8 435 aa21.66■■□□□ 1.06
TSR3-202ENST00000566296 HSP90AB3PQ58FF7 597 aa21.65■■□□□ 1.06
TSR3-202ENST00000566296 COL4A5P29400 1685 aa21.65■■□□□ 1.06
TSR3-202ENST00000566296 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
TSR3-202ENST00000566296 CAPN15O75808 1086 aa21.64■■□□□ 1.05
TSR3-202ENST00000566296 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
TSR3-202ENST00000566296 NIM1KQ8IY84 436 aa21.64■■□□□ 1.05
TSR3-202ENST00000566296 ITGBL1O95965 494 aaPredicted RBP21.63■■□□□ 1.05
TSR3-202ENST00000566296 ANXA1P04083 346 aa21.63■■□□□ 1.05
TSR3-202ENST00000566296 PDIA6Q15084 440 aa21.63■■□□□ 1.05
TSR3-202ENST00000566296 PROSER3Q2NL68 480 aa21.63■■□□□ 1.05
TSR3-202ENST00000566296 LRP10Q7Z4F1 713 aa21.63■■□□□ 1.05
TSR3-202ENST00000566296 PPIP5K2O43314 1243 aa21.62■■□□□ 1.05
TSR3-202ENST00000566296 C3orf67Q6ZVT6 689 aa21.62■■□□□ 1.05
TSR3-202ENST00000566296 CNTROBQ8N137 903 aa21.62■■□□□ 1.05
TSR3-202ENST00000566296 MYBBP1AQ9BQG0 1328 aaKnown RBP21.61■■□□□ 1.05
TSR3-202ENST00000566296 MAP1SQ66K74 1059 aaPredicted RBP21.61■■□□□ 1.05
TSR3-202ENST00000566296 NECTIN2Q92692 538 aa21.61■■□□□ 1.05
TSR3-202ENST00000566296 AIDAQ96BJ3 306 aa21.61■■□□□ 1.05
TSR3-202ENST00000566296 LAMB2P55268 1798 aa21.61■■□□□ 1.05
TSR3-202ENST00000566296 LTBP1Q14766 1721 aa21.6■■□□□ 1.05
TSR3-202ENST00000566296 ABCC4O15439 1325 aa21.6■■□□□ 1.05
TSR3-202ENST00000566296 AIMP1Q12904 312 aaKnown RBP21.6■■□□□ 1.05
TSR3-202ENST00000566296 SLC10A5Q5PT55 438 aa21.6■■□□□ 1.05
TSR3-202ENST00000566296 ATP6V0A2Q9Y487 856 aa21.6■■□□□ 1.05
TSR3-202ENST00000566296 NEUROD2Q15784 382 aa21.59■■□□□ 1.05
TSR3-202ENST00000566296 COPS6Q7L5N1 327 aa21.59■■□□□ 1.05
TSR3-202ENST00000566296 CCDC146Q8IYE0 955 aa21.59■■□□□ 1.05
TSR3-202ENST00000566296 SUPT20HQ8NEM7 779 aa21.59■■□□□ 1.05
TSR3-202ENST00000566296 XAGE3Q8WTP9 111 aa21.59■■□□□ 1.05
TSR3-202ENST00000566296 VEGFBP49765 207 aa21.58■■□□□ 1.05
TSR3-202ENST00000566296 SCNN1DP51172 638 aa21.58■■□□□ 1.05
TSR3-202ENST00000566296 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.05
TSR3-202ENST00000566296 SLC51AQ86UW1 340 aa21.58■■□□□ 1.05
TSR3-202ENST00000566296 VPS33BQ9H267 617 aa21.58■■□□□ 1.05
TSR3-202ENST00000566296 AOC3Q16853 763 aa21.57■■□□□ 1.04
TSR3-202ENST00000566296 NLRP10Q86W26 655 aa21.57■■□□□ 1.04
TSR3-202ENST00000566296 DDX21Q9NR30 783 aaKnown RBP eCLIP21.57■■□□□ 1.04
TSR3-202ENST00000566296 ABT1Q9ULW3 272 aaKnown RBP21.57■■□□□ 1.04
TSR3-202ENST00000566296 RASSF10A6NK89 507 aa21.56■■□□□ 1.04
TSR3-202ENST00000566296 TCIRG1Q13488 830 aa21.56■■□□□ 1.04
TSR3-202ENST00000566296 DDX46Q7L014 1031 aaKnown RBP21.56■■□□□ 1.04
TSR3-202ENST00000566296 TRMT112Q9UI30 125 aaKnown RBP21.56■■□□□ 1.04
TSR3-202ENST00000566296 LAS1LQ9Y4W2 734 aaKnown RBP21.56■■□□□ 1.04
TSR3-202ENST00000566296 SH3TC1Q8TE82 1336 aa21.55■■□□□ 1.04
TSR3-202ENST00000566296 FOXN1O15353 648 aa21.55■■□□□ 1.04
TSR3-202ENST00000566296 BBOX1O75936 387 aa21.55■■□□□ 1.04
TSR3-202ENST00000566296 HCLS1P14317 486 aaPredicted RBP21.55■■□□□ 1.04
TSR3-202ENST00000566296 EPS15P42566 896 aa21.55■■□□□ 1.04
TSR3-202ENST00000566296 DPP8Q6V1X1 898 aaPredicted RBP21.55■■□□□ 1.04
TSR3-202ENST00000566296 USP50Q70EL3 339 aaPredicted RBP21.55■■□□□ 1.04
TSR3-202ENST00000566296 RUNDC1Q96C34 613 aa21.55■■□□□ 1.04
TSR3-202ENST00000566296 TRPM7Q96QT4 1865 aa21.54■■□□□ 1.04
TSR3-202ENST00000566296 CHL1O00533 1208 aa21.54■■□□□ 1.04
TSR3-202ENST00000566296 CTCFP49711 727 aaPredicted RBP21.54■■□□□ 1.04
TSR3-202ENST00000566296 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
TSR3-202ENST00000566296 DEFB115Q30KQ5 88 aa21.54■■□□□ 1.04
TSR3-202ENST00000566296 CHPF2Q9P2E5 772 aa21.54■■□□□ 1.04
TSR3-202ENST00000566296 GRAPQ13588 217 aa21.53■■□□□ 1.04
TSR3-202ENST00000566296 KRT24Q2M2I5 525 aa21.53■■□□□ 1.04
TSR3-202ENST00000566296 HDGFL1Q5TGJ6 251 aa21.53■■□□□ 1.04
TSR3-202ENST00000566296 SP8Q8IXZ3 490 aa21.53■■□□□ 1.04
TSR3-202ENST00000566296 MPNDQ8N594 471 aa21.53■■□□□ 1.04
TSR3-202ENST00000566296 GRAPLQ8TC17 118 aaPredicted RBP21.53■■□□□ 1.04
TSR3-202ENST00000566296 RTFDC1Q9BY42 306 aaPredicted RBP21.53■■□□□ 1.04
TSR3-202ENST00000566296 PRDM10Q9NQV6 1147 aa21.53■■□□□ 1.04
TSR3-202ENST00000566296 ZNRF3Q9ULT6 936 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms