RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 PROSER3Q2NL68 480 aa24.76■■□□□ 1.55
SPSB3-207ENST00000565550 ADAMTS8Q9UP79 889 aa24.76■■□□□ 1.55
SPSB3-207ENST00000565550 IBTKQ9P2D0 1353 aaPredicted RBP24.76■■□□□ 1.55
SPSB3-207ENST00000565550 IQCA1LA6NCM1 817 aa24.75■■□□□ 1.55
SPSB3-207ENST00000565550 HOXA10P31260 410 aaPredicted RBP24.75■■□□□ 1.55
SPSB3-207ENST00000565550 WDR43Q15061 677 aaKnown RBP eCLIP24.75■■□□□ 1.55
SPSB3-207ENST00000565550 L3MBTL3Q96JM7 780 aaPredicted RBP24.75■■□□□ 1.55
SPSB3-207ENST00000565550 ZNF541Q9H0D2 1346 aa24.75■■□□□ 1.55
SPSB3-207ENST00000565550 PPP1R42Q7Z4L9 355 aa24.74■■□□□ 1.55
SPSB3-207ENST00000565550 NECTIN2Q92692 538 aa24.74■■□□□ 1.55
SPSB3-207ENST00000565550 PARP10Q53GL7 1025 aa24.73■■□□□ 1.55
SPSB3-207ENST00000565550 CC2D2BQ6DHV5 1058 aa24.73■■□□□ 1.55
SPSB3-207ENST00000565550 C3orf67Q6ZVT6 689 aa24.73■■□□□ 1.55
SPSB3-207ENST00000565550 PSMD1Q99460 953 aa24.73■■□□□ 1.55
SPSB3-207ENST00000565550 TAF1DQ9H5J8 278 aaPredicted RBP24.73■■□□□ 1.55
SPSB3-207ENST00000565550 RIC1Q4ADV7 1423 aa24.72■■□□□ 1.55
SPSB3-207ENST00000565550 RBM17Q96I25 401 aaKnown RBP24.72■■□□□ 1.55
SPSB3-207ENST00000565550 CRAMP1Q96RY5 1269 aa24.72■■□□□ 1.55
SPSB3-207ENST00000565550 SNED1Q8TER0 1413 aa24.71■■□□□ 1.55
SPSB3-207ENST00000565550 FZD9O00144 591 aa24.71■■□□□ 1.55
SPSB3-207ENST00000565550 CHL1O00533 1208 aa24.71■■□□□ 1.55
SPSB3-207ENST00000565550 AIMP1Q12904 312 aaKnown RBP24.71■■□□□ 1.55
SPSB3-207ENST00000565550 COPS6Q7L5N1 327 aa24.71■■□□□ 1.55
SPSB3-207ENST00000565550 RUNDC1Q96C34 613 aa24.71■■□□□ 1.55
SPSB3-207ENST00000565550 UTP14AQ9BVJ6 771 aaKnown RBP24.71■■□□□ 1.55
SPSB3-207ENST00000565550 TRIM35Q9UPQ4 493 aa24.71■■□□□ 1.55
SPSB3-207ENST00000565550 TCERG1O14776 1098 aaKnown RBP24.7■■□□□ 1.54
SPSB3-207ENST00000565550 KRT24Q2M2I5 525 aa24.7■■□□□ 1.54
SPSB3-207ENST00000565550 LDHDQ86WU2 507 aa24.7■■□□□ 1.54
SPSB3-207ENST00000565550 NLRP3Q96P20 1036 aa24.7■■□□□ 1.54
SPSB3-207ENST00000565550 LAS1LQ9Y4W2 734 aaKnown RBP24.7■■□□□ 1.54
SPSB3-207ENST00000565550 SLC10A5Q5PT55 438 aa24.69■■□□□ 1.54
SPSB3-207ENST00000565550 SLC51AQ86UW1 340 aa24.69■■□□□ 1.54
SPSB3-207ENST00000565550 XAGE3Q8WTP9 111 aa24.69■■□□□ 1.54
SPSB3-207ENST00000565550 JDP2Q8WYK2 163 aa24.69■■□□□ 1.54
SPSB3-207ENST00000565550 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
SPSB3-207ENST00000565550 HACL1Q9UJ83 578 aa24.69■■□□□ 1.54
SPSB3-207ENST00000565550 PPEF1O14829 653 aaPredicted RBP24.68■■□□□ 1.54
SPSB3-207ENST00000565550 EAPPQ56P03 285 aaPredicted RBP24.68■■□□□ 1.54
SPSB3-207ENST00000565550 GRIPAP1Q4V328 841 aa24.67■■□□□ 1.54
SPSB3-207ENST00000565550 DDX21Q9NR30 783 aaKnown RBP eCLIP24.67■■□□□ 1.54
SPSB3-207ENST00000565550 CREBZFQ9NS37 354 aa24.67■■□□□ 1.54
SPSB3-207ENST00000565550 EPHX2P34913 555 aa24.66■■□□□ 1.54
SPSB3-207ENST00000565550 HSP90AB3PQ58FF7 597 aa24.66■■□□□ 1.54
SPSB3-207ENST00000565550 GPC2Q8N158 579 aa24.66■■□□□ 1.54
SPSB3-207ENST00000565550 RNF123Q5XPI4 1314 aa24.65■■□□□ 1.54
SPSB3-207ENST00000565550 NLRP10Q86W26 655 aa24.65■■□□□ 1.54
SPSB3-207ENST00000565550 CLEC11AQ9Y240 323 aa24.65■■□□□ 1.54
SPSB3-207ENST00000565550 SCN4AP35499 1836 aa24.64■■□□□ 1.54
SPSB3-207ENST00000565550 EIF6P56537 245 aaKnown RBP24.64■■□□□ 1.54
SPSB3-207ENST00000565550 TCIRG1Q13488 830 aa24.64■■□□□ 1.54
SPSB3-207ENST00000565550 COL13A1Q5TAT6 717 aaPredicted RBP24.64■■□□□ 1.54
SPSB3-207ENST00000565550 LARGE2Q8N3Y3 721 aa24.64■■□□□ 1.54
SPSB3-207ENST00000565550 PASKQ96RG2 1323 aa24.63■■□□□ 1.53
SPSB3-207ENST00000565550 CHPF2Q9P2E5 772 aa24.63■■□□□ 1.53
SPSB3-207ENST00000565550 MKRN1Q9UHC7 482 aaKnown RBP24.63■■□□□ 1.53
SPSB3-207ENST00000565550 GJA3Q9Y6H8 435 aa24.63■■□□□ 1.53
SPSB3-207ENST00000565550 ITGBL1O95965 494 aaPredicted RBP24.62■■□□□ 1.53
SPSB3-207ENST00000565550 HSPA1AP0DMV8 641 aaKnown RBP24.62■■□□□ 1.53
SPSB3-207ENST00000565550 HSPA1BP0DMV9 641 aaKnown RBP24.62■■□□□ 1.53
SPSB3-207ENST00000565550 HCLS1P14317 486 aaPredicted RBP24.62■■□□□ 1.53
SPSB3-207ENST00000565550 PNMA8AQ86V59 439 aaPredicted RBP24.62■■□□□ 1.53
SPSB3-207ENST00000565550 TMX4Q9H1E5 349 aaPredicted RBP24.62■■□□□ 1.53
SPSB3-207ENST00000565550 TRMT112Q9UI30 125 aaKnown RBP24.62■■□□□ 1.53
SPSB3-207ENST00000565550 ATP6V0A2Q9Y487 856 aa24.62■■□□□ 1.53
SPSB3-207ENST00000565550 ABCC4O15439 1325 aa24.61■■□□□ 1.53
SPSB3-207ENST00000565550 HDGFL1Q5TGJ6 251 aa24.61■■□□□ 1.53
SPSB3-207ENST00000565550 COL4A5P29400 1685 aa24.61■■□□□ 1.53
SPSB3-207ENST00000565550 ZNF428Q96B54 188 aa24.6■■□□□ 1.53
SPSB3-207ENST00000565550 PCNTO95613 3336 aa24.6■■□□□ 1.53
SPSB3-207ENST00000565550 CFAP44Q96MT7 982 aa24.59■■□□□ 1.53
SPSB3-207ENST00000565550 SH3TC1Q8TE82 1336 aa24.59■■□□□ 1.53
SPSB3-207ENST00000565550 PPIP5K2O43314 1243 aa24.58■■□□□ 1.53
SPSB3-207ENST00000565550 BBOX1O75936 387 aa24.58■■□□□ 1.53
SPSB3-207ENST00000565550 HOXB7P09629 217 aa24.58■■□□□ 1.53
SPSB3-207ENST00000565550 AOC3Q16853 763 aa24.58■■□□□ 1.53
SPSB3-207ENST00000565550 MAP1SQ66K74 1059 aaPredicted RBP24.58■■□□□ 1.53
SPSB3-207ENST00000565550 NIM1KQ8IY84 436 aa24.58■■□□□ 1.53
SPSB3-207ENST00000565550 CNTROBQ8N137 903 aa24.58■■□□□ 1.53
SPSB3-207ENST00000565550 PLBD2Q8NHP8 589 aa24.58■■□□□ 1.53
SPSB3-207ENST00000565550 DBF4Q9UBU7 674 aaPredicted RBP24.58■■□□□ 1.53
SPSB3-207ENST00000565550 TMEM88BA6NKF7 163 aa24.57■■□□□ 1.52
SPSB3-207ENST00000565550 APAF1O14727 1248 aa24.57■■□□□ 1.52
SPSB3-207ENST00000565550 DUSP27Q5VZP5 1158 aa24.57■■□□□ 1.52
SPSB3-207ENST00000565550 ANKRD13DQ6ZTN6 518 aa24.57■■□□□ 1.52
SPSB3-207ENST00000565550 LMOD1P29536 600 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-207ENST00000565550 SCNN1DP51172 638 aa24.56■■□□□ 1.52
SPSB3-207ENST00000565550 DDX46Q7L014 1031 aaKnown RBP24.56■■□□□ 1.52
SPSB3-207ENST00000565550 SP8Q8IXZ3 490 aa24.56■■□□□ 1.52
SPSB3-207ENST00000565550 VPS33BQ9H267 617 aa24.56■■□□□ 1.52
SPSB3-207ENST00000565550 MBIPQ9NS73 344 aa24.56■■□□□ 1.52
SPSB3-207ENST00000565550 EPS15P42566 896 aa24.55■■□□□ 1.52
SPSB3-207ENST00000565550 RTFDC1Q9BY42 306 aaPredicted RBP24.55■■□□□ 1.52
SPSB3-207ENST00000565550 CNTNAP1P78357 1384 aa24.54■■□□□ 1.52
SPSB3-207ENST00000565550 DPP8Q6V1X1 898 aaPredicted RBP24.54■■□□□ 1.52
SPSB3-207ENST00000565550 MPNDQ8N594 471 aa24.54■■□□□ 1.52
SPSB3-207ENST00000565550 SUPT20HQ8NEM7 779 aa24.54■■□□□ 1.52
SPSB3-207ENST00000565550 ISCA1Q9BUE6 129 aa24.54■■□□□ 1.52
SPSB3-207ENST00000565550 ATP5J2-PTCD1G3V325 749 aa24.53■■□□□ 1.52
SPSB3-207ENST00000565550 GRAPQ13588 217 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms