RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 NUP62CLQ9H1M0 184 aa22.29■■□□□ 1.16
IFT140-206ENST00000565298 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
IFT140-206ENST00000565298 GNPATO15228 680 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 PPFIBP1Q86W92 1011 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 STK32BQ9NY57 414 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 CCDC178Q5BJE1 867 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 FERMT3Q86UX7 667 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 EYA3Q99504 573 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 COL17A1Q9UMD9 1497 aaPredicted RBP22.28■■□□□ 1.16
IFT140-206ENST00000565298 VAMP4O75379 141 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 HOXB7P09629 217 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 TMEM67Q5HYA8 995 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
IFT140-206ENST00000565298 LTKP29376 864 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 SSRP1Q08945 709 aaKnown RBP22.28■■□□□ 1.16
IFT140-206ENST00000565298 JDP2Q8WYK2 163 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 KAT14Q9H8E8 782 aa22.28■■□□□ 1.16
IFT140-206ENST00000565298 CYP7A1P22680 504 aa22.27■■□□□ 1.16
IFT140-206ENST00000565298 PARP10Q53GL7 1025 aa22.27■■□□□ 1.16
IFT140-206ENST00000565298 TXLNBQ8N3L3 684 aa22.27■■□□□ 1.16
IFT140-206ENST00000565298 TMEM266Q2M3C6 531 aa22.27■■□□□ 1.16
IFT140-206ENST00000565298 ZNF790Q6PG37 636 aa22.27■■□□□ 1.16
IFT140-206ENST00000565298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.27■■□□□ 1.168e-7■■■■■ 178.5
IFT140-206ENST00000565298 NSFL1CQ9UNZ2 370 aaKnown RBP22.27■■□□□ 1.16
IFT140-206ENST00000565298 CFAP74Q9C0B2 1584 aa22.27■■□□□ 1.16
IFT140-206ENST00000565298 ANKRD2Q9GZV1 360 aa22.27■■□□□ 1.16
IFT140-206ENST00000565298 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
IFT140-206ENST00000565298 NLRP5P59047 1200 aa22.26■■□□□ 1.15
IFT140-206ENST00000565298 TTC22Q5TAA0 569 aa22.26■■□□□ 1.15
IFT140-206ENST00000565298 NAA16Q6N069 864 aaPredicted RBP22.26■■□□□ 1.15
IFT140-206ENST00000565298 PAF1Q8N7H5 531 aa22.26■■□□□ 1.15
IFT140-206ENST00000565298 CBFA2T2O43439 604 aa22.25■■□□□ 1.15
IFT140-206ENST00000565298 IARSP41252 1262 aaKnown RBP22.25■■□□□ 1.15
IFT140-206ENST00000565298 YEATS2Q9ULM3 1422 aa22.25■■□□□ 1.15
IFT140-206ENST00000565298 PPP1R12BO60237 982 aaPredicted RBP22.25■■□□□ 1.15
IFT140-206ENST00000565298 CDR1P51861 262 aa22.25■■□□□ 1.15
IFT140-206ENST00000565298 PPP4R3AQ6IN85 833 aa22.25■■□□□ 1.15
IFT140-206ENST00000565298 NEK1Q96PY6 1258 aa22.25■■□□□ 1.15
IFT140-206ENST00000565298 MAGI2Q86UL8 1455 aa22.25■■□□□ 1.15
IFT140-206ENST00000565298 ARGLU1Q9NWB6 273 aaPredicted RBP22.24■■□□□ 1.15
IFT140-206ENST00000565298 PLCG2P16885 1265 aa22.24■■□□□ 1.15
IFT140-206ENST00000565298 TMTC2Q8N394 836 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 STX8Q9UNK0 236 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 USP16Q9Y5T5 823 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 PER1O15534 1290 aaPredicted RBP22.23■■□□□ 1.15
IFT140-206ENST00000565298 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.23■■□□□ 1.15
IFT140-206ENST00000565298 CAGE1Q8TC20 777 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 KRT23Q9C075 422 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 DEF6Q9H4E7 631 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 MCM5P33992 734 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 HAND2P61296 217 aa22.23■■□□□ 1.15
IFT140-206ENST00000565298 ESR2Q92731 530 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 RUFY1Q96T51 708 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 MYO6Q9UM54 1294 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 IL13P35225 146 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 TBC1D9Q6ZT07 1266 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 CNNM2Q9H8M5 875 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 USP21Q9UK80 565 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 IQSEC3Q9UPP2 1182 aaPredicted RBP22.22■■□□□ 1.15
IFT140-206ENST00000565298 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 CNBD1Q8NA66 436 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 ACBD3Q9H3P7 528 aa22.22■■□□□ 1.15
IFT140-206ENST00000565298 SMTNL1A8MU46 457 aa22.21■■□□□ 1.15
IFT140-206ENST00000565298 MATR3P43243 847 aaKnown RBP eCLIP22.21■■□□□ 1.15
IFT140-206ENST00000565298 BAG4O95429 457 aaKnown RBP22.21■■□□□ 1.15
IFT140-206ENST00000565298 PDE1AP54750 535 aa22.21■■□□□ 1.15
IFT140-206ENST00000565298 NUCB1Q02818 461 aa22.21■■□□□ 1.15
IFT140-206ENST00000565298 FAM98CQ17RN3 349 aaKnown RBP22.21■■□□□ 1.15
IFT140-206ENST00000565298 CWF19L2Q2TBE0 894 aaKnown RBP22.21■■□□□ 1.15
IFT140-206ENST00000565298 SLC9C2Q5TAH2 1124 aa22.21■■□□□ 1.15
IFT140-206ENST00000565298 TTLL5Q6EMB2 1281 aa22.2■■□□□ 1.14
IFT140-206ENST00000565298 TRIM21P19474 475 aaKnown RBP22.2■■□□□ 1.14
IFT140-206ENST00000565298 KIF20AO95235 890 aa22.2■■□□□ 1.14
IFT140-206ENST00000565298 MICU3Q86XE3 530 aa22.2■■□□□ 1.14
IFT140-206ENST00000565298 FAM43AQ8N2R8 423 aa22.2■■□□□ 1.14
IFT140-206ENST00000565298 TSPYL6Q8N831 410 aa22.2■■□□□ 1.14
IFT140-206ENST00000565298 PLBD2Q8NHP8 589 aa22.2■■□□□ 1.14
IFT140-206ENST00000565298 SCLT1Q96NL6 688 aa22.2■■□□□ 1.14
IFT140-206ENST00000565298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.2■■□□□ 1.14
IFT140-206ENST00000565298 NF2P35240 595 aa22.19■■□□□ 1.14
IFT140-206ENST00000565298 GNAQP50148 359 aa22.19■■□□□ 1.14
IFT140-206ENST00000565298 MAP3K11Q16584 847 aa22.19■■□□□ 1.14
IFT140-206ENST00000565298 MPHOSPH6Q99547 160 aaKnown RBP22.19■■□□□ 1.14
IFT140-206ENST00000565298 SLC4A4Q9Y6R1 1079 aa22.19■■□□□ 1.14
IFT140-206ENST00000565298 MCM4P33991 863 aa22.19■■□□□ 1.14
IFT140-206ENST00000565298 METAP2P50579 478 aaKnown RBP eCLIP22.19■■□□□ 1.14
IFT140-206ENST00000565298 CCT2P78371 535 aaKnown RBP22.19■■□□□ 1.14
IFT140-206ENST00000565298 ORC3Q9UBD5 711 aaPredicted RBP22.18■■□□□ 1.14
IFT140-206ENST00000565298 PRIM1P49642 420 aaKnown RBP22.18■■□□□ 1.14
IFT140-206ENST00000565298 WTAPQ15007 396 aa22.18■■□□□ 1.14
IFT140-206ENST00000565298 MCMDC2Q4G0Z9 681 aa22.18■■□□□ 1.14
IFT140-206ENST00000565298 NOM1Q5C9Z4 860 aaKnown RBP22.18■■□□□ 1.14
IFT140-206ENST00000565298 TTC41PQ6P2S7 1318 aa22.18■■□□□ 1.14
IFT140-206ENST00000565298 TSHZ3Q63HK5 1081 aa22.18■■□□□ 1.14
IFT140-206ENST00000565298 DNAI2Q9GZS0 605 aa22.18■■□□□ 1.14
IFT140-206ENST00000565298 F8W031 263 aaPredicted RBP22.18■■□□□ 1.14
IFT140-206ENST00000565298 SLC52A2Q9HAB3 445 aa22.18■■□□□ 1.14
IFT140-206ENST00000565298 ARHGEF5Q12774 1597 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms