RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 RPGRQ92834 1020 aaKnown RBP31.29■■■□□ 2.6
NME3-206ENST00000564252 RUNDC1Q96C34 613 aa31.29■■■□□ 2.6
NME3-206ENST00000564252 SCN4AP35499 1836 aa31.28■■■□□ 2.6
NME3-206ENST00000564252 ZNF541Q9H0D2 1346 aa31.28■■■□□ 2.6
NME3-206ENST00000564252 IARSP41252 1262 aaKnown RBP31.28■■■□□ 2.6
NME3-206ENST00000564252 PPP1R42Q7Z4L9 355 aa31.28■■■□□ 2.6
NME3-206ENST00000564252 PSMD1Q99460 953 aa31.28■■■□□ 2.6
NME3-206ENST00000564252 TRIM35Q9UPQ4 493 aa31.28■■■□□ 2.6
NME3-206ENST00000564252 CHL1O00533 1208 aa31.27■■■□□ 2.6
NME3-206ENST00000564252 WDR43Q15061 677 aaKnown RBP eCLIP31.27■■■□□ 2.6
NME3-206ENST00000564252 CHADLQ6NUI6 762 aa31.27■■■□□ 2.6
NME3-206ENST00000564252 IQCA1LA6NCM1 817 aa31.26■■■□□ 2.59
NME3-206ENST00000564252 CC2D2BQ6DHV5 1058 aa31.26■■■□□ 2.59
NME3-206ENST00000564252 C3orf67Q6ZVT6 689 aa31.26■■■□□ 2.59
NME3-206ENST00000564252 ANKRD36CQ5JPF3 1778 aa31.25■■■□□ 2.59
NME3-206ENST00000564252 KRT24Q2M2I5 525 aa31.25■■■□□ 2.59
NME3-206ENST00000564252 NECTIN2Q92692 538 aa31.25■■■□□ 2.59
NME3-206ENST00000564252 CRAMP1Q96RY5 1269 aa31.25■■■□□ 2.59
NME3-206ENST00000564252 ADAMTS8Q9UP79 889 aa31.25■■■□□ 2.59
NME3-206ENST00000564252 FZD9O00144 591 aa31.24■■■□□ 2.59
NME3-206ENST00000564252 RBM17Q96I25 401 aaKnown RBP31.24■■■□□ 2.59
NME3-206ENST00000564252 COPS6Q7L5N1 327 aa31.23■■■□□ 2.59
NME3-206ENST00000564252 UTP14AQ9BVJ6 771 aaKnown RBP31.23■■■□□ 2.59
NME3-206ENST00000564252 TAF1DQ9H5J8 278 aaPredicted RBP31.23■■■□□ 2.59
NME3-206ENST00000564252 SLC10A5Q5PT55 438 aa31.22■■■□□ 2.59
NME3-206ENST00000564252 SLC51AQ86UW1 340 aa31.22■■■□□ 2.59
NME3-206ENST00000564252 XAGE3Q8WTP9 111 aa31.22■■■□□ 2.59
NME3-206ENST00000564252 COL4A5P29400 1685 aa31.22■■■□□ 2.59
NME3-206ENST00000564252 AIMP1Q12904 312 aaKnown RBP31.21■■■□□ 2.59
NME3-206ENST00000564252 PRKRIP1Q9H875 184 aaPredicted RBP31.21■■■□□ 2.59
NME3-206ENST00000564252 DDX21Q9NR30 783 aaKnown RBP eCLIP31.21■■■□□ 2.59
NME3-206ENST00000564252 LAS1LQ9Y4W2 734 aaKnown RBP31.21■■■□□ 2.59
NME3-206ENST00000564252 PPEF1O14829 653 aaPredicted RBP31.2■■■□□ 2.59
NME3-206ENST00000564252 LDHDQ86WU2 507 aa31.2■■■□□ 2.59
NME3-206ENST00000564252 NLRP3Q96P20 1036 aa31.2■■■□□ 2.59
NME3-206ENST00000564252 GRIPAP1Q4V328 841 aa31.19■■■□□ 2.58
NME3-206ENST00000564252 HSP90AB3PQ58FF7 597 aa31.19■■■□□ 2.58
NME3-206ENST00000564252 RNF123Q5XPI4 1314 aa31.19■■■□□ 2.58
NME3-206ENST00000564252 NLRP10Q86W26 655 aa31.18■■■□□ 2.58
NME3-206ENST00000564252 JDP2Q8WYK2 163 aa31.18■■■□□ 2.58
NME3-206ENST00000564252 HACL1Q9UJ83 578 aa31.18■■■□□ 2.58
NME3-206ENST00000564252 CHPF2Q9P2E5 772 aa31.17■■■□□ 2.58
NME3-206ENST00000564252 LAMB2P55268 1798 aa31.17■■■□□ 2.58
NME3-206ENST00000564252 ADAMTSL1Q8N6G6 1762 aa31.16■■■□□ 2.58
NME3-206ENST00000564252 TCERG1O14776 1098 aaKnown RBP31.16■■■□□ 2.58
NME3-206ENST00000564252 GPC2Q8N158 579 aa31.16■■■□□ 2.58
NME3-206ENST00000564252 TCIRG1Q13488 830 aa31.15■■■□□ 2.58
NME3-206ENST00000564252 CREBZFQ9NS37 354 aa31.15■■■□□ 2.58
NME3-206ENST00000564252 PASKQ96RG2 1323 aa31.15■■■□□ 2.58
NME3-206ENST00000564252 HOXB7P09629 217 aa31.14■■■□□ 2.58
NME3-206ENST00000564252 EPHX2P34913 555 aa31.14■■■□□ 2.58
NME3-206ENST00000564252 ABCC4O15439 1325 aa31.14■■■□□ 2.58
NME3-206ENST00000564252 EAPPQ56P03 285 aaPredicted RBP31.13■■■□□ 2.57
NME3-206ENST00000564252 HDGFL1Q5TGJ6 251 aa31.13■■■□□ 2.57
NME3-206ENST00000564252 CFAP44Q96MT7 982 aa31.13■■■□□ 2.57
NME3-206ENST00000564252 HCLS1P14317 486 aaPredicted RBP31.12■■■□□ 2.57
NME3-206ENST00000564252 LARGE2Q8N3Y3 721 aa31.12■■■□□ 2.57
NME3-206ENST00000564252 ATP6V0A2Q9Y487 856 aa31.12■■■□□ 2.57
NME3-206ENST00000564252 EIF6P56537 245 aaKnown RBP31.11■■■□□ 2.57
NME3-206ENST00000564252 TRMT112Q9UI30 125 aaKnown RBP31.11■■■□□ 2.57
NME3-206ENST00000564252 SH3TC1Q8TE82 1336 aa31.09■■■□□ 2.57
NME3-206ENST00000564252 ITGBL1O95965 494 aaPredicted RBP31.09■■■□□ 2.57
NME3-206ENST00000564252 PNMA8AQ86V59 439 aaPredicted RBP31.09■■■□□ 2.57
NME3-206ENST00000564252 PLBD2Q8NHP8 589 aa31.09■■■□□ 2.57
NME3-206ENST00000564252 MBIPQ9NS73 344 aa31.09■■■□□ 2.57
NME3-206ENST00000564252 DBF4Q9UBU7 674 aaPredicted RBP31.09■■■□□ 2.57
NME3-206ENST00000564252 LTBP1Q14766 1721 aa31.09■■■□□ 2.57
NME3-206ENST00000564252 ZNF853P0CG23 659 aa31.08■■■□□ 2.57
NME3-206ENST00000564252 TMX4Q9H1E5 349 aaPredicted RBP31.08■■■□□ 2.57
NME3-206ENST00000564252 CLEC11AQ9Y240 323 aa31.08■■■□□ 2.57
NME3-206ENST00000564252 GJA3Q9Y6H8 435 aa31.08■■■□□ 2.57
NME3-206ENST00000564252 DUSP27Q5VZP5 1158 aa31.07■■■□□ 2.56
NME3-206ENST00000564252 PPIP5K2O43314 1243 aa31.06■■■□□ 2.56
NME3-206ENST00000564252 BBOX1O75936 387 aa31.06■■■□□ 2.56
NME3-206ENST00000564252 ANKRD13DQ6ZTN6 518 aa31.06■■■□□ 2.56
NME3-206ENST00000564252 MKRN1Q9UHC7 482 aaKnown RBP31.06■■■□□ 2.56
NME3-206ENST00000564252 DDX60Q8IY21 1712 aaKnown RBP31.06■■■□□ 2.56
NME3-206ENST00000564252 APAF1O14727 1248 aa31.05■■■□□ 2.56
NME3-206ENST00000564252 AOC3Q16853 763 aa31.05■■■□□ 2.56
NME3-206ENST00000564252 COL13A1Q5TAT6 717 aaPredicted RBP31.05■■■□□ 2.56
NME3-206ENST00000564252 SP8Q8IXZ3 490 aa31.05■■■□□ 2.56
NME3-206ENST00000564252 NIM1KQ8IY84 436 aa31.05■■■□□ 2.56
NME3-206ENST00000564252 ISCA1Q9BUE6 129 aa31.05■■■□□ 2.56
NME3-206ENST00000564252 RTFDC1Q9BY42 306 aaPredicted RBP31.05■■■□□ 2.56
NME3-206ENST00000564252 VPS33BQ9H267 617 aa31.05■■■□□ 2.56
NME3-206ENST00000564252 HSPA1AP0DMV8 641 aaKnown RBP31.04■■■□□ 2.56
NME3-206ENST00000564252 HSPA1BP0DMV9 641 aaKnown RBP31.04■■■□□ 2.56
NME3-206ENST00000564252 SCNN1DP51172 638 aa31.04■■■□□ 2.56
NME3-206ENST00000564252 DDX46Q7L014 1031 aaKnown RBP31.04■■■□□ 2.56
NME3-206ENST00000564252 ZNF428Q96B54 188 aa31.04■■■□□ 2.56
NME3-206ENST00000564252 HYPKQ9NX55 129 aa31.04■■■□□ 2.56
NME3-206ENST00000564252 TAF1P21675 1872 aa31.03■■■□□ 2.56
NME3-206ENST00000564252 CNTNAP1P78357 1384 aa31.03■■■□□ 2.56
NME3-206ENST00000564252 GRAPQ13588 217 aa31.02■■■□□ 2.56
NME3-206ENST00000564252 MAP1SQ66K74 1059 aaPredicted RBP31.02■■■□□ 2.56
NME3-206ENST00000564252 SUPT20HQ8NEM7 779 aa31.02■■■□□ 2.56
NME3-206ENST00000564252 GRAPLQ8TC17 118 aaPredicted RBP31.02■■■□□ 2.56
NME3-206ENST00000564252 IFT57Q9NWB7 429 aa31.02■■■□□ 2.56
NME3-206ENST00000564252 TMEM88BA6NKF7 163 aa31.01■■■□□ 2.55
NME3-206ENST00000564252 LMOD1P29536 600 aaPredicted RBP31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms