RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 CEP170Q5SW79 1584 aa7.16□□□□□ -1.26
CDR2-203ENST00000563573 ALAS2P22557 587 aa7.16□□□□□ -1.26
CDR2-203ENST00000563573 LRRC69Q6ZNQ3 347 aa7.16□□□□□ -1.26
CDR2-203ENST00000563573 SPOCK3Q9BQ16 436 aa7.16□□□□□ -1.26
CDR2-203ENST00000563573 NUP160Q12769 1436 aa7.16□□□□□ -1.26
CDR2-203ENST00000563573 CARMIL2Q6F5E8 1435 aa7.16□□□□□ -1.26
CDR2-203ENST00000563573 EFCAB5A4FU69 1503 aa7.16□□□□□ -1.26
CDR2-203ENST00000563573 DGKGP49619 791 aa7.15□□□□□ -1.26
CDR2-203ENST00000563573 POTEAQ6S8J7 498 aa7.15□□□□□ -1.26
CDR2-203ENST00000563573 CHSY3Q70JA7 882 aa7.15□□□□□ -1.26
CDR2-203ENST00000563573 STAG2Q8N3U4 1231 aa7.15□□□□□ -1.26
CDR2-203ENST00000563573 FNBP4Q8N3X1 1017 aaPredicted RBP7.15□□□□□ -1.26
CDR2-203ENST00000563573 GLMNQ92990 594 aa7.15□□□□□ -1.26
CDR2-203ENST00000563573 KIAA1024Q9UPX6 916 aa7.15□□□□□ -1.26
CDR2-203ENST00000563573 ELOA3CA0A087WX78 387 aaPredicted RBP7.14□□□□□ -1.27
CDR2-203ENST00000563573 A6NJR5 290 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 ELOA3DA6NLF2 546 aaPredicted RBP7.14□□□□□ -1.27
CDR2-203ENST00000563573 HOXB4P17483 251 aaPredicted RBP7.14□□□□□ -1.27
CDR2-203ENST00000563573 RASA1P20936 1047 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 SEC13P55735 322 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 PCBP4P57723 403 aaKnown RBP7.14□□□□□ -1.27
CDR2-203ENST00000563573 GRIN2CQ14957 1233 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 ELOA3BQ3SY89 546 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 TBCELQ5QJ74 424 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 LARP1Q6PKG0 1096 aaKnown RBP7.14□□□□□ -1.27
CDR2-203ENST00000563573 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 ELOA3Q8NG57 546 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 C7orf43Q8WVR3 580 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 TSPAN10Q9H1Z9 355 aaPredicted RBP7.14□□□□□ -1.27
CDR2-203ENST00000563573 UGGT2Q9NYU1 1516 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 TFIP11Q9UBB9 837 aaKnown RBP7.14□□□□□ -1.27
CDR2-203ENST00000563573 KLF15Q9UIH9 416 aa7.14□□□□□ -1.27
CDR2-203ENST00000563573 ARHGAP35Q9NRY4 1499 aa7.13□□□□□ -1.27
CDR2-203ENST00000563573 KRBA1A5PL33 1030 aa7.13□□□□□ -1.27
CDR2-203ENST00000563573 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
CDR2-203ENST00000563573 PPP1R12BO60237 982 aaPredicted RBP7.13□□□□□ -1.27
CDR2-203ENST00000563573 SIN3BO75182 1162 aa7.13□□□□□ -1.27
CDR2-203ENST00000563573 COL8A1P27658 744 aa7.13□□□□□ -1.27
CDR2-203ENST00000563573 CLUAP1Q96AJ1 413 aa7.13□□□□□ -1.27
CDR2-203ENST00000563573 ZNF594Q96JF6 807 aaPredicted RBP7.13□□□□□ -1.27
CDR2-203ENST00000563573 STRN4Q9NRL3 753 aa7.13□□□□□ -1.27
CDR2-203ENST00000563573 MAFBQ9Y5Q3 323 aaPredicted RBP7.13□□□□□ -1.27
CDR2-203ENST00000563573 SAMD9Q5K651 1589 aa7.12□□□□□ -1.27
CDR2-203ENST00000563573 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
CDR2-203ENST00000563573 SYT9Q86SS6 491 aa7.12□□□□□ -1.27
CDR2-203ENST00000563573 CALR3Q96L12 384 aaKnown RBP7.12□□□□□ -1.27
CDR2-203ENST00000563573 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
CDR2-203ENST00000563573 PHACTR1Q9C0D0 580 aa7.12□□□□□ -1.27
CDR2-203ENST00000563573 HCN2Q9UL51 889 aa7.12□□□□□ -1.27
CDR2-203ENST00000563573 HCN4Q9Y3Q4 1203 aa7.12□□□□□ -1.27
CDR2-203ENST00000563573 FMN1Q68DA7 1419 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 VPS8Q8N3P4 1428 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 ATAD2Q6PL18 1390 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 TTBK1Q5TCY1 1321 aaPredicted RBP7.11□□□□□ -1.27
CDR2-203ENST00000563573 SFI1A8K8P3 1242 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 ADARB2-AS1A8MUL3 147 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 PROCP04070 461 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 ITGB2P05107 769 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 KCNQ4P56696 695 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
CDR2-203ENST00000563573 CEP63Q96MT8 703 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 EFCC1Q9HA90 598 aa7.11□□□□□ -1.27
CDR2-203ENST00000563573 PRG4Q92954 1404 aaPredicted RBP7.1□□□□□ -1.27
CDR2-203ENST00000563573 DKK1O94907 266 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 SH3PXD2AQ5TCZ1 1133 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 TNFRSF25Q93038 417 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 PPP1R12CQ9BZL4 782 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 SUV39H2Q9H5I1 410 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 BRD7Q9NPI1 651 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 KCNH4Q9UQ05 1017 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 CLASP1Q7Z460 1538 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 ARAP1Q96P48 1450 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 FHOD3Q2V2M9 1422 aa7.1□□□□□ -1.27
CDR2-203ENST00000563573 KIAA0556O60303 1618 aa7.09□□□□□ -1.27
CDR2-203ENST00000563573 SHROOM2Q13796 1616 aa7.09□□□□□ -1.27
CDR2-203ENST00000563573 SPEM2Q0P670 501 aa7.09□□□□□ -1.27
CDR2-203ENST00000563573 SFSWAPQ12872 951 aaKnown RBP7.09□□□□□ -1.27
CDR2-203ENST00000563573 ALDH16A1Q8IZ83 802 aa7.09□□□□□ -1.27
CDR2-203ENST00000563573 SCG3Q8WXD2 468 aaKnown RBP7.09□□□□□ -1.27
CDR2-203ENST00000563573 SUSD3Q96L08 255 aa7.09□□□□□ -1.27
CDR2-203ENST00000563573 C2orf49Q9BVC5 232 aaPredicted RBP7.09□□□□□ -1.27
CDR2-203ENST00000563573 DISP1Q96F81 1524 aa7.09□□□□□ -1.27
CDR2-203ENST00000563573 FAM196BA6NMK8 535 aa7.08□□□□□ -1.28
CDR2-203ENST00000563573 C21orf2O43822 256 aa7.08□□□□□ -1.28
CDR2-203ENST00000563573 ADAM23O75077 832 aa7.08□□□□□ -1.28
CDR2-203ENST00000563573 MDFIQ99750 246 aa7.08□□□□□ -1.28
CDR2-203ENST00000563573 HINFPQ9BQA5 517 aa7.08□□□□□ -1.28
CDR2-203ENST00000563573 VRTNQ9H8Y1 702 aa7.08□□□□□ -1.28
CDR2-203ENST00000563573 SPATA31C1P0DKV0 1188 aa7.07□□□□□ -1.28
CDR2-203ENST00000563573 BAG6P46379 1132 aa7.07□□□□□ -1.28
CDR2-203ENST00000563573 PRRT3Q5FWE3 981 aa7.07□□□□□ -1.28
CDR2-203ENST00000563573 HSH2DQ96JZ2 352 aa7.07□□□□□ -1.28
CDR2-203ENST00000563573 PLVAPQ9BX97 442 aa7.07□□□□□ -1.28
CDR2-203ENST00000563573 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
CDR2-203ENST00000563573 PTPRGP23470 1445 aa7.07□□□□□ -1.28
CDR2-203ENST00000563573 C1QTNF9BB2RNN3 333 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 IGFBP4P22692 258 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 TYRO3Q06418 890 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 PTK7Q13308 1070 aa7.06□□□□□ -1.28
CDR2-203ENST00000563573 RTN1Q16799 776 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms