RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ATP6V1G1O75348 118 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 SKAP2O75563 359 aaPredicted RBP10.94□□□□□ -0.66
CDH1-205ENST00000562836 EIF4BP23588 611 aaKnown RBP10.94□□□□□ -0.66
CDH1-205ENST00000562836 NEDD9Q14511 834 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 FAAH2Q6GMR7 532 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 GOLGA5Q8TBA6 731 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 STAG1Q8WVM7 1258 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 COMMD10Q9Y6G5 202 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 CBFA2T2O43439 604 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 CRYMQ14894 314 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 HOOK3Q86VS8 718 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 SCLT1Q96NL6 688 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 WWC3Q9ULE0 1092 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 ANKRD65E5RJM6 399 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 SCNN1BP51168 640 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 PPP4CP60510 307 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
CDH1-205ENST00000562836 MTHFD1LQ6UB35 978 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 PMFBP1Q8TBY8 1022 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 RTN2O75298 545 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 CDR1P51861 262 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 GPS2Q13227 327 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 LAMB3Q13751 1172 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 ZNF397Q8NF99 534 aaPredicted RBP10.93□□□□□ -0.66
CDH1-205ENST00000562836 B4GALNT2Q8NHY0 566 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 CLIP3Q96DZ5 547 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 CDCA7Q9BWT1 371 aaPredicted RBP10.93□□□□□ -0.66
CDH1-205ENST00000562836 WDR97A6NE52 1622 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 CCDC65Q8IXS2 484 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 MYOCDQ8IZQ8 938 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
CDH1-205ENST00000562836 ENPP1P22413 925 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 RRP1P56182 461 aaKnown RBP10.92□□□□□ -0.66
CDH1-205ENST00000562836 KLHL10Q6JEL2 608 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 TMC6Q7Z403 805 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 C14orf80Q86SX3 495 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 ZSCAN16Q9H4T2 348 aaPredicted RBP10.92□□□□□ -0.66
CDH1-205ENST00000562836 TMEM63CQ9P1W3 806 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 CPP00450 1065 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 KIF4BQ2VIQ3 1234 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 WDR63Q8IWG1 891 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 SMC5Q8IY18 1101 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 HDAC6Q9UBN7 1215 aa10.92□□□□□ -0.66
CDH1-205ENST00000562836 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
CDH1-205ENST00000562836 NF2P35240 595 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 PLEKHO1Q53GL0 409 aaPredicted RBP10.91□□□□□ -0.66
CDH1-205ENST00000562836 SMUG1Q53HV7 270 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 RETREG2Q8NC44 543 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
CDH1-205ENST00000562836 HPS3Q969F9 1004 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 SPTLC3Q9NUV7 552 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 U3KPZ7 1027 aaPredicted RBP10.91□□□□□ -0.66
CDH1-205ENST00000562836 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
CDH1-205ENST00000562836 TIAM1Q13009 1591 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 ENO4A6NNW6 628 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 VDRP11473 427 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 CLCN2P51788 898 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 GUCY1B3Q02153 619 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 CC2D1AQ6P1N0 951 aaPredicted RBP10.91□□□□□ -0.66
CDH1-205ENST00000562836 NEUROD6Q96NK8 337 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 INCENPQ9NQS7 918 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 PDRG1Q9NUG6 133 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 MCM8Q9UJA3 840 aa10.91□□□□□ -0.66
CDH1-205ENST00000562836 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 RLBP1P12271 317 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 KBTBD12Q3ZCT8 623 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDH1-205ENST00000562836 OLFML1Q6UWY5 402 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 KTN1Q86UP2 1357 aaKnown RBP10.9□□□□□ -0.66
CDH1-205ENST00000562836 FRMD3A2A2Y4 597 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 RTN3O95197 1032 aaPredicted RBP10.9□□□□□ -0.66
CDH1-205ENST00000562836 HNRNPH1P31943 449 aaKnown RBP10.9□□□□□ -0.66
CDH1-205ENST00000562836 CORO7P57737 925 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 ADCY1Q08828 1119 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 PPP2R5BQ15173 497 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 ZRSR1Q15695 479 aaKnown RBP10.9□□□□□ -0.66
CDH1-205ENST00000562836 ZCCHC8Q6NZY4 707 aaKnown RBP10.9□□□□□ -0.66
CDH1-205ENST00000562836 PACS1Q6VY07 963 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 ANKRD13BQ86YJ7 626 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 FAM114A1Q8IWE2 563 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 SENP2Q9HC62 589 aa10.9□□□□□ -0.66
CDH1-205ENST00000562836 NPC1L1Q9UHC9 1359 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 USP8P40818 1118 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 NUCB2P80303 420 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 CCDC80Q76M96 950 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 WAPLQ7Z5K2 1190 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 SLC39A3Q9BRY0 314 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 CCDC194A0A1B0GVG4 234 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 SGSM2O43147 1006 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 E2F6O75461 281 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 BAG4O95429 457 aaKnown RBP10.89□□□□□ -0.67
CDH1-205ENST00000562836 DEUP1Q05D60 604 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 SCRN1Q12765 414 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 TSR1Q2NL82 804 aaKnown RBP10.89□□□□□ -0.67
CDH1-205ENST00000562836 DZIP1Q86YF9 867 aaKnown RBP10.89□□□□□ -0.67
CDH1-205ENST00000562836 NACC2Q96BF6 587 aa10.89□□□□□ -0.67
CDH1-205ENST00000562836 RMDN2Q96LZ7 410 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms