RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 KRT24Q2M2I5 525 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 E9PSI1 815 aa12.37□□□□□ -0.43
LINC00566-201ENST00000561557 PIP4K2AP48426 406 aaPredicted RBP12.37□□□□□ -0.43
LINC00566-201ENST00000561557 CCDC30Q5VVM6 783 aa12.37□□□□□ -0.43
LINC00566-201ENST00000561557 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
LINC00566-201ENST00000561557 HYPKQ9NX55 129 aa12.37□□□□□ -0.43
LINC00566-201ENST00000561557 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
LINC00566-201ENST00000561557 MYL6BP14649 208 aa12.36□□□□□ -0.43
LINC00566-201ENST00000561557 TWISTNBQ3B726 338 aaPredicted RBP12.36□□□□□ -0.43
LINC00566-201ENST00000561557 KIF6Q6ZMV9 814 aa12.36□□□□□ -0.43
LINC00566-201ENST00000561557 LRP10Q7Z4F1 713 aa12.36□□□□□ -0.43
LINC00566-201ENST00000561557 SYT17Q9BSW7 474 aa12.36□□□□□ -0.43
LINC00566-201ENST00000561557 FHDC1Q9C0D6 1143 aaPredicted RBP12.36□□□□□ -0.43
LINC00566-201ENST00000561557 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
LINC00566-201ENST00000561557 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
LINC00566-201ENST00000561557 ELL2O00472 640 aaPredicted RBP12.35□□□□□ -0.43
LINC00566-201ENST00000561557 NFIXQ14938 502 aa12.35□□□□□ -0.43
LINC00566-201ENST00000561557 TSPYL6Q8N831 410 aa12.35□□□□□ -0.43
LINC00566-201ENST00000561557 SETDB2Q96T68 719 aa12.35□□□□□ -0.43
LINC00566-201ENST00000561557 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
LINC00566-201ENST00000561557 VAMP4O75379 141 aa12.34□□□□□ -0.43
LINC00566-201ENST00000561557 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
LINC00566-201ENST00000561557 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
LINC00566-201ENST00000561557 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
LINC00566-201ENST00000561557 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
LINC00566-201ENST00000561557 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
LINC00566-201ENST00000561557 SCN7AQ01118 1682 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 SERPINB2P05120 415 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 TGFB2P61812 414 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.44
LINC00566-201ENST00000561557 DDR1Q08345 913 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 HSP90AB3PQ58FF7 597 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 TBC1D9BQ66K14 1250 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
LINC00566-201ENST00000561557 TRMT2AQ8IZ69 625 aaKnown RBP12.33□□□□□ -0.44
LINC00566-201ENST00000561557 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
LINC00566-201ENST00000561557 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
LINC00566-201ENST00000561557 ANXA1P04083 346 aa12.32□□□□□ -0.44
LINC00566-201ENST00000561557 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
LINC00566-201ENST00000561557 PLBD2Q8NHP8 589 aa12.32□□□□□ -0.44
LINC00566-201ENST00000561557 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
LINC00566-201ENST00000561557 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
LINC00566-201ENST00000561557 BCORQ6W2J9 1755 aa12.32□□□□□ -0.44
LINC00566-201ENST00000561557 CACNA1FO60840 1977 aa12.31□□□□□ -0.44
LINC00566-201ENST00000561557 DDX58O95786 925 aaKnown RBP12.31□□□□□ -0.44
LINC00566-201ENST00000561557 AIMP1Q12904 312 aaKnown RBP12.31□□□□□ -0.44
LINC00566-201ENST00000561557 HLFQ16534 295 aa12.31□□□□□ -0.44
LINC00566-201ENST00000561557 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
LINC00566-201ENST00000561557 BICDL1Q6ZP65 573 aa12.31□□□□□ -0.44
LINC00566-201ENST00000561557 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
LINC00566-201ENST00000561557 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
LINC00566-201ENST00000561557 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC00566-201ENST00000561557 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
LINC00566-201ENST00000561557 ATP10DQ9P241 1426 aa12.3□□□□□ -0.44
LINC00566-201ENST00000561557 CT47B1P0C2W7 299 aaPredicted RBP12.3□□□□□ -0.44
LINC00566-201ENST00000561557 HNRNPUQ00839 825 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC00566-201ENST00000561557 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
LINC00566-201ENST00000561557 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
LINC00566-201ENST00000561557 NYXQ9GZU5 481 aa12.3□□□□□ -0.44
LINC00566-201ENST00000561557 NUP98P52948 1817 aa12.3□□□□□ -0.44
LINC00566-201ENST00000561557 NRXN2Q9P2S2 1712 aa12.29□□□□□ -0.44
LINC00566-201ENST00000561557 PYGBP11216 843 aa12.29□□□□□ -0.44
LINC00566-201ENST00000561557 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
LINC00566-201ENST00000561557 PPP1R42Q7Z4L9 355 aa12.29□□□□□ -0.44
LINC00566-201ENST00000561557 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
LINC00566-201ENST00000561557 BRIP1Q9BX63 1249 aa12.29□□□□□ -0.44
LINC00566-201ENST00000561557 KIF13BQ9NQT8 1826 aa12.29□□□□□ -0.44
LINC00566-201ENST00000561557 NPHP1O15259 732 aa12.28□□□□□ -0.44
LINC00566-201ENST00000561557 ST5P78524 1137 aa12.28□□□□□ -0.44
LINC00566-201ENST00000561557 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
LINC00566-201ENST00000561557 PRR5LQ6MZQ0 368 aa12.28□□□□□ -0.44
LINC00566-201ENST00000561557 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
LINC00566-201ENST00000561557 CNBD1Q8NA66 436 aa12.28□□□□□ -0.44
LINC00566-201ENST00000561557 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
LINC00566-201ENST00000561557 PHAXQ9H814 394 aaKnown RBP12.28□□□□□ -0.44
LINC00566-201ENST00000561557 IBTKQ9P2D0 1353 aaPredicted RBP12.28□□□□□ -0.44
LINC00566-201ENST00000561557 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.44
LINC00566-201ENST00000561557 PDE6BP35913 854 aa12.27□□□□□ -0.45
LINC00566-201ENST00000561557 KSR2Q6VAB6 950 aa12.27□□□□□ -0.45
LINC00566-201ENST00000561557 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
LINC00566-201ENST00000561557 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.45
LINC00566-201ENST00000561557 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
LINC00566-201ENST00000561557 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
LINC00566-201ENST00000561557 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
LINC00566-201ENST00000561557 GTF2E1P29083 439 aaPredicted RBP12.26□□□□□ -0.45
LINC00566-201ENST00000561557 MKRN3Q13064 507 aaKnown RBP12.26□□□□□ -0.45
LINC00566-201ENST00000561557 ALDH1L2Q3SY69 923 aa12.26□□□□□ -0.45
LINC00566-201ENST00000561557 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
LINC00566-201ENST00000561557 H0YIN7 160 aa12.25□□□□□ -0.45
LINC00566-201ENST00000561557 GPTP24298 496 aa12.25□□□□□ -0.45
LINC00566-201ENST00000561557 FLIIQ13045 1269 aa12.25□□□□□ -0.45
LINC00566-201ENST00000561557 SUSD4Q5VX71 490 aa12.25□□□□□ -0.45
LINC00566-201ENST00000561557 METTL22Q9BUU2 404 aaPredicted RBP12.25□□□□□ -0.45
LINC00566-201ENST00000561557 UTP14AQ9BVJ6 771 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms