RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
PSME1-208ENST00000561059 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
PSME1-208ENST00000561059 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
PSME1-208ENST00000561059 GIGYF2Q6Y7W6 1299 aaKnown RBP17.6■□□□□ 0.41
PSME1-208ENST00000561059 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
PSME1-208ENST00000561059 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
PSME1-208ENST00000561059 NUP98P52948 1817 aa17.6■□□□□ 0.41
PSME1-208ENST00000561059 COL4A5P29400 1685 aa17.59■□□□□ 0.41
PSME1-208ENST00000561059 SNED1Q8TER0 1413 aa17.59■□□□□ 0.41
PSME1-208ENST00000561059 IQCA1LA6NCM1 817 aa17.59■□□□□ 0.41
PSME1-208ENST00000561059 L3MBTL3Q96JM7 780 aaPredicted RBP17.59■□□□□ 0.41
PSME1-208ENST00000561059 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
PSME1-208ENST00000561059 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
PSME1-208ENST00000561059 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
PSME1-208ENST00000561059 LDHDQ86WU2 507 aa17.58■□□□□ 0.4
PSME1-208ENST00000561059 GJA3Q9Y6H8 435 aa17.58■□□□□ 0.4
PSME1-208ENST00000561059 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
PSME1-208ENST00000561059 PPEF1O14829 653 aaPredicted RBP17.57■□□□□ 0.4
PSME1-208ENST00000561059 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
PSME1-208ENST00000561059 EPHX2P34913 555 aa17.57■□□□□ 0.4
PSME1-208ENST00000561059 COPS6Q7L5N1 327 aa17.57■□□□□ 0.4
PSME1-208ENST00000561059 XAGE3Q8WTP9 111 aa17.57■□□□□ 0.4
PSME1-208ENST00000561059 RBM17Q96I25 401 aaKnown RBP17.57■□□□□ 0.4
PSME1-208ENST00000561059 HACL1Q9UJ83 578 aa17.57■□□□□ 0.4
PSME1-208ENST00000561059 MYBBP1AQ9BQG0 1328 aaKnown RBP17.56■□□□□ 0.4
PSME1-208ENST00000561059 FZD9O00144 591 aa17.56■□□□□ 0.4
PSME1-208ENST00000561059 CAPN15O75808 1086 aa17.56■□□□□ 0.4
PSME1-208ENST00000561059 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
PSME1-208ENST00000561059 JDP2Q8WYK2 163 aa17.56■□□□□ 0.4
PSME1-208ENST00000561059 PSMD1Q99460 953 aa17.56■□□□□ 0.4
PSME1-208ENST00000561059 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
PSME1-208ENST00000561059 CREBZFQ9NS37 354 aa17.56■□□□□ 0.4
PSME1-208ENST00000561059 IBTKQ9P2D0 1353 aaPredicted RBP17.55■□□□□ 0.4
PSME1-208ENST00000561059 HCLS1P14317 486 aaPredicted RBP17.55■□□□□ 0.4
PSME1-208ENST00000561059 PARP10Q53GL7 1025 aa17.55■□□□□ 0.4
PSME1-208ENST00000561059 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
PSME1-208ENST00000561059 LARGE2Q8N3Y3 721 aa17.55■□□□□ 0.4
PSME1-208ENST00000561059 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
PSME1-208ENST00000561059 PASKQ96RG2 1323 aa17.54■□□□□ 0.4
PSME1-208ENST00000561059 LMOD3Q0VAK6 560 aa17.54■□□□□ 0.4
PSME1-208ENST00000561059 NLRP3Q96P20 1036 aa17.54■□□□□ 0.4
PSME1-208ENST00000561059 CRAMP1Q96RY5 1269 aa17.54■□□□□ 0.4
PSME1-208ENST00000561059 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
PSME1-208ENST00000561059 ITGBL1O95965 494 aaPredicted RBP17.53■□□□□ 0.4
PSME1-208ENST00000561059 EIF6P56537 245 aaKnown RBP17.53■□□□□ 0.4
PSME1-208ENST00000561059 WDR43Q15061 677 aaKnown RBP eCLIP17.53■□□□□ 0.4
PSME1-208ENST00000561059 GPC2Q8N158 579 aa17.53■□□□□ 0.4
PSME1-208ENST00000561059 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
PSME1-208ENST00000561059 ADAMTS8Q9UP79 889 aa17.53■□□□□ 0.4
PSME1-208ENST00000561059 ABCC4O15439 1325 aa17.52■□□□□ 0.4
PSME1-208ENST00000561059 AOC3Q16853 763 aa17.52■□□□□ 0.4
PSME1-208ENST00000561059 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
PSME1-208ENST00000561059 NLRP10Q86W26 655 aa17.52■□□□□ 0.4
PSME1-208ENST00000561059 TNS4Q8IZW8 715 aa17.52■□□□□ 0.4
PSME1-208ENST00000561059 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
PSME1-208ENST00000561059 CHL1O00533 1208 aa17.51■□□□□ 0.39
PSME1-208ENST00000561059 PPIP5K2O43314 1243 aa17.51■□□□□ 0.39
PSME1-208ENST00000561059 EPS15P42566 896 aa17.51■□□□□ 0.39
PSME1-208ENST00000561059 FMR1Q06787 632 aaKnown RBP eCLIP17.51■□□□□ 0.39
PSME1-208ENST00000561059 BABAM1Q9NWV8 329 aa17.51■□□□□ 0.39
PSME1-208ENST00000561059 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
PSME1-208ENST00000561059 SCN4AP35499 1836 aa17.51■□□□□ 0.39
PSME1-208ENST00000561059 SLC10A5Q5PT55 438 aa17.5■□□□□ 0.39
PSME1-208ENST00000561059 NIM1KQ8IY84 436 aa17.5■□□□□ 0.39
PSME1-208ENST00000561059 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
PSME1-208ENST00000561059 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
PSME1-208ENST00000561059 CNTNAP1P78357 1384 aa17.5■□□□□ 0.39
PSME1-208ENST00000561059 TMEM88BA6NKF7 163 aa17.49■□□□□ 0.39
PSME1-208ENST00000561059 SCNN1DP51172 638 aa17.49■□□□□ 0.39
PSME1-208ENST00000561059 TCIRG1Q13488 830 aa17.49■□□□□ 0.39
PSME1-208ENST00000561059 HDGFL1Q5TGJ6 251 aa17.49■□□□□ 0.39
PSME1-208ENST00000561059 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
PSME1-208ENST00000561059 LTBP1Q14766 1721 aa17.49■□□□□ 0.39
PSME1-208ENST00000561059 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
PSME1-208ENST00000561059 LMOD1P29536 600 aaPredicted RBP17.48■□□□□ 0.39
PSME1-208ENST00000561059 VEGFBP49765 207 aa17.48■□□□□ 0.39
PSME1-208ENST00000561059 HSP90AB3PQ58FF7 597 aa17.48■□□□□ 0.39
PSME1-208ENST00000561059 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
PSME1-208ENST00000561059 PNMA8AQ86V59 439 aaPredicted RBP17.48■□□□□ 0.39
PSME1-208ENST00000561059 TMX4Q9H1E5 349 aaPredicted RBP17.47■□□□□ 0.39
PSME1-208ENST00000561059 ADAMTSL1Q8N6G6 1762 aa17.47■□□□□ 0.39
PSME1-208ENST00000561059 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
PSME1-208ENST00000561059 FOXN1O15353 648 aa17.46■□□□□ 0.39
PSME1-208ENST00000561059 DPP8Q6V1X1 898 aaPredicted RBP17.46■□□□□ 0.39
PSME1-208ENST00000561059 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
PSME1-208ENST00000561059 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
PSME1-208ENST00000561059 TRAF5O00463 557 aa17.45■□□□□ 0.38
PSME1-208ENST00000561059 CXCL9Q07325 125 aa17.45■□□□□ 0.38
PSME1-208ENST00000561059 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
PSME1-208ENST00000561059 MPNDQ8N594 471 aa17.45■□□□□ 0.38
PSME1-208ENST00000561059 MBIPQ9NS73 344 aa17.45■□□□□ 0.38
PSME1-208ENST00000561059 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
PSME1-208ENST00000561059 ANKRD36CQ5JPF3 1778 aa17.44■□□□□ 0.38
PSME1-208ENST00000561059 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
PSME1-208ENST00000561059 BBOX1O75936 387 aa17.44■□□□□ 0.38
PSME1-208ENST00000561059 RAD17O75943 681 aa17.44■□□□□ 0.38
PSME1-208ENST00000561059 GRAPQ13588 217 aa17.44■□□□□ 0.38
PSME1-208ENST00000561059 GRIPAP1Q4V328 841 aa17.44■□□□□ 0.38
PSME1-208ENST00000561059 SP8Q8IXZ3 490 aa17.44■□□□□ 0.38
PSME1-208ENST00000561059 PLBD2Q8NHP8 589 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms