RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 FOSBP53539 338 aa10.44□□□□□ -0.74
LRRC28-219ENST00000560483 ZBED2Q9BTP6 218 aa10.44□□□□□ -0.74
LRRC28-219ENST00000560483 TEX13AQ9BXU3 409 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-219ENST00000560483 UBR3Q6ZT12 1888 aa10.44□□□□□ -0.74
LRRC28-219ENST00000560483 QSER1Q2KHR3 1735 aa10.44□□□□□ -0.74
LRRC28-219ENST00000560483 RPS6KA4O75676 772 aa10.43□□□□□ -0.74
LRRC28-219ENST00000560483 SNRPA1P09661 255 aaKnown RBP10.43□□□□□ -0.74
LRRC28-219ENST00000560483 RC3H1Q5TC82 1133 aaKnown RBP10.43□□□□□ -0.74
LRRC28-219ENST00000560483 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
LRRC28-219ENST00000560483 ARHGEF1Q92888 912 aaKnown RBP10.43□□□□□ -0.74
LRRC28-219ENST00000560483 SIPA1L3O60292 1781 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-219ENST00000560483 ADAMTS7Q9UKP4 1686 aa10.43□□□□□ -0.74
LRRC28-219ENST00000560483 COL5A3P25940 1745 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-219ENST00000560483 TJP1Q07157 1748 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 NPHP1O15259 732 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 TBC1D12O60347 775 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 DIEXFQ68CQ4 756 aaKnown RBP10.42□□□□□ -0.74
LRRC28-219ENST00000560483 AMIGO3Q86WK7 504 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 NGEFQ8N5V2 710 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 ADAM33Q9BZ11 813 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 ZBTB1Q9Y2K1 713 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 MYH14Q7Z406 1995 aaKnown RBP10.42□□□□□ -0.74
LRRC28-219ENST00000560483 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
LRRC28-219ENST00000560483 CYP19A1P11511 503 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-219ENST00000560483 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
LRRC28-219ENST00000560483 PIP4K2AP48426 406 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-219ENST00000560483 CALD1Q05682 793 aaKnown RBP10.41□□□□□ -0.74
LRRC28-219ENST00000560483 PPP1R15BQ5SWA1 713 aa10.41□□□□□ -0.74
LRRC28-219ENST00000560483 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-219ENST00000560483 UBR2Q8IWV8 1755 aa10.41□□□□□ -0.74
LRRC28-219ENST00000560483 A0A087WZG4 1122 aa10.4□□□□□ -0.74
LRRC28-219ENST00000560483 PRAMEF22A3QJZ6 481 aa10.4□□□□□ -0.74
LRRC28-219ENST00000560483 A1BGP04217 495 aa10.4□□□□□ -0.74
LRRC28-219ENST00000560483 INTS5Q6P9B9 1019 aaKnown RBP10.4□□□□□ -0.74
LRRC28-219ENST00000560483 BICDL1Q6ZP65 573 aa10.4□□□□□ -0.74
LRRC28-219ENST00000560483 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
LRRC28-219ENST00000560483 SRP68Q9UHB9 627 aaKnown RBP10.4□□□□□ -0.74
LRRC28-219ENST00000560483 PARP3Q9Y6F1 533 aa10.4□□□□□ -0.74
LRRC28-219ENST00000560483 ZNF831Q5JPB2 1677 aa10.4□□□□□ -0.74
LRRC28-219ENST00000560483 COL15A1P39059 1388 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 MMP10P09238 476 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 MYL6BP14649 208 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 USPL1Q5W0Q7 1092 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 NLGN1Q8N2Q7 840 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 SLC4A5Q9BY07 1137 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 TBC1D2BQ9UPU7 963 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
LRRC28-219ENST00000560483 SOS1Q07889 1333 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-219ENST00000560483 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
LRRC28-219ENST00000560483 WNT2BQ93097 391 aa10.38□□□□□ -0.75
LRRC28-219ENST00000560483 WWC3Q9ULE0 1092 aa10.38□□□□□ -0.75
LRRC28-219ENST00000560483 GYS1P13807 737 aa10.37□□□□□ -0.75
LRRC28-219ENST00000560483 IL6STP40189 918 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-219ENST00000560483 GNAI1P63096 354 aa10.37□□□□□ -0.75
LRRC28-219ENST00000560483 GPR162Q16538 588 aa10.37□□□□□ -0.75
LRRC28-219ENST00000560483 SYT17Q9BSW7 474 aa10.37□□□□□ -0.75
LRRC28-219ENST00000560483 KDM3BQ7LBC6 1761 aa10.37□□□□□ -0.75
LRRC28-219ENST00000560483 USP42Q9H9J4 1324 aaKnown RBP10.36□□□□□ -0.75
LRRC28-219ENST00000560483 C4AP0C0L4 1744 aa10.36□□□□□ -0.75
LRRC28-219ENST00000560483 GIGYF1O75420 1035 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-219ENST00000560483 KIF6Q6ZMV9 814 aa10.36□□□□□ -0.75
LRRC28-219ENST00000560483 DZIP3Q86Y13 1208 aaKnown RBP10.36□□□□□ -0.75
LRRC28-219ENST00000560483 BABAM1Q9NWV8 329 aa10.36□□□□□ -0.75
LRRC28-219ENST00000560483 NARFQ9UHQ1 456 aa10.36□□□□□ -0.75
LRRC28-219ENST00000560483 ELL2O00472 640 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-219ENST00000560483 PTPREP23469 700 aa10.35□□□□□ -0.75
LRRC28-219ENST00000560483 PROX2Q3B8N5 592 aa10.35□□□□□ -0.75
LRRC28-219ENST00000560483 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
LRRC28-219ENST00000560483 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
LRRC28-219ENST00000560483 MBIPQ9NS73 344 aa10.35□□□□□ -0.75
LRRC28-219ENST00000560483 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
LRRC28-219ENST00000560483 ZNF652Q9Y2D9 606 aa10.35□□□□□ -0.75
LRRC28-219ENST00000560483 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
LRRC28-219ENST00000560483 CICQ96RK0 1608 aaPredicted RBP10.34□□□□□ -0.75
LRRC28-219ENST00000560483 FAM177BA6PVY3 158 aa10.34□□□□□ -0.75
LRRC28-219ENST00000560483 CHL1O00533 1208 aa10.34□□□□□ -0.75
LRRC28-219ENST00000560483 EVI5O60447 810 aa10.34□□□□□ -0.75
LRRC28-219ENST00000560483 EIF5P55010 431 aaKnown RBP10.34□□□□□ -0.75
LRRC28-219ENST00000560483 AIMP1Q12904 312 aaKnown RBP10.34□□□□□ -0.75
LRRC28-219ENST00000560483 KRT24Q2M2I5 525 aa10.34□□□□□ -0.75
LRRC28-219ENST00000560483 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
LRRC28-219ENST00000560483 CCER2I3L3R5 266 aa10.33□□□□□ -0.76
LRRC28-219ENST00000560483 ANXA1P04083 346 aa10.33□□□□□ -0.76
LRRC28-219ENST00000560483 COL9A1P20849 921 aa10.33□□□□□ -0.76
LRRC28-219ENST00000560483 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
LRRC28-219ENST00000560483 DUSP27Q5VZP5 1158 aa10.33□□□□□ -0.76
LRRC28-219ENST00000560483 WWC1Q8IX03 1113 aa10.33□□□□□ -0.76
LRRC28-219ENST00000560483 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
LRRC28-219ENST00000560483 NLGN2Q8NFZ4 835 aa10.33□□□□□ -0.76
LRRC28-219ENST00000560483 TSR2Q969E8 191 aaKnown RBP10.33□□□□□ -0.76
LRRC28-219ENST00000560483 SETDB2Q96T68 719 aa10.33□□□□□ -0.76
LRRC28-219ENST00000560483 IRX2Q9BZI1 471 aaPredicted RBP10.33□□□□□ -0.76
LRRC28-219ENST00000560483 NFIXQ14938 502 aa10.32□□□□□ -0.76
LRRC28-219ENST00000560483 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
LRRC28-219ENST00000560483 CD2APQ9Y5K6 639 aa10.32□□□□□ -0.76
LRRC28-219ENST00000560483 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
LRRC28-219ENST00000560483 SERPINB2P05120 415 aa10.31□□□□□ -0.76
LRRC28-219ENST00000560483 ST5P78524 1137 aa10.31□□□□□ -0.76
LRRC28-219ENST00000560483 TBC1D9BQ66K14 1250 aa10.31□□□□□ -0.76
LRRC28-219ENST00000560483 NBPF10Q6P3W6 841 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms