RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 RIC1Q4ADV7 1423 aa14.04□□□□□ -0.16
CCDC33-207ENST00000559243 NTSR2O95665 410 aa14.03□□□□□ -0.16
CCDC33-207ENST00000559243 HOXA10P31260 410 aaPredicted RBP14.03□□□□□ -0.16
CCDC33-207ENST00000559243 DDX10Q13206 875 aaKnown RBP14.03□□□□□ -0.16
CCDC33-207ENST00000559243 PDIA6Q15084 440 aa14.03□□□□□ -0.16
CCDC33-207ENST00000559243 PARP10Q53GL7 1025 aa14.03□□□□□ -0.16
CCDC33-207ENST00000559243 JDP2Q8WYK2 163 aa14.03□□□□□ -0.16
CCDC33-207ENST00000559243 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
CCDC33-207ENST00000559243 PSMD1Q99460 953 aa14.03□□□□□ -0.16
CCDC33-207ENST00000559243 TAF1DQ9H5J8 278 aaPredicted RBP14.03□□□□□ -0.16
CCDC33-207ENST00000559243 MYBBP1AQ9BQG0 1328 aaKnown RBP14.02□□□□□ -0.17
CCDC33-207ENST00000559243 FZD9O00144 591 aa14.02□□□□□ -0.17
CCDC33-207ENST00000559243 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
CCDC33-207ENST00000559243 LRP10Q7Z4F1 713 aa14.02□□□□□ -0.17
CCDC33-207ENST00000559243 LDHDQ86WU2 507 aa14.02□□□□□ -0.17
CCDC33-207ENST00000559243 CRAMP1Q96RY5 1269 aa14.02□□□□□ -0.17
CCDC33-207ENST00000559243 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
CCDC33-207ENST00000559243 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
CCDC33-207ENST00000559243 ANXA1P04083 346 aa14.01□□□□□ -0.17
CCDC33-207ENST00000559243 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
CCDC33-207ENST00000559243 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
CCDC33-207ENST00000559243 PROSER3Q2NL68 480 aa14.01□□□□□ -0.17
CCDC33-207ENST00000559243 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
CCDC33-207ENST00000559243 EAPPQ56P03 285 aaPredicted RBP14.01□□□□□ -0.17
CCDC33-207ENST00000559243 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
CCDC33-207ENST00000559243 NECTIN2Q92692 538 aa14.01□□□□□ -0.17
CCDC33-207ENST00000559243 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
CCDC33-207ENST00000559243 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
CCDC33-207ENST00000559243 SNED1Q8TER0 1413 aa14□□□□□ -0.17
CCDC33-207ENST00000559243 TCERG1O14776 1098 aaKnown RBP14□□□□□ -0.17
CCDC33-207ENST00000559243 PPEF1O14829 653 aaPredicted RBP14□□□□□ -0.17
CCDC33-207ENST00000559243 EPHX2P34913 555 aa14□□□□□ -0.17
CCDC33-207ENST00000559243 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
CCDC33-207ENST00000559243 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
CCDC33-207ENST00000559243 GPC2Q8N158 579 aa14□□□□□ -0.17
CCDC33-207ENST00000559243 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
CCDC33-207ENST00000559243 RNF123Q5XPI4 1314 aa13.99□□□□□ -0.17
CCDC33-207ENST00000559243 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
CCDC33-207ENST00000559243 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC33-207ENST00000559243 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
CCDC33-207ENST00000559243 COPS6Q7L5N1 327 aa13.99□□□□□ -0.17
CCDC33-207ENST00000559243 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
CCDC33-207ENST00000559243 LARGE2Q8N3Y3 721 aa13.99□□□□□ -0.17
CCDC33-207ENST00000559243 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
CCDC33-207ENST00000559243 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
CCDC33-207ENST00000559243 MKRN1Q9UHC7 482 aaKnown RBP13.99□□□□□ -0.17
CCDC33-207ENST00000559243 LAS1LQ9Y4W2 734 aaKnown RBP13.99□□□□□ -0.17
CCDC33-207ENST00000559243 PASKQ96RG2 1323 aa13.98□□□□□ -0.17
CCDC33-207ENST00000559243 CHL1O00533 1208 aa13.98□□□□□ -0.17
CCDC33-207ENST00000559243 SLC10A5Q5PT55 438 aa13.98□□□□□ -0.17
CCDC33-207ENST00000559243 XAGE3Q8WTP9 111 aa13.98□□□□□ -0.17
CCDC33-207ENST00000559243 GJA3Q9Y6H8 435 aa13.98□□□□□ -0.17
CCDC33-207ENST00000559243 ITGBL1O95965 494 aaPredicted RBP13.97□□□□□ -0.17
CCDC33-207ENST00000559243 KRT24Q2M2I5 525 aa13.97□□□□□ -0.17
CCDC33-207ENST00000559243 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC33-207ENST00000559243 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
CCDC33-207ENST00000559243 COL4A5P29400 1685 aa13.96□□□□□ -0.17
CCDC33-207ENST00000559243 TMEM88BA6NKF7 163 aa13.96□□□□□ -0.17
CCDC33-207ENST00000559243 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.17
CCDC33-207ENST00000559243 TCIRG1Q13488 830 aa13.96□□□□□ -0.17
CCDC33-207ENST00000559243 SLC51AQ86UW1 340 aa13.96□□□□□ -0.17
CCDC33-207ENST00000559243 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
CCDC33-207ENST00000559243 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
CCDC33-207ENST00000559243 ADAMTS8Q9UP79 889 aa13.96□□□□□ -0.17
CCDC33-207ENST00000559243 ATP6V0A2Q9Y487 856 aa13.96□□□□□ -0.17
CCDC33-207ENST00000559243 ANKRD36CQ5JPF3 1778 aa13.96□□□□□ -0.18
CCDC33-207ENST00000559243 ABCC4O15439 1325 aa13.95□□□□□ -0.18
CCDC33-207ENST00000559243 PPIP5K2O43314 1243 aa13.95□□□□□ -0.18
CCDC33-207ENST00000559243 NIM1KQ8IY84 436 aa13.95□□□□□ -0.18
CCDC33-207ENST00000559243 CNTROBQ8N137 903 aa13.95□□□□□ -0.18
CCDC33-207ENST00000559243 CHPF2Q9P2E5 772 aa13.95□□□□□ -0.18
CCDC33-207ENST00000559243 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
CCDC33-207ENST00000559243 BBOX1O75936 387 aa13.94□□□□□ -0.18
CCDC33-207ENST00000559243 HCLS1P14317 486 aaPredicted RBP13.94□□□□□ -0.18
CCDC33-207ENST00000559243 AOC3Q16853 763 aa13.94□□□□□ -0.18
CCDC33-207ENST00000559243 HDGFL1Q5TGJ6 251 aa13.94□□□□□ -0.18
CCDC33-207ENST00000559243 MAP1SQ66K74 1059 aaPredicted RBP13.94□□□□□ -0.18
CCDC33-207ENST00000559243 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
CCDC33-207ENST00000559243 CNTNAP1P78357 1384 aa13.94□□□□□ -0.18
CCDC33-207ENST00000559243 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 HOXB7P09629 217 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 EPS15P42566 896 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 DDX46Q7L014 1031 aaKnown RBP13.93□□□□□ -0.18
CCDC33-207ENST00000559243 SP8Q8IXZ3 490 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 SUPT20HQ8NEM7 779 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 PLBD2Q8NHP8 589 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 LAMB2P55268 1798 aa13.93□□□□□ -0.18
CCDC33-207ENST00000559243 SCNN1DP51172 638 aa13.92□□□□□ -0.18
CCDC33-207ENST00000559243 DPP8Q6V1X1 898 aaPredicted RBP13.92□□□□□ -0.18
CCDC33-207ENST00000559243 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
CCDC33-207ENST00000559243 MPNDQ8N594 471 aa13.92□□□□□ -0.18
CCDC33-207ENST00000559243 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
CCDC33-207ENST00000559243 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
CCDC33-207ENST00000559243 DBF4Q9UBU7 674 aaPredicted RBP13.92□□□□□ -0.18
CCDC33-207ENST00000559243 LTBP1Q14766 1721 aa13.91□□□□□ -0.18
CCDC33-207ENST00000559243 VEGFBP49765 207 aa13.91□□□□□ -0.18
CCDC33-207ENST00000559243 GRAPQ13588 217 aa13.91□□□□□ -0.18
CCDC33-207ENST00000559243 USP50Q70EL3 339 aaPredicted RBP13.91□□□□□ -0.18
CCDC33-207ENST00000559243 GRAPLQ8TC17 118 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms