RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 CREBZFQ9NS37 354 aa20.04■□□□□ 0.8
IRF9-204ENST00000559229 ZNF541Q9H0D2 1346 aa20.03■□□□□ 0.8
IRF9-204ENST00000559229 RIC1Q4ADV7 1423 aa20.03■□□□□ 0.8
IRF9-204ENST00000559229 NTSR2O95665 410 aa20.03■□□□□ 0.8
IRF9-204ENST00000559229 EIF2S2P20042 333 aaKnown RBP20.03■□□□□ 0.8
IRF9-204ENST00000559229 GRIPAP1Q4V328 841 aa20.03■□□□□ 0.8
IRF9-204ENST00000559229 PARP10Q53GL7 1025 aa20.03■□□□□ 0.8
IRF9-204ENST00000559229 PPP1R42Q7Z4L9 355 aa20.03■□□□□ 0.8
IRF9-204ENST00000559229 CRAMP1Q96RY5 1269 aa20.03■□□□□ 0.8
IRF9-204ENST00000559229 SNED1Q8TER0 1413 aa20.02■□□□□ 0.8
IRF9-204ENST00000559229 RBM17Q96I25 401 aaKnown RBP20.02■□□□□ 0.8
IRF9-204ENST00000559229 HACL1Q9UJ83 578 aa20.02■□□□□ 0.8
IRF9-204ENST00000559229 JDP2Q8WYK2 163 aa20.01■□□□□ 0.79
IRF9-204ENST00000559229 NUP98P52948 1817 aa20.01■□□□□ 0.79
IRF9-204ENST00000559229 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
IRF9-204ENST00000559229 GPC2Q8N158 579 aa20■□□□□ 0.79
IRF9-204ENST00000559229 NLRP3Q96P20 1036 aa20■□□□□ 0.79
IRF9-204ENST00000559229 PASKQ96RG2 1323 aa20■□□□□ 0.79
IRF9-204ENST00000559229 EPHX2P34913 555 aa19.99■□□□□ 0.79
IRF9-204ENST00000559229 PROSER3Q2NL68 480 aa19.99■□□□□ 0.79
IRF9-204ENST00000559229 UTP14AQ9BVJ6 771 aaKnown RBP19.99■□□□□ 0.79
IRF9-204ENST00000559229 SCN4AP35499 1836 aa19.98■□□□□ 0.79
IRF9-204ENST00000559229 ITGBL1O95965 494 aaPredicted RBP19.98■□□□□ 0.79
IRF9-204ENST00000559229 HSPA1AP0DMV8 641 aaKnown RBP19.98■□□□□ 0.79
IRF9-204ENST00000559229 HSPA1BP0DMV9 641 aaKnown RBP19.98■□□□□ 0.79
IRF9-204ENST00000559229 DDX10Q13206 875 aaKnown RBP19.98■□□□□ 0.79
IRF9-204ENST00000559229 EAPPQ56P03 285 aaPredicted RBP19.98■□□□□ 0.79
IRF9-204ENST00000559229 PNMA8AQ86V59 439 aaPredicted RBP19.98■□□□□ 0.79
IRF9-204ENST00000559229 MYBBP1AQ9BQG0 1328 aaKnown RBP19.98■□□□□ 0.79
IRF9-204ENST00000559229 CHL1O00533 1208 aa19.97■□□□□ 0.79
IRF9-204ENST00000559229 PPEF1O14829 653 aaPredicted RBP19.97■□□□□ 0.79
IRF9-204ENST00000559229 ANXA1P04083 346 aa19.97■□□□□ 0.79
IRF9-204ENST00000559229 EIF6P56537 245 aaKnown RBP19.97■□□□□ 0.79
IRF9-204ENST00000559229 HSP90AB3PQ58FF7 597 aa19.97■□□□□ 0.79
IRF9-204ENST00000559229 C3orf67Q6ZVT6 689 aa19.97■□□□□ 0.79
IRF9-204ENST00000559229 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
IRF9-204ENST00000559229 CLEC11AQ9Y240 323 aa19.97■□□□□ 0.79
IRF9-204ENST00000559229 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
IRF9-204ENST00000559229 NEUROD2Q15784 382 aa19.96■□□□□ 0.79
IRF9-204ENST00000559229 MKRN1Q9UHC7 482 aaKnown RBP19.96■□□□□ 0.79
IRF9-204ENST00000559229 CCDC146Q8IYE0 955 aa19.95■□□□□ 0.78
IRF9-204ENST00000559229 LARGE2Q8N3Y3 721 aa19.95■□□□□ 0.78
IRF9-204ENST00000559229 XAGE3Q8WTP9 111 aa19.95■□□□□ 0.78
IRF9-204ENST00000559229 NECTIN2Q92692 538 aa19.95■□□□□ 0.78
IRF9-204ENST00000559229 RUNDC1Q96C34 613 aa19.95■□□□□ 0.78
IRF9-204ENST00000559229 TMX4Q9H1E5 349 aaPredicted RBP19.95■□□□□ 0.78
IRF9-204ENST00000559229 TCERG1O14776 1098 aaKnown RBP19.94■□□□□ 0.78
IRF9-204ENST00000559229 AIMP1Q12904 312 aaKnown RBP19.94■□□□□ 0.78
IRF9-204ENST00000559229 VPS33BQ9H267 617 aa19.94■□□□□ 0.78
IRF9-204ENST00000559229 DDX21Q9NR30 783 aaKnown RBP eCLIP19.94■□□□□ 0.78
IRF9-204ENST00000559229 TRIM35Q9UPQ4 493 aa19.94■□□□□ 0.78
IRF9-204ENST00000559229 ATP6V0A2Q9Y487 856 aa19.94■□□□□ 0.78
IRF9-204ENST00000559229 TMEM88BA6NKF7 163 aa19.93■□□□□ 0.78
IRF9-204ENST00000559229 TCIRG1Q13488 830 aa19.93■□□□□ 0.78
IRF9-204ENST00000559229 WDR43Q15061 677 aaKnown RBP eCLIP19.93■□□□□ 0.78
IRF9-204ENST00000559229 NLRP10Q86W26 655 aa19.93■□□□□ 0.78
IRF9-204ENST00000559229 CNTROBQ8N137 903 aa19.93■□□□□ 0.78
IRF9-204ENST00000559229 GJA3Q9Y6H8 435 aa19.93■□□□□ 0.78
IRF9-204ENST00000559229 CNTNAP1P78357 1384 aa19.93■□□□□ 0.78
IRF9-204ENST00000559229 BBOX1O75936 387 aa19.92■□□□□ 0.78
IRF9-204ENST00000559229 SLC51AQ86UW1 340 aa19.92■□□□□ 0.78
IRF9-204ENST00000559229 ADAMTS8Q9UP79 889 aa19.92■□□□□ 0.78
IRF9-204ENST00000559229 COL4A5P29400 1685 aa19.91■□□□□ 0.78
IRF9-204ENST00000559229 LMOD1P29536 600 aaPredicted RBP19.91■□□□□ 0.78
IRF9-204ENST00000559229 KRT24Q2M2I5 525 aa19.91■□□□□ 0.78
IRF9-204ENST00000559229 TRMT112Q9UI30 125 aaKnown RBP19.91■□□□□ 0.78
IRF9-204ENST00000559229 LAS1LQ9Y4W2 734 aaKnown RBP19.91■□□□□ 0.78
IRF9-204ENST00000559229 ABCC4O15439 1325 aa19.91■□□□□ 0.78
IRF9-204ENST00000559229 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
IRF9-204ENST00000559229 HOXB7P09629 217 aa19.9■□□□□ 0.78
IRF9-204ENST00000559229 HCLS1P14317 486 aaPredicted RBP19.9■□□□□ 0.78
IRF9-204ENST00000559229 SCNN1DP51172 638 aa19.9■□□□□ 0.78
IRF9-204ENST00000559229 MAP1SQ66K74 1059 aaPredicted RBP19.9■□□□□ 0.78
IRF9-204ENST00000559229 SP8Q8IXZ3 490 aa19.9■□□□□ 0.78
IRF9-204ENST00000559229 NIM1KQ8IY84 436 aa19.9■□□□□ 0.78
IRF9-204ENST00000559229 RTFDC1Q9BY42 306 aaPredicted RBP19.9■□□□□ 0.78
IRF9-204ENST00000559229 SLC34A2O95436 690 aa19.89■□□□□ 0.77
IRF9-204ENST00000559229 SUPT20HQ8NEM7 779 aa19.89■□□□□ 0.77
IRF9-204ENST00000559229 CHPF2Q9P2E5 772 aa19.89■□□□□ 0.77
IRF9-204ENST00000559229 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
IRF9-204ENST00000559229 SH3TC1Q8TE82 1336 aa19.88■□□□□ 0.77
IRF9-204ENST00000559229 EPS15P42566 896 aa19.88■□□□□ 0.77
IRF9-204ENST00000559229 AOC3Q16853 763 aa19.88■□□□□ 0.77
IRF9-204ENST00000559229 HDGFL1Q5TGJ6 251 aa19.88■□□□□ 0.77
IRF9-204ENST00000559229 DDX46Q7L014 1031 aaKnown RBP19.88■□□□□ 0.77
IRF9-204ENST00000559229 PLBD2Q8NHP8 589 aa19.88■□□□□ 0.77
IRF9-204ENST00000559229 CFAP44Q96MT7 982 aa19.88■□□□□ 0.77
IRF9-204ENST00000559229 VEGFBP49765 207 aa19.87■□□□□ 0.77
IRF9-204ENST00000559229 ANKRD13DQ6ZTN6 518 aa19.87■□□□□ 0.77
IRF9-204ENST00000559229 USP50Q70EL3 339 aaPredicted RBP19.87■□□□□ 0.77
IRF9-204ENST00000559229 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
IRF9-204ENST00000559229 GRAPQ13588 217 aa19.86■□□□□ 0.77
IRF9-204ENST00000559229 DPP8Q6V1X1 898 aaPredicted RBP19.86■□□□□ 0.77
IRF9-204ENST00000559229 MPNDQ8N594 471 aa19.86■□□□□ 0.77
IRF9-204ENST00000559229 GRAPLQ8TC17 118 aaPredicted RBP19.86■□□□□ 0.77
IRF9-204ENST00000559229 ZNRF3Q9ULT6 936 aa19.86■□□□□ 0.77
IRF9-204ENST00000559229 RASSF10A6NK89 507 aa19.85■□□□□ 0.77
IRF9-204ENST00000559229 CXCL9Q07325 125 aa19.85■□□□□ 0.77
IRF9-204ENST00000559229 DEFB115Q30KQ5 88 aa19.85■□□□□ 0.77
IRF9-204ENST00000559229 KIAA2012Q0VF49 1180 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms