RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 MMP10P09238 476 aa7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 HOXB7P09629 217 aa7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 ATN1P54259 1190 aaPredicted RBP7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 DUSP27Q5VZP5 1158 aa7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 DDX27Q96GQ7 796 aaKnown RBP7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 LARP6Q9BRS8 491 aaKnown RBP7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 NRXN2Q9P2S2 1712 aa7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 LAMB2P55268 1798 aa7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 FANCIQ9NVI1 1328 aa7.51□□□□□ -1.21
CHRNA3-203ENST00000558903 CARMIL3Q8ND23 1372 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 ANKRD31Q8N7Z5 1873 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 GYS1P13807 737 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 EIF5P55010 431 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 AIMP1Q12904 312 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 KRT24Q2M2I5 525 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 TWISTNBQ3B726 338 aaPredicted RBP7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 CCDC30Q5VVM6 783 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 POTEHQ6S545 545 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 AMIGO3Q86WK7 504 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 ZBTB3Q9H5J0 574 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 CHPF2Q9P2E5 772 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 DBF4Q9UBU7 674 aaPredicted RBP7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 ARIH1Q9Y4X5 557 aaPredicted RBP7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 MYH3P11055 1940 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 CHD4Q14839 1912 aa7.5□□□□□ -1.21
CHRNA3-203ENST00000558903 COL11A2P13942 1736 aaPredicted RBP7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 BRCA1P38398 1863 aaKnown RBP7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 E9PSI1 815 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 GABBR2O75899 941 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 DDX58O95786 925 aaKnown RBP7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 PLCG2P16885 1265 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 PTGER2P43116 358 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 IRX5P78411 483 aaPredicted RBP7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 ST5P78524 1137 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 TPRNQ4KMQ1 711 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 DCBLD2Q96PD2 775 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 FHDC1Q9C0D6 1143 aaPredicted RBP7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 DDX21Q9NR30 783 aaKnown RBP eCLIP7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 HYPKQ9NX55 129 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 ARFGEF1Q9Y6D6 1849 aa7.49□□□□□ -1.21
CHRNA3-203ENST00000558903 SPEF2Q9C093 1822 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 FAM177BA6PVY3 158 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 NBPF26B4DH59 902 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 ANXA1P04083 346 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 HSP90AB3PQ58FF7 597 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 NBPF10Q6P3W6 841 aaKnown RBP7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 NBPF5PQ86XG9 351 aaPredicted RBP7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 NBPF15Q8N660 670 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 PDCD7Q8N8D1 485 aaKnown RBP7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 CNBD1Q8NA66 436 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 L3MBTL3Q96JM7 780 aaPredicted RBP7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 KIAA1551Q9HCM1 1747 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 NIP7Q9Y221 180 aaKnown RBP eCLIP7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 MAP3K15Q6ZN16 1313 aa7.48□□□□□ -1.21
CHRNA3-203ENST00000558903 C10orf71Q711Q0 1435 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 SERPINB2P05120 415 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 EXOSC9Q06265 439 aaKnown RBP7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 GPR162Q16538 588 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 TBC1D9BQ66K14 1250 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 MICALL2Q8IY33 904 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 C8orf58Q8NAV2 365 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 XAGE3Q8WTP9 111 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 NYXQ9GZU5 481 aa7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 GPHNQ9NQX3 736 aaPredicted RBP7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 DDX60Q8IY21 1712 aaKnown RBP7.47□□□□□ -1.21
CHRNA3-203ENST00000558903 ATP10DQ9P241 1426 aa7.46□□□□□ -1.21
CHRNA3-203ENST00000558903 ERVV-1B6SEH8 477 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 TCERG1O14776 1098 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 CAMTA2O94983 1202 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 GPTP24298 496 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 NEXNQ0ZGT2 675 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 CAMK2BQ13554 666 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 NFIXQ14938 502 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 CLEC4GQ6UXB4 293 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 TTLL7Q6ZT98 887 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 COPS6Q7L5N1 327 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 PPP1R42Q7Z4L9 355 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 SLC39A7Q92504 469 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 SYT17Q9BSW7 474 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 BOLA1Q9Y3E2 137 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 CD2APQ9Y5K6 639 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 TNRC6CQ9HCJ0 1690 aaKnown RBP7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 CCDC88AQ3V6T2 1871 aa7.46□□□□□ -1.22
CHRNA3-203ENST00000558903 POLRMTO00411 1230 aaKnown RBP7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 DDR1Q08345 913 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 FKBP5Q13451 457 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 PROSER3Q2NL68 480 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 PARP10Q53GL7 1025 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 TPTE2Q6XPS3 522 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 TSPYL6Q8N831 410 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 PLBD2Q8NHP8 589 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 TMC2Q8TDI7 906 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 TMEM121BQ9BXQ6 578 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 WWC3Q9ULE0 1092 aa7.45□□□□□ -1.22
CHRNA3-203ENST00000558903 PXDNLA1KZ92 1463 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms