RNA–Protein interactions for RNA: ENST00000558705.1

PKNOX2-209, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-209ENST00000558705 RTKN2Q8IZC4 609 aa18.07■□□□□ 0.48
PKNOX2-209ENST00000558705 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
PKNOX2-209ENST00000558705 BABAM1Q9NWV8 329 aa18.07■□□□□ 0.48
PKNOX2-209ENST00000558705 ADAMTS8Q9UP79 889 aa18.07■□□□□ 0.48
PKNOX2-209ENST00000558705 LAMB2P55268 1798 aa18.07■□□□□ 0.48
PKNOX2-209ENST00000558705 CHL1O00533 1208 aa18.06■□□□□ 0.48
PKNOX2-209ENST00000558705 HOXA10P31260 410 aaPredicted RBP18.06■□□□□ 0.48
PKNOX2-209ENST00000558705 IARSP41252 1262 aaKnown RBP18.06■□□□□ 0.48
PKNOX2-209ENST00000558705 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
PKNOX2-209ENST00000558705 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
PKNOX2-209ENST00000558705 L3MBTL3Q96JM7 780 aaPredicted RBP18.06■□□□□ 0.48
PKNOX2-209ENST00000558705 SCN4AP35499 1836 aa18.06■□□□□ 0.48
PKNOX2-209ENST00000558705 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
PKNOX2-209ENST00000558705 COPS6Q7L5N1 327 aa18.05■□□□□ 0.48
PKNOX2-209ENST00000558705 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
PKNOX2-209ENST00000558705 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
PKNOX2-209ENST00000558705 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
PKNOX2-209ENST00000558705 AIMP1Q12904 312 aaKnown RBP18.04■□□□□ 0.48
PKNOX2-209ENST00000558705 CHADLQ6NUI6 762 aa18.04■□□□□ 0.48
PKNOX2-209ENST00000558705 ZNF428Q96B54 188 aa18.04■□□□□ 0.48
PKNOX2-209ENST00000558705 TAF1DQ9H5J8 278 aaPredicted RBP18.04■□□□□ 0.48
PKNOX2-209ENST00000558705 FZD9O00144 591 aa18.03■□□□□ 0.48
PKNOX2-209ENST00000558705 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
PKNOX2-209ENST00000558705 PSMD1Q99460 953 aa18.03■□□□□ 0.48
PKNOX2-209ENST00000558705 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
PKNOX2-209ENST00000558705 ADAMTSL1Q8N6G6 1762 aa18.03■□□□□ 0.48
PKNOX2-209ENST00000558705 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 TAF1P21675 1872 aa18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 LTBP1Q14766 1721 aa18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 PARP10Q53GL7 1025 aa18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 PPP1R42Q7Z4L9 355 aa18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 CRAMP1Q96RY5 1269 aa18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 CHPF2Q9P2E5 772 aa18.02■□□□□ 0.48
PKNOX2-209ENST00000558705 RNF123Q5XPI4 1314 aa18.01■□□□□ 0.47
PKNOX2-209ENST00000558705 SLC10A5Q5PT55 438 aa18.01■□□□□ 0.47
PKNOX2-209ENST00000558705 NLRP10Q86W26 655 aa18.01■□□□□ 0.47
PKNOX2-209ENST00000558705 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
PKNOX2-209ENST00000558705 IQCA1LA6NCM1 817 aa18■□□□□ 0.47
PKNOX2-209ENST00000558705 HCLS1P14317 486 aaPredicted RBP18■□□□□ 0.47
PKNOX2-209ENST00000558705 ABCC4O15439 1325 aa17.99■□□□□ 0.47
PKNOX2-209ENST00000558705 DDX60Q8IY21 1712 aaKnown RBP17.99■□□□□ 0.47
PKNOX2-209ENST00000558705 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
PKNOX2-209ENST00000558705 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
PKNOX2-209ENST00000558705 LDHDQ86WU2 507 aa17.99■□□□□ 0.47
PKNOX2-209ENST00000558705 NLRP3Q96P20 1036 aa17.99■□□□□ 0.47
PKNOX2-209ENST00000558705 HACL1Q9UJ83 578 aa17.99■□□□□ 0.47
PKNOX2-209ENST00000558705 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
PKNOX2-209ENST00000558705 EPHX2P34913 555 aa17.98■□□□□ 0.47
PKNOX2-209ENST00000558705 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
PKNOX2-209ENST00000558705 MBIPQ9NS73 344 aa17.98■□□□□ 0.47
PKNOX2-209ENST00000558705 COL4A1P02462 1669 aa17.98■□□□□ 0.47
PKNOX2-209ENST00000558705 ITGBL1O95965 494 aaPredicted RBP17.97■□□□□ 0.47
PKNOX2-209ENST00000558705 COL13A1Q5TAT6 717 aaPredicted RBP17.97■□□□□ 0.47
PKNOX2-209ENST00000558705 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
PKNOX2-209ENST00000558705 GPC2Q8N158 579 aa17.97■□□□□ 0.47
PKNOX2-209ENST00000558705 APAF1O14727 1248 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 JDP2Q8WYK2 163 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 ATP6V0A2Q9Y487 856 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 GJA3Q9Y6H8 435 aa17.96■□□□□ 0.47
PKNOX2-209ENST00000558705 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
PKNOX2-209ENST00000558705 AOC3Q16853 763 aa17.95■□□□□ 0.46
PKNOX2-209ENST00000558705 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
PKNOX2-209ENST00000558705 PCNTO95613 3336 aa17.95■□□□□ 0.46
PKNOX2-209ENST00000558705 ATP5J2-PTCD1G3V325 749 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 HOXB7P09629 217 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 HSPA1AP0DMV8 641 aaKnown RBP17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 HSPA1BP0DMV9 641 aaKnown RBP17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 SCNN1DP51172 638 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 EIF6P56537 245 aaKnown RBP17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 MAP1SQ66K74 1059 aaPredicted RBP17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 CLEC11AQ9Y240 323 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 DUOX1Q9NRD9 1551 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 SH3TC1Q8TE82 1336 aa17.94■□□□□ 0.46
PKNOX2-209ENST00000558705 PPIP5K2O43314 1243 aa17.93■□□□□ 0.46
PKNOX2-209ENST00000558705 EPS15P42566 896 aa17.93■□□□□ 0.46
PKNOX2-209ENST00000558705 ISCA1Q9BUE6 129 aa17.93■□□□□ 0.46
PKNOX2-209ENST00000558705 DBF4Q9UBU7 674 aaPredicted RBP17.93■□□□□ 0.46
PKNOX2-209ENST00000558705 LRRC37AA6NMS7 1700 aa17.92■□□□□ 0.46
PKNOX2-209ENST00000558705 GRIPAP1Q4V328 841 aa17.92■□□□□ 0.46
PKNOX2-209ENST00000558705 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
PKNOX2-209ENST00000558705 NIM1KQ8IY84 436 aa17.92■□□□□ 0.46
PKNOX2-209ENST00000558705 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
PKNOX2-209ENST00000558705 RTFDC1Q9BY42 306 aaPredicted RBP17.92■□□□□ 0.46
PKNOX2-209ENST00000558705 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
PKNOX2-209ENST00000558705 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
PKNOX2-209ENST00000558705 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
PKNOX2-209ENST00000558705 PHAXQ9H814 394 aaKnown RBP17.91■□□□□ 0.46
PKNOX2-209ENST00000558705 CNTNAP1P78357 1384 aa17.91■□□□□ 0.46
PKNOX2-209ENST00000558705 BBOX1O75936 387 aa17.9■□□□□ 0.46
PKNOX2-209ENST00000558705 GRAPQ13588 217 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms