RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 ERBB4Q15303 1308 aa22.57■■□□□ 1.2
NEDD1-210ENST00000557400 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
NEDD1-210ENST00000557400 KDM3BQ7LBC6 1761 aa22.56■■□□□ 1.2
NEDD1-210ENST00000557400 PNMA8AQ86V59 439 aaPredicted RBP22.56■■□□□ 1.2
NEDD1-210ENST00000557400 GPC2Q8N158 579 aa22.56■■□□□ 1.2
NEDD1-210ENST00000557400 SCN4AP35499 1836 aa22.55■■□□□ 1.2
NEDD1-210ENST00000557400 TMEM88BA6NKF7 163 aa22.55■■□□□ 1.2
NEDD1-210ENST00000557400 SUSD4Q5VX71 490 aa22.55■■□□□ 1.2
NEDD1-210ENST00000557400 ZNF34Q8IZ26 560 aa22.55■■□□□ 1.2
NEDD1-210ENST00000557400 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
NEDD1-210ENST00000557400 GRIPAP1Q4V328 841 aa22.54■■□□□ 1.2
NEDD1-210ENST00000557400 GIGYF2Q6Y7W6 1299 aaKnown RBP22.54■■□□□ 1.2
NEDD1-210ENST00000557400 NTSR2O95665 410 aa22.53■■□□□ 1.2
NEDD1-210ENST00000557400 CRAMP1Q96RY5 1269 aa22.53■■□□□ 1.2
NEDD1-210ENST00000557400 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
NEDD1-210ENST00000557400 EIF6P56537 245 aaKnown RBP22.52■■□□□ 1.2
NEDD1-210ENST00000557400 PARP10Q53GL7 1025 aa22.52■■□□□ 1.2
NEDD1-210ENST00000557400 PPP1R42Q7Z4L9 355 aa22.52■■□□□ 1.2
NEDD1-210ENST00000557400 RBM17Q96I25 401 aaKnown RBP22.52■■□□□ 1.2
NEDD1-210ENST00000557400 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
NEDD1-210ENST00000557400 CNTROBQ8N137 903 aa22.51■■□□□ 1.19
NEDD1-210ENST00000557400 VEGFBP49765 207 aa22.5■■□□□ 1.19
NEDD1-210ENST00000557400 MAP1SQ66K74 1059 aaPredicted RBP22.5■■□□□ 1.19
NEDD1-210ENST00000557400 LRP10Q7Z4F1 713 aa22.5■■□□□ 1.19
NEDD1-210ENST00000557400 LARGE2Q8N3Y3 721 aa22.5■■□□□ 1.19
NEDD1-210ENST00000557400 GJA3Q9Y6H8 435 aa22.5■■□□□ 1.19
NEDD1-210ENST00000557400 ADAMTSL1Q8N6G6 1762 aa22.49■■□□□ 1.19
NEDD1-210ENST00000557400 FOXN1O15353 648 aa22.49■■□□□ 1.19
NEDD1-210ENST00000557400 PDIA6Q15084 440 aa22.49■■□□□ 1.19
NEDD1-210ENST00000557400 C3orf67Q6ZVT6 689 aa22.49■■□□□ 1.19
NEDD1-210ENST00000557400 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
NEDD1-210ENST00000557400 COL4A5P29400 1685 aa22.49■■□□□ 1.19
NEDD1-210ENST00000557400 LMOD1P29536 600 aaPredicted RBP22.48■■□□□ 1.19
NEDD1-210ENST00000557400 SLC51AQ86UW1 340 aa22.48■■□□□ 1.19
NEDD1-210ENST00000557400 NLRP3Q96P20 1036 aa22.48■■□□□ 1.19
NEDD1-210ENST00000557400 BABAM1Q9NWV8 329 aa22.48■■□□□ 1.19
NEDD1-210ENST00000557400 TCERG1O14776 1098 aaKnown RBP22.47■■□□□ 1.19
NEDD1-210ENST00000557400 EIF2S2P20042 333 aaKnown RBP22.47■■□□□ 1.19
NEDD1-210ENST00000557400 RIPK4P57078 832 aa22.47■■□□□ 1.19
NEDD1-210ENST00000557400 UTP14AQ9BVJ6 771 aaKnown RBP22.47■■□□□ 1.19
NEDD1-210ENST00000557400 NUP98P52948 1817 aa22.46■■□□□ 1.19
NEDD1-210ENST00000557400 RASSF10A6NK89 507 aa22.46■■□□□ 1.19
NEDD1-210ENST00000557400 SCNN1DP51172 638 aa22.46■■□□□ 1.19
NEDD1-210ENST00000557400 SLC10A5Q5PT55 438 aa22.46■■□□□ 1.19
NEDD1-210ENST00000557400 NIM1KQ8IY84 436 aa22.46■■□□□ 1.19
NEDD1-210ENST00000557400 AIDAQ96BJ3 306 aa22.46■■□□□ 1.19
NEDD1-210ENST00000557400 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
NEDD1-210ENST00000557400 LMOD3Q0VAK6 560 aa22.45■■□□□ 1.18
NEDD1-210ENST00000557400 PROSER3Q2NL68 480 aa22.45■■□□□ 1.18
NEDD1-210ENST00000557400 PRDM10Q9NQV6 1147 aa22.45■■□□□ 1.18
NEDD1-210ENST00000557400 ATP6V0A2Q9Y487 856 aa22.45■■□□□ 1.18
NEDD1-210ENST00000557400 PPIP5K2O43314 1243 aa22.44■■□□□ 1.18
NEDD1-210ENST00000557400 ANXA1P04083 346 aa22.44■■□□□ 1.18
NEDD1-210ENST00000557400 EPS15P42566 896 aa22.44■■□□□ 1.18
NEDD1-210ENST00000557400 CTCFP49711 727 aaPredicted RBP22.44■■□□□ 1.18
NEDD1-210ENST00000557400 DEFB115Q30KQ5 88 aa22.44■■□□□ 1.18
NEDD1-210ENST00000557400 TMPOP42166 694 aaKnown RBP22.43■■□□□ 1.18
NEDD1-210ENST00000557400 RALBP1Q15311 655 aa22.43■■□□□ 1.18
NEDD1-210ENST00000557400 VPS33BQ9H267 617 aa22.43■■□□□ 1.18
NEDD1-210ENST00000557400 DDX21Q9NR30 783 aaKnown RBP eCLIP22.43■■□□□ 1.18
NEDD1-210ENST00000557400 WBP1LQ9NX94 342 aa22.43■■□□□ 1.18
NEDD1-210ENST00000557400 ABCC4O15439 1325 aa22.42■■□□□ 1.18
NEDD1-210ENST00000557400 AOC3Q16853 763 aa22.42■■□□□ 1.18
NEDD1-210ENST00000557400 HSP90AB3PQ58FF7 597 aa22.42■■□□□ 1.18
NEDD1-210ENST00000557400 USP50Q70EL3 339 aaPredicted RBP22.42■■□□□ 1.18
NEDD1-210ENST00000557400 ABT1Q9ULW3 272 aaKnown RBP22.42■■□□□ 1.18
NEDD1-210ENST00000557400 COPS6Q7L5N1 327 aa22.41■■□□□ 1.18
NEDD1-210ENST00000557400 SUPT20HQ8NEM7 779 aa22.41■■□□□ 1.18
NEDD1-210ENST00000557400 LTBP1Q14766 1721 aa22.4■■□□□ 1.18
NEDD1-210ENST00000557400 NLRP10Q86W26 655 aa22.4■■□□□ 1.18
NEDD1-210ENST00000557400 XAGE3Q8WTP9 111 aa22.4■■□□□ 1.18
NEDD1-210ENST00000557400 NECTIN2Q92692 538 aa22.4■■□□□ 1.18
NEDD1-210ENST00000557400 RTFDC1Q9BY42 306 aaPredicted RBP22.4■■□□□ 1.18
NEDD1-210ENST00000557400 WDR33Q9C0J8 1336 aaKnown RBP22.39■■□□□ 1.18
NEDD1-210ENST00000557400 BBOX1O75936 387 aa22.39■■□□□ 1.17
NEDD1-210ENST00000557400 AIMP1Q12904 312 aaKnown RBP22.39■■□□□ 1.17
NEDD1-210ENST00000557400 ZNRF3Q9ULT6 936 aa22.39■■□□□ 1.17
NEDD1-210ENST00000557400 HCLS1P14317 486 aaPredicted RBP22.38■■□□□ 1.17
NEDD1-210ENST00000557400 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
NEDD1-210ENST00000557400 SP8Q8IXZ3 490 aa22.38■■□□□ 1.17
NEDD1-210ENST00000557400 GPRC5DQ9NZD1 345 aa22.38■■□□□ 1.17
NEDD1-210ENST00000557400 MAP2K1Q02750 393 aaPredicted RBP22.37■■□□□ 1.17
NEDD1-210ENST00000557400 CXCL9Q07325 125 aa22.37■■□□□ 1.17
NEDD1-210ENST00000557400 TCIRG1Q13488 830 aa22.37■■□□□ 1.17
NEDD1-210ENST00000557400 ADARB2Q9NS39 739 aaKnown RBP22.37■■□□□ 1.17
NEDD1-210ENST00000557400 TRMT112Q9UI30 125 aaKnown RBP22.37■■□□□ 1.17
NEDD1-210ENST00000557400 SH3TC1Q8TE82 1336 aa22.36■■□□□ 1.17
NEDD1-210ENST00000557400 CHL1O00533 1208 aa22.36■■□□□ 1.17
NEDD1-210ENST00000557400 LBX1P52954 281 aa22.36■■□□□ 1.17
NEDD1-210ENST00000557400 FMR1Q06787 632 aaKnown RBP eCLIP22.36■■□□□ 1.17
NEDD1-210ENST00000557400 DDX46Q7L014 1031 aaKnown RBP22.36■■□□□ 1.17
NEDD1-210ENST00000557400 MPNDQ8N594 471 aa22.36■■□□□ 1.17
NEDD1-210ENST00000557400 KIAA2012Q0VF49 1180 aa22.35■■□□□ 1.17
NEDD1-210ENST00000557400 GRAPQ13588 217 aa22.35■■□□□ 1.17
NEDD1-210ENST00000557400 NEUROD2Q15784 382 aa22.35■■□□□ 1.17
NEDD1-210ENST00000557400 KRT24Q2M2I5 525 aa22.35■■□□□ 1.17
NEDD1-210ENST00000557400 GRAPLQ8TC17 118 aaPredicted RBP22.35■■□□□ 1.17
NEDD1-210ENST00000557400 TRAF5O00463 557 aa22.34■■□□□ 1.17
NEDD1-210ENST00000557400 CCDC146Q8IYE0 955 aa22.34■■□□□ 1.17
NEDD1-210ENST00000557400 MYBBP1AQ9BQG0 1328 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms