RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 KCNH4Q9UQ05 1017 aa9.76□□□□□ -0.85
HIF1A-209ENST00000556827 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
HIF1A-209ENST00000556827 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-209ENST00000556827 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-209ENST00000556827 SIN3BO75182 1162 aa9.75□□□□□ -0.85
HIF1A-209ENST00000556827 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
HIF1A-209ENST00000556827 BTLAQ7Z6A9 289 aa9.75□□□□□ -0.85
HIF1A-209ENST00000556827 ALYREFQ86V81 257 aaKnown RBP9.75□□□□□ -0.85
HIF1A-209ENST00000556827 ELOA3Q8NG57 546 aa9.75□□□□□ -0.85
HIF1A-209ENST00000556827 VTI1AQ96AJ9 217 aa9.75□□□□□ -0.85
HIF1A-209ENST00000556827 COL8A1P27658 744 aa9.74□□□□□ -0.85
HIF1A-209ENST00000556827 SUV39H2Q9H5I1 410 aa9.74□□□□□ -0.85
HIF1A-209ENST00000556827 NOP53Q9NZM5 478 aaKnown RBP9.74□□□□□ -0.85
HIF1A-209ENST00000556827 MSTNO14793 375 aa9.73□□□□□ -0.85
HIF1A-209ENST00000556827 KCNQ4P56696 695 aa9.73□□□□□ -0.85
HIF1A-209ENST00000556827 NOVA2Q9UNW9 492 aaKnown RBP9.73□□□□□ -0.85
HIF1A-209ENST00000556827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.72□□□□□ -0.85
HIF1A-209ENST00000556827 KRBA1A5PL33 1030 aa9.71□□□□□ -0.86
HIF1A-209ENST00000556827 TGFBR3LH3BV60 316 aa9.71□□□□□ -0.86
HIF1A-209ENST00000556827 FOXO3O43524 673 aa9.71□□□□□ -0.86
HIF1A-209ENST00000556827 WEE1P30291 646 aa9.71□□□□□ -0.86
HIF1A-209ENST00000556827 IER5Q5VY09 327 aa9.71□□□□□ -0.86
HIF1A-209ENST00000556827 BHMTQ93088 406 aa9.71□□□□□ -0.86
HIF1A-209ENST00000556827 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
HIF1A-209ENST00000556827 ADH7P40394 386 aa9.7□□□□□ -0.86
HIF1A-209ENST00000556827 TBC1D8BQ0IIM8 1120 aa9.7□□□□□ -0.86
HIF1A-209ENST00000556827 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
HIF1A-209ENST00000556827 KLK14Q9P0G3 267 aa9.7□□□□□ -0.86
HIF1A-209ENST00000556827 TNFRSF25Q93038 417 aa9.69□□□□□ -0.86
HIF1A-209ENST00000556827 ITGB2P05107 769 aa9.68□□□□□ -0.86
HIF1A-209ENST00000556827 EPB42P16452 691 aa9.68□□□□□ -0.86
HIF1A-209ENST00000556827 DGKZQ13574 1117 aa9.68□□□□□ -0.86
HIF1A-209ENST00000556827 PNMA5Q96PV4 448 aa9.68□□□□□ -0.86
HIF1A-209ENST00000556827 MDFIQ99750 246 aa9.68□□□□□ -0.86
HIF1A-209ENST00000556827 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
HIF1A-209ENST00000556827 TRIM11Q96F44 468 aa9.67□□□□□ -0.86
HIF1A-209ENST00000556827 UBE2OQ9C0C9 1292 aaKnown RBP9.67□□□□□ -0.86
HIF1A-209ENST00000556827 IGFLR1Q9H665 355 aa9.67□□□□□ -0.86
HIF1A-209ENST00000556827 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
HIF1A-209ENST00000556827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.67□□□□□ -0.86
HIF1A-209ENST00000556827 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
HIF1A-209ENST00000556827 ACIN1Q9UKV3 1341 aaKnown RBP9.66□□□□□ -0.86
HIF1A-209ENST00000556827 M0R082 166 aa9.66□□□□□ -0.86
HIF1A-209ENST00000556827 IDH3AP50213 366 aa9.66□□□□□ -0.86
HIF1A-209ENST00000556827 SWI5Q1ZZU3 235 aa9.66□□□□□ -0.86
HIF1A-209ENST00000556827 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
HIF1A-209ENST00000556827 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
HIF1A-209ENST00000556827 PLVAPQ9BX97 442 aa9.66□□□□□ -0.86
HIF1A-209ENST00000556827 NACADO15069 1562 aa9.66□□□□□ -0.86
HIF1A-209ENST00000556827 PRMT3O60678 531 aa9.65□□□□□ -0.86
HIF1A-209ENST00000556827 PROCP04070 461 aa9.65□□□□□ -0.86
HIF1A-209ENST00000556827 SUZ12Q15022 739 aaKnown RBP9.65□□□□□ -0.86
HIF1A-209ENST00000556827 STK32AQ8WU08 396 aa9.65□□□□□ -0.86
HIF1A-209ENST00000556827 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
HIF1A-209ENST00000556827 ZMIZ1Q9ULJ6 1067 aa9.65□□□□□ -0.86
HIF1A-209ENST00000556827 SPDYE3A6NKU9 549 aa9.64□□□□□ -0.87
HIF1A-209ENST00000556827 ALBP02768 609 aa9.64□□□□□ -0.87
HIF1A-209ENST00000556827 CCINQ13939 588 aa9.64□□□□□ -0.87
HIF1A-209ENST00000556827 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
HIF1A-209ENST00000556827 DMGDHQ9UI17 866 aaKnown RBP9.64□□□□□ -0.87
HIF1A-209ENST00000556827 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.64□□□□□ -0.87
HIF1A-209ENST00000556827 NFKB1P19838 968 aa9.63□□□□□ -0.87
HIF1A-209ENST00000556827 ARSDP51689 593 aa9.63□□□□□ -0.87
HIF1A-209ENST00000556827 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
HIF1A-209ENST00000556827 ELOAQ14241 798 aaKnown RBP9.63□□□□□ -0.87
HIF1A-209ENST00000556827 C11orf91Q3C1V1 193 aa9.63□□□□□ -0.87
HIF1A-209ENST00000556827 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
HIF1A-209ENST00000556827 MYO19Q96H55 970 aa9.63□□□□□ -0.87
HIF1A-209ENST00000556827 GSX2Q9BZM3 304 aa9.63□□□□□ -0.87
HIF1A-209ENST00000556827 STARD13Q9Y3M8 1113 aa9.63□□□□□ -0.87
HIF1A-209ENST00000556827 INPP5BP32019 993 aa9.62□□□□□ -0.87
HIF1A-209ENST00000556827 PRRT3Q5FWE3 981 aa9.62□□□□□ -0.87
HIF1A-209ENST00000556827 MICALL1Q8N3F8 863 aa9.62□□□□□ -0.87
HIF1A-209ENST00000556827 SLC6A14Q9UN76 642 aa9.62□□□□□ -0.87
HIF1A-209ENST00000556827 C1QTNF9BB2RNN3 333 aa9.61□□□□□ -0.87
HIF1A-209ENST00000556827 MICAL2O94851 1124 aa9.61□□□□□ -0.87
HIF1A-209ENST00000556827 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
HIF1A-209ENST00000556827 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
HIF1A-209ENST00000556827 IFT43Q96FT9 208 aa9.61□□□□□ -0.87
HIF1A-209ENST00000556827 ATG7O95352 703 aa9.6□□□□□ -0.87
HIF1A-209ENST00000556827 KRT25Q7Z3Z0 450 aa9.6□□□□□ -0.87
HIF1A-209ENST00000556827 CD163Q86VB7 1156 aa9.6□□□□□ -0.87
HIF1A-209ENST00000556827 PRDM6Q9NQX0 595 aa9.6□□□□□ -0.87
HIF1A-209ENST00000556827 DNAJB12Q9NXW2 375 aaKnown RBP9.6□□□□□ -0.87
HIF1A-209ENST00000556827 LILRB5O75023 590 aa9.59□□□□□ -0.87
HIF1A-209ENST00000556827 CHRNA4P43681 627 aa9.59□□□□□ -0.87
HIF1A-209ENST00000556827 LRFN2Q9ULH4 789 aa9.59□□□□□ -0.87
HIF1A-209ENST00000556827 GRNP28799 593 aaKnown RBP9.58□□□□□ -0.88
HIF1A-209ENST00000556827 BAG6P46379 1132 aa9.58□□□□□ -0.88
HIF1A-209ENST00000556827 OCLNQ16625 522 aa9.58□□□□□ -0.88
HIF1A-209ENST00000556827 TMEM164Q5U3C3 297 aa9.58□□□□□ -0.88
HIF1A-209ENST00000556827 MKNK1Q9BUB5 465 aa9.58□□□□□ -0.88
HIF1A-209ENST00000556827 JPH1Q9HDC5 661 aaPredicted RBP9.58□□□□□ -0.88
HIF1A-209ENST00000556827 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
HIF1A-209ENST00000556827 COX20Q5RI15 118 aa9.57□□□□□ -0.88
HIF1A-209ENST00000556827 TREML1Q86YW5 311 aa9.57□□□□□ -0.88
HIF1A-209ENST00000556827 NUDT8Q8WV74 236 aa9.57□□□□□ -0.88
HIF1A-209ENST00000556827 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
HIF1A-209ENST00000556827 RARAP10276 462 aa9.56□□□□□ -0.88
HIF1A-209ENST00000556827 TRIM28Q13263 835 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms