RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 MKRN1Q9UHC7 482 aaKnown RBP23.98■■□□□ 1.43
PRKCH-210ENST00000554835 NTSR2O95665 410 aa23.97■■□□□ 1.43
PRKCH-210ENST00000554835 ITGBL1O95965 494 aaPredicted RBP23.97■■□□□ 1.43
PRKCH-210ENST00000554835 GIGYF2Q6Y7W6 1299 aaKnown RBP23.97■■□□□ 1.43
PRKCH-210ENST00000554835 TSPYL4Q9UJ04 414 aa23.97■■□□□ 1.43
PRKCH-210ENST00000554835 ERBB4Q15303 1308 aa23.96■■□□□ 1.43
PRKCH-210ENST00000554835 RNF123Q5XPI4 1314 aa23.96■■□□□ 1.43
PRKCH-210ENST00000554835 PROSER3Q2NL68 480 aa23.96■■□□□ 1.43
PRKCH-210ENST00000554835 PNNQ9H307 717 aaKnown RBP23.96■■□□□ 1.43
PRKCH-210ENST00000554835 HACL1Q9UJ83 578 aa23.96■■□□□ 1.43
PRKCH-210ENST00000554835 EPHX2P34913 555 aa23.95■■□□□ 1.42
PRKCH-210ENST00000554835 RIPK4P57078 832 aa23.95■■□□□ 1.42
PRKCH-210ENST00000554835 EAPPQ56P03 285 aaPredicted RBP23.95■■□□□ 1.42
PRKCH-210ENST00000554835 RPGRQ92834 1020 aaKnown RBP23.95■■□□□ 1.42
PRKCH-210ENST00000554835 ANXA1P04083 346 aa23.94■■□□□ 1.42
PRKCH-210ENST00000554835 CNTNAP1P78357 1384 aa23.93■■□□□ 1.42
PRKCH-210ENST00000554835 EIF2S2P20042 333 aaKnown RBP23.93■■□□□ 1.42
PRKCH-210ENST00000554835 CC2D2BQ6DHV5 1058 aa23.93■■□□□ 1.42
PRKCH-210ENST00000554835 TNS4Q8IZW8 715 aa23.93■■□□□ 1.42
PRKCH-210ENST00000554835 GPC2Q8N158 579 aa23.93■■□□□ 1.42
PRKCH-210ENST00000554835 CRAMP1Q96RY5 1269 aa23.93■■□□□ 1.42
PRKCH-210ENST00000554835 LTBP1Q14766 1721 aa23.93■■□□□ 1.42
PRKCH-210ENST00000554835 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
PRKCH-210ENST00000554835 JDP2Q8WYK2 163 aa23.91■■□□□ 1.42
PRKCH-210ENST00000554835 RBM17Q96I25 401 aaKnown RBP23.91■■□□□ 1.42
PRKCH-210ENST00000554835 TCERG1O14776 1098 aaKnown RBP23.9■■□□□ 1.42
PRKCH-210ENST00000554835 PPEF1O14829 653 aaPredicted RBP23.9■■□□□ 1.42
PRKCH-210ENST00000554835 RALBP1Q15311 655 aa23.89■■□□□ 1.41
PRKCH-210ENST00000554835 PARP10Q53GL7 1025 aa23.89■■□□□ 1.41
PRKCH-210ENST00000554835 SLC10A5Q5PT55 438 aa23.89■■□□□ 1.41
PRKCH-210ENST00000554835 MAP1SQ66K74 1059 aaPredicted RBP23.89■■□□□ 1.41
PRKCH-210ENST00000554835 PPP1R42Q7Z4L9 355 aa23.89■■□□□ 1.41
PRKCH-210ENST00000554835 PNMA8AQ86V59 439 aaPredicted RBP23.89■■□□□ 1.41
PRKCH-210ENST00000554835 BABAM1Q9NWV8 329 aa23.89■■□□□ 1.41
PRKCH-210ENST00000554835 CLEC11AQ9Y240 323 aa23.89■■□□□ 1.41
PRKCH-210ENST00000554835 TMEM88BA6NKF7 163 aa23.88■■□□□ 1.41
PRKCH-210ENST00000554835 CAPN15O75808 1086 aa23.88■■□□□ 1.41
PRKCH-210ENST00000554835 CNTROBQ8N137 903 aa23.88■■□□□ 1.41
PRKCH-210ENST00000554835 GJA3Q9Y6H8 435 aa23.88■■□□□ 1.41
PRKCH-210ENST00000554835 VEGFBP49765 207 aa23.87■■□□□ 1.41
PRKCH-210ENST00000554835 SCNN1DP51172 638 aa23.87■■□□□ 1.41
PRKCH-210ENST00000554835 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
PRKCH-210ENST00000554835 GRIPAP1Q4V328 841 aa23.87■■□□□ 1.41
PRKCH-210ENST00000554835 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
PRKCH-210ENST00000554835 UTP14AQ9BVJ6 771 aaKnown RBP23.87■■□□□ 1.41
PRKCH-210ENST00000554835 LAMB2P55268 1798 aa23.86■■□□□ 1.41
PRKCH-210ENST00000554835 ANKRD36CQ5JPF3 1778 aa23.86■■□□□ 1.41
PRKCH-210ENST00000554835 EIF6P56537 245 aaKnown RBP23.86■■□□□ 1.41
PRKCH-210ENST00000554835 COPS6Q7L5N1 327 aa23.86■■□□□ 1.41
PRKCH-210ENST00000554835 CCDC146Q8IYE0 955 aa23.86■■□□□ 1.41
PRKCH-210ENST00000554835 LARGE2Q8N3Y3 721 aa23.86■■□□□ 1.41
PRKCH-210ENST00000554835 NLRP3Q96P20 1036 aa23.86■■□□□ 1.41
PRKCH-210ENST00000554835 EPS15P42566 896 aa23.85■■□□□ 1.41
PRKCH-210ENST00000554835 XAGE3Q8WTP9 111 aa23.85■■□□□ 1.41
PRKCH-210ENST00000554835 ATP6V0A2Q9Y487 856 aa23.85■■□□□ 1.41
PRKCH-210ENST00000554835 ABCC4O15439 1325 aa23.84■■□□□ 1.41
PRKCH-210ENST00000554835 FOXN1O15353 648 aa23.84■■□□□ 1.41
PRKCH-210ENST00000554835 NLRP10Q86W26 655 aa23.84■■□□□ 1.41
PRKCH-210ENST00000554835 CHL1O00533 1208 aa23.83■■□□□ 1.41
PRKCH-210ENST00000554835 LMOD3Q0VAK6 560 aa23.83■■□□□ 1.41
PRKCH-210ENST00000554835 AIMP1Q12904 312 aaKnown RBP23.83■■□□□ 1.41
PRKCH-210ENST00000554835 NEUROD2Q15784 382 aa23.83■■□□□ 1.41
PRKCH-210ENST00000554835 TRIM35Q9UPQ4 493 aa23.83■■□□□ 1.41
PRKCH-210ENST00000554835 HCLS1P14317 486 aaPredicted RBP23.82■■□□□ 1.4
PRKCH-210ENST00000554835 FMR1Q06787 632 aaKnown RBP eCLIP23.82■■□□□ 1.4
PRKCH-210ENST00000554835 AOC3Q16853 763 aa23.82■■□□□ 1.4
PRKCH-210ENST00000554835 RASSF10A6NK89 507 aa23.81■■□□□ 1.4
PRKCH-210ENST00000554835 PPIP5K2O43314 1243 aa23.81■■□□□ 1.4
PRKCH-210ENST00000554835 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
PRKCH-210ENST00000554835 TCIRG1Q13488 830 aa23.81■■□□□ 1.4
PRKCH-210ENST00000554835 DDX21Q9NR30 783 aaKnown RBP eCLIP23.81■■□□□ 1.4
PRKCH-210ENST00000554835 TAF1P21675 1872 aa23.81■■□□□ 1.4
PRKCH-210ENST00000554835 MYBBP1AQ9BQG0 1328 aaKnown RBP23.81■■□□□ 1.4
PRKCH-210ENST00000554835 NIM1KQ8IY84 436 aa23.8■■□□□ 1.4
PRKCH-210ENST00000554835 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
PRKCH-210ENST00000554835 RTFDC1Q9BY42 306 aaPredicted RBP23.8■■□□□ 1.4
PRKCH-210ENST00000554835 LMOD1P29536 600 aaPredicted RBP23.79■■□□□ 1.4
PRKCH-210ENST00000554835 HSP90AB3PQ58FF7 597 aa23.79■■□□□ 1.4
PRKCH-210ENST00000554835 CHPF2Q9P2E5 772 aa23.78■■□□□ 1.4
PRKCH-210ENST00000554835 TRMT112Q9UI30 125 aaKnown RBP23.78■■□□□ 1.4
PRKCH-210ENST00000554835 BBOX1O75936 387 aa23.77■■□□□ 1.4
PRKCH-210ENST00000554835 CXCL9Q07325 125 aa23.77■■□□□ 1.4
PRKCH-210ENST00000554835 DEFB115Q30KQ5 88 aa23.77■■□□□ 1.4
PRKCH-210ENST00000554835 SP8Q8IXZ3 490 aa23.77■■□□□ 1.4
PRKCH-210ENST00000554835 VPS33BQ9H267 617 aa23.77■■□□□ 1.4
PRKCH-210ENST00000554835 WBP1LQ9NX94 342 aa23.77■■□□□ 1.4
PRKCH-210ENST00000554835 LAS1LQ9Y4W2 734 aaKnown RBP23.77■■□□□ 1.4
PRKCH-210ENST00000554835 USP50Q70EL3 339 aaPredicted RBP23.76■■□□□ 1.39
PRKCH-210ENST00000554835 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
PRKCH-210ENST00000554835 GPRC5DQ9NZD1 345 aa23.76■■□□□ 1.39
PRKCH-210ENST00000554835 SH3TC1Q8TE82 1336 aa23.76■■□□□ 1.39
PRKCH-210ENST00000554835 ZNRF3Q9ULT6 936 aa23.75■■□□□ 1.39
PRKCH-210ENST00000554835 ADAMTS8Q9UP79 889 aa23.75■■□□□ 1.39
PRKCH-210ENST00000554835 DDX60Q8IY21 1712 aaKnown RBP23.75■■□□□ 1.39
PRKCH-210ENST00000554835 DUOX1Q9NRD9 1551 aa23.74■■□□□ 1.39
PRKCH-210ENST00000554835 TRAF5O00463 557 aa23.74■■□□□ 1.39
PRKCH-210ENST00000554835 GRAPQ13588 217 aa23.74■■□□□ 1.39
PRKCH-210ENST00000554835 CST9Q5W186 159 aa23.74■■□□□ 1.39
PRKCH-210ENST00000554835 DPP8Q6V1X1 898 aaPredicted RBP23.74■■□□□ 1.39
PRKCH-210ENST00000554835 MPNDQ8N594 471 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms