RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 PDIA6Q15084 440 aa26.85■■□□□ 1.89
NEMP1-204ENST00000554340 CC2D2BQ6DHV5 1058 aa26.85■■□□□ 1.89
NEMP1-204ENST00000554340 SYNE4Q8N205 404 aa26.85■■□□□ 1.89
NEMP1-204ENST00000554340 PSMD1Q99460 953 aa26.85■■□□□ 1.89
NEMP1-204ENST00000554340 PARP10Q53GL7 1025 aa26.84■■□□□ 1.89
NEMP1-204ENST00000554340 PPP1R42Q7Z4L9 355 aa26.84■■□□□ 1.89
NEMP1-204ENST00000554340 TAF1DQ9H5J8 278 aaPredicted RBP26.84■■□□□ 1.89
NEMP1-204ENST00000554340 WDR43Q15061 677 aaKnown RBP eCLIP26.83■■□□□ 1.88
NEMP1-204ENST00000554340 PROSER3Q2NL68 480 aa26.83■■□□□ 1.88
NEMP1-204ENST00000554340 LDHDQ86WU2 507 aa26.83■■□□□ 1.88
NEMP1-204ENST00000554340 FZD9O00144 591 aa26.82■■□□□ 1.88
NEMP1-204ENST00000554340 CRAMP1Q96RY5 1269 aa26.82■■□□□ 1.88
NEMP1-204ENST00000554340 ADAMTSL1Q8N6G6 1762 aa26.82■■□□□ 1.88
NEMP1-204ENST00000554340 LAMB2P55268 1798 aa26.81■■□□□ 1.88
NEMP1-204ENST00000554340 GRIPAP1Q4V328 841 aa26.81■■□□□ 1.88
NEMP1-204ENST00000554340 RBM17Q96I25 401 aaKnown RBP26.81■■□□□ 1.88
NEMP1-204ENST00000554340 ANXA1P04083 346 aa26.8■■□□□ 1.88
NEMP1-204ENST00000554340 CCDC146Q8IYE0 955 aa26.8■■□□□ 1.88
NEMP1-204ENST00000554340 CREBZFQ9NS37 354 aa26.8■■□□□ 1.88
NEMP1-204ENST00000554340 COL4A5P29400 1685 aa26.79■■□□□ 1.88
NEMP1-204ENST00000554340 C3orf67Q6ZVT6 689 aa26.79■■□□□ 1.88
NEMP1-204ENST00000554340 JDP2Q8WYK2 163 aa26.79■■□□□ 1.88
NEMP1-204ENST00000554340 HACL1Q9UJ83 578 aa26.79■■□□□ 1.88
NEMP1-204ENST00000554340 PPEF1O14829 653 aaPredicted RBP26.78■■□□□ 1.88
NEMP1-204ENST00000554340 NEUROD2Q15784 382 aa26.78■■□□□ 1.88
NEMP1-204ENST00000554340 GPC2Q8N158 579 aa26.78■■□□□ 1.88
NEMP1-204ENST00000554340 RUNDC1Q96C34 613 aa26.78■■□□□ 1.88
NEMP1-204ENST00000554340 UTP14AQ9BVJ6 771 aaKnown RBP26.78■■□□□ 1.88
NEMP1-204ENST00000554340 RNF123Q5XPI4 1314 aa26.78■■□□□ 1.88
NEMP1-204ENST00000554340 CHL1O00533 1208 aa26.77■■□□□ 1.88
NEMP1-204ENST00000554340 SLC10A5Q5PT55 438 aa26.77■■□□□ 1.88
NEMP1-204ENST00000554340 NLRP3Q96P20 1036 aa26.77■■□□□ 1.88
NEMP1-204ENST00000554340 PASKQ96RG2 1323 aa26.77■■□□□ 1.88
NEMP1-204ENST00000554340 EPHX2P34913 555 aa26.76■■□□□ 1.87
NEMP1-204ENST00000554340 HSP90AB3PQ58FF7 597 aa26.76■■□□□ 1.87
NEMP1-204ENST00000554340 COPS6Q7L5N1 327 aa26.76■■□□□ 1.87
NEMP1-204ENST00000554340 EAPPQ56P03 285 aaPredicted RBP26.75■■□□□ 1.87
NEMP1-204ENST00000554340 NECTIN2Q92692 538 aa26.75■■□□□ 1.87
NEMP1-204ENST00000554340 TRIM35Q9UPQ4 493 aa26.75■■□□□ 1.87
NEMP1-204ENST00000554340 ZEB1P37275 1124 aaPredicted RBP26.74■■□□□ 1.87
NEMP1-204ENST00000554340 XAGE3Q8WTP9 111 aa26.74■■□□□ 1.87
NEMP1-204ENST00000554340 DDX21Q9NR30 783 aaKnown RBP eCLIP26.74■■□□□ 1.87
NEMP1-204ENST00000554340 EIF6P56537 245 aaKnown RBP26.73■■□□□ 1.87
NEMP1-204ENST00000554340 AIMP1Q12904 312 aaKnown RBP26.73■■□□□ 1.87
NEMP1-204ENST00000554340 KRT24Q2M2I5 525 aa26.73■■□□□ 1.87
NEMP1-204ENST00000554340 COL13A1Q5TAT6 717 aaPredicted RBP26.73■■□□□ 1.87
NEMP1-204ENST00000554340 SLC51AQ86UW1 340 aa26.73■■□□□ 1.87
NEMP1-204ENST00000554340 PNMA8AQ86V59 439 aaPredicted RBP26.73■■□□□ 1.87
NEMP1-204ENST00000554340 TCERG1O14776 1098 aaKnown RBP26.72■■□□□ 1.87
NEMP1-204ENST00000554340 NLRP10Q86W26 655 aa26.72■■□□□ 1.87
NEMP1-204ENST00000554340 LARGE2Q8N3Y3 721 aa26.72■■□□□ 1.87
NEMP1-204ENST00000554340 PRKRIP1Q9H875 184 aaPredicted RBP26.72■■□□□ 1.87
NEMP1-204ENST00000554340 LTBP1Q14766 1721 aa26.72■■□□□ 1.87
NEMP1-204ENST00000554340 ITGBL1O95965 494 aaPredicted RBP26.71■■□□□ 1.87
NEMP1-204ENST00000554340 HSPA1AP0DMV8 641 aaKnown RBP26.71■■□□□ 1.87
NEMP1-204ENST00000554340 HSPA1BP0DMV9 641 aaKnown RBP26.71■■□□□ 1.87
NEMP1-204ENST00000554340 TMX4Q9H1E5 349 aaPredicted RBP26.71■■□□□ 1.87
NEMP1-204ENST00000554340 ADAMTS8Q9UP79 889 aa26.71■■□□□ 1.87
NEMP1-204ENST00000554340 CLEC11AQ9Y240 323 aa26.71■■□□□ 1.87
NEMP1-204ENST00000554340 LAS1LQ9Y4W2 734 aaKnown RBP26.71■■□□□ 1.87
NEMP1-204ENST00000554340 ABCC4O15439 1325 aa26.71■■□□□ 1.87
NEMP1-204ENST00000554340 MKRN1Q9UHC7 482 aaKnown RBP26.71■■□□□ 1.87
NEMP1-204ENST00000554340 ATP6V0A2Q9Y487 856 aa26.71■■□□□ 1.87
NEMP1-204ENST00000554340 TCIRG1Q13488 830 aa26.7■■□□□ 1.86
NEMP1-204ENST00000554340 CHPF2Q9P2E5 772 aa26.7■■□□□ 1.86
NEMP1-204ENST00000554340 GJA3Q9Y6H8 435 aa26.7■■□□□ 1.86
NEMP1-204ENST00000554340 HOXB7P09629 217 aa26.69■■□□□ 1.86
NEMP1-204ENST00000554340 DDX60Q8IY21 1712 aaKnown RBP26.68■■□□□ 1.86
NEMP1-204ENST00000554340 CNTNAP1P78357 1384 aa26.68■■□□□ 1.86
NEMP1-204ENST00000554340 TAF1P21675 1872 aa26.68■■□□□ 1.86
NEMP1-204ENST00000554340 HDGFL1Q5TGJ6 251 aa26.68■■□□□ 1.86
NEMP1-204ENST00000554340 SH3TC1Q8TE82 1336 aa26.67■■□□□ 1.86
NEMP1-204ENST00000554340 HCLS1P14317 486 aaPredicted RBP26.67■■□□□ 1.86
NEMP1-204ENST00000554340 NIM1KQ8IY84 436 aa26.67■■□□□ 1.86
NEMP1-204ENST00000554340 VPS33BQ9H267 617 aa26.67■■□□□ 1.86
NEMP1-204ENST00000554340 TRMT112Q9UI30 125 aaKnown RBP26.67■■□□□ 1.86
NEMP1-204ENST00000554340 TMEM88BA6NKF7 163 aa26.66■■□□□ 1.86
NEMP1-204ENST00000554340 PPIP5K2O43314 1243 aa26.66■■□□□ 1.86
NEMP1-204ENST00000554340 LMOD1P29536 600 aaPredicted RBP26.66■■□□□ 1.86
NEMP1-204ENST00000554340 BBOX1O75936 387 aa26.65■■□□□ 1.86
NEMP1-204ENST00000554340 MAP1SQ66K74 1059 aaPredicted RBP26.65■■□□□ 1.86
NEMP1-204ENST00000554340 CNTROBQ8N137 903 aa26.65■■□□□ 1.86
NEMP1-204ENST00000554340 CFAP44Q96MT7 982 aa26.65■■□□□ 1.86
NEMP1-204ENST00000554340 LRRC37AA6NMS7 1700 aa26.64■■□□□ 1.86
NEMP1-204ENST00000554340 SCNN1DP51172 638 aa26.64■■□□□ 1.86
NEMP1-204ENST00000554340 AOC3Q16853 763 aa26.64■■□□□ 1.86
NEMP1-204ENST00000554340 SP8Q8IXZ3 490 aa26.64■■□□□ 1.86
NEMP1-204ENST00000554340 SUPT20HQ8NEM7 779 aa26.64■■□□□ 1.86
NEMP1-204ENST00000554340 PLBD2Q8NHP8 589 aa26.64■■□□□ 1.86
NEMP1-204ENST00000554340 RTFDC1Q9BY42 306 aaPredicted RBP26.64■■□□□ 1.86
NEMP1-204ENST00000554340 DBF4Q9UBU7 674 aaPredicted RBP26.64■■□□□ 1.86
NEMP1-204ENST00000554340 DDX46Q7L014 1031 aaKnown RBP26.63■■□□□ 1.85
NEMP1-204ENST00000554340 EPS15P42566 896 aa26.61■■□□□ 1.85
NEMP1-204ENST00000554340 GRAPQ13588 217 aa26.61■■□□□ 1.85
NEMP1-204ENST00000554340 DPP8Q6V1X1 898 aaPredicted RBP26.61■■□□□ 1.85
NEMP1-204ENST00000554340 ANKRD13DQ6ZTN6 518 aa26.61■■□□□ 1.85
NEMP1-204ENST00000554340 TNS4Q8IZW8 715 aa26.61■■□□□ 1.85
NEMP1-204ENST00000554340 GRAPLQ8TC17 118 aaPredicted RBP26.61■■□□□ 1.85
NEMP1-204ENST00000554340 DUSP27Q5VZP5 1158 aa26.6■■□□□ 1.85
NEMP1-204ENST00000554340 MPNDQ8N594 471 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms