RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 PCNTO95613 3336 aa28.68■■■□□ 2.18
RCCD1-202ENST00000554302 CHL1O00533 1208 aa28.67■■■□□ 2.18
RCCD1-202ENST00000554302 PROSER3Q2NL68 480 aa28.67■■■□□ 2.18
RCCD1-202ENST00000554302 CCDC146Q8IYE0 955 aa28.67■■■□□ 2.18
RCCD1-202ENST00000554302 RUNDC1Q96C34 613 aa28.67■■■□□ 2.18
RCCD1-202ENST00000554302 L3MBTL3Q96JM7 780 aaPredicted RBP28.67■■■□□ 2.18
RCCD1-202ENST00000554302 ZNF277Q9NRM2 450 aaPredicted RBP28.67■■■□□ 2.18
RCCD1-202ENST00000554302 TRIM35Q9UPQ4 493 aa28.67■■■□□ 2.18
RCCD1-202ENST00000554302 PARP10Q53GL7 1025 aa28.65■■■□□ 2.18
RCCD1-202ENST00000554302 PSMD1Q99460 953 aa28.65■■■□□ 2.18
RCCD1-202ENST00000554302 NEUROD2Q15784 382 aa28.64■■■□□ 2.18
RCCD1-202ENST00000554302 CC2D2BQ6DHV5 1058 aa28.64■■■□□ 2.18
RCCD1-202ENST00000554302 PPP1R42Q7Z4L9 355 aa28.64■■■□□ 2.18
RCCD1-202ENST00000554302 SYNE4Q8N205 404 aa28.64■■■□□ 2.18
RCCD1-202ENST00000554302 ADAMTS8Q9UP79 889 aa28.64■■■□□ 2.18
RCCD1-202ENST00000554302 ANXA1P04083 346 aa28.63■■■□□ 2.17
RCCD1-202ENST00000554302 IARSP41252 1262 aaKnown RBP28.63■■■□□ 2.17
RCCD1-202ENST00000554302 CRAMP1Q96RY5 1269 aa28.63■■■□□ 2.17
RCCD1-202ENST00000554302 SCN4AP35499 1836 aa28.63■■■□□ 2.17
RCCD1-202ENST00000554302 WDR43Q15061 677 aaKnown RBP eCLIP28.62■■■□□ 2.17
RCCD1-202ENST00000554302 SLC10A5Q5PT55 438 aa28.62■■■□□ 2.17
RCCD1-202ENST00000554302 RPGRQ92834 1020 aaKnown RBP28.62■■■□□ 2.17
RCCD1-202ENST00000554302 IQCA1LA6NCM1 817 aa28.61■■■□□ 2.17
RCCD1-202ENST00000554302 FZD9O00144 591 aa28.61■■■□□ 2.17
RCCD1-202ENST00000554302 POTEIP0CG38 1075 aa28.61■■■□□ 2.17
RCCD1-202ENST00000554302 POTEJP0CG39 1038 aa28.61■■■□□ 2.17
RCCD1-202ENST00000554302 CHADLQ6NUI6 762 aa28.61■■■□□ 2.17
RCCD1-202ENST00000554302 C3orf67Q6ZVT6 689 aa28.61■■■□□ 2.17
RCCD1-202ENST00000554302 PRKRIP1Q9H875 184 aaPredicted RBP28.61■■■□□ 2.17
RCCD1-202ENST00000554302 ZNF541Q9H0D2 1346 aa28.61■■■□□ 2.17
RCCD1-202ENST00000554302 COPS6Q7L5N1 327 aa28.6■■■□□ 2.17
RCCD1-202ENST00000554302 DDX21Q9NR30 783 aaKnown RBP eCLIP28.6■■■□□ 2.17
RCCD1-202ENST00000554302 ANKRD36CQ5JPF3 1778 aa28.6■■■□□ 2.17
RCCD1-202ENST00000554302 KRT24Q2M2I5 525 aa28.59■■■□□ 2.17
RCCD1-202ENST00000554302 GRIPAP1Q4V328 841 aa28.59■■■□□ 2.17
RCCD1-202ENST00000554302 RBM17Q96I25 401 aaKnown RBP28.59■■■□□ 2.17
RCCD1-202ENST00000554302 TAF1DQ9H5J8 278 aaPredicted RBP28.59■■■□□ 2.17
RCCD1-202ENST00000554302 RNF123Q5XPI4 1314 aa28.59■■■□□ 2.17
RCCD1-202ENST00000554302 XAGE3Q8WTP9 111 aa28.58■■■□□ 2.17
RCCD1-202ENST00000554302 NECTIN2Q92692 538 aa28.58■■■□□ 2.17
RCCD1-202ENST00000554302 UTP14AQ9BVJ6 771 aaKnown RBP28.58■■■□□ 2.17
RCCD1-202ENST00000554302 SLC4A2P04920 1241 aa28.57■■■□□ 2.16
RCCD1-202ENST00000554302 HSP90AB3PQ58FF7 597 aa28.57■■■□□ 2.16
RCCD1-202ENST00000554302 NLRP3Q96P20 1036 aa28.57■■■□□ 2.16
RCCD1-202ENST00000554302 HOXB7P09629 217 aa28.56■■■□□ 2.16
RCCD1-202ENST00000554302 COL4A5P29400 1685 aa28.56■■■□□ 2.16
RCCD1-202ENST00000554302 PPEF1O14829 653 aaPredicted RBP28.55■■■□□ 2.16
RCCD1-202ENST00000554302 NLRP10Q86W26 655 aa28.55■■■□□ 2.16
RCCD1-202ENST00000554302 LDHDQ86WU2 507 aa28.55■■■□□ 2.16
RCCD1-202ENST00000554302 AIMP1Q12904 312 aaKnown RBP28.54■■■□□ 2.16
RCCD1-202ENST00000554302 TCIRG1Q13488 830 aa28.54■■■□□ 2.16
RCCD1-202ENST00000554302 SLC51AQ86UW1 340 aa28.54■■■□□ 2.16
RCCD1-202ENST00000554302 CFAP44Q96MT7 982 aa28.54■■■□□ 2.16
RCCD1-202ENST00000554302 ADAMTSL1Q8N6G6 1762 aa28.53■■■□□ 2.16
RCCD1-202ENST00000554302 GPC2Q8N158 579 aa28.53■■■□□ 2.16
RCCD1-202ENST00000554302 LAS1LQ9Y4W2 734 aaKnown RBP28.53■■■□□ 2.16
RCCD1-202ENST00000554302 PASKQ96RG2 1323 aa28.52■■■□□ 2.16
RCCD1-202ENST00000554302 JDP2Q8WYK2 163 aa28.52■■■□□ 2.16
RCCD1-202ENST00000554302 CHPF2Q9P2E5 772 aa28.52■■■□□ 2.16
RCCD1-202ENST00000554302 HACL1Q9UJ83 578 aa28.52■■■□□ 2.16
RCCD1-202ENST00000554302 CREBZFQ9NS37 354 aa28.51■■■□□ 2.15
RCCD1-202ENST00000554302 LAMB2P55268 1798 aa28.51■■■□□ 2.15
RCCD1-202ENST00000554302 ABCC4O15439 1325 aa28.5■■■□□ 2.15
RCCD1-202ENST00000554302 ZNF853P0CG23 659 aa28.5■■■□□ 2.15
RCCD1-202ENST00000554302 HDGFL1Q5TGJ6 251 aa28.5■■■□□ 2.15
RCCD1-202ENST00000554302 ATP6V0A2Q9Y487 856 aa28.5■■■□□ 2.15
RCCD1-202ENST00000554302 EPHX2P34913 555 aa28.49■■■□□ 2.15
RCCD1-202ENST00000554302 ITGBL1O95965 494 aaPredicted RBP28.48■■■□□ 2.15
RCCD1-202ENST00000554302 PLBD2Q8NHP8 589 aa28.48■■■□□ 2.15
RCCD1-202ENST00000554302 DBF4Q9UBU7 674 aaPredicted RBP28.48■■■□□ 2.15
RCCD1-202ENST00000554302 TCERG1O14776 1098 aaKnown RBP28.47■■■□□ 2.15
RCCD1-202ENST00000554302 VPS33BQ9H267 617 aa28.47■■■□□ 2.15
RCCD1-202ENST00000554302 MBIPQ9NS73 344 aa28.47■■■□□ 2.15
RCCD1-202ENST00000554302 TRMT112Q9UI30 125 aaKnown RBP28.47■■■□□ 2.15
RCCD1-202ENST00000554302 SH3TC1Q8TE82 1336 aa28.46■■■□□ 2.15
RCCD1-202ENST00000554302 BBOX1O75936 387 aa28.46■■■□□ 2.15
RCCD1-202ENST00000554302 HCLS1P14317 486 aaPredicted RBP28.46■■■□□ 2.15
RCCD1-202ENST00000554302 EIF6P56537 245 aaKnown RBP28.46■■■□□ 2.15
RCCD1-202ENST00000554302 PNMA8AQ86V59 439 aaPredicted RBP28.46■■■□□ 2.15
RCCD1-202ENST00000554302 LARGE2Q8N3Y3 721 aa28.46■■■□□ 2.15
RCCD1-202ENST00000554302 RTFDC1Q9BY42 306 aaPredicted RBP28.46■■■□□ 2.15
RCCD1-202ENST00000554302 EAPPQ56P03 285 aaPredicted RBP28.45■■■□□ 2.14
RCCD1-202ENST00000554302 DUSP27Q5VZP5 1158 aa28.45■■■□□ 2.14
RCCD1-202ENST00000554302 ANKRD13DQ6ZTN6 518 aa28.45■■■□□ 2.14
RCCD1-202ENST00000554302 ISCA1Q9BUE6 129 aa28.45■■■□□ 2.14
RCCD1-202ENST00000554302 LTBP1Q14766 1721 aa28.44■■■□□ 2.14
RCCD1-202ENST00000554302 APAF1O14727 1248 aa28.44■■■□□ 2.14
RCCD1-202ENST00000554302 SP8Q8IXZ3 490 aa28.44■■■□□ 2.14
RCCD1-202ENST00000554302 TMX4Q9H1E5 349 aaPredicted RBP28.43■■■□□ 2.14
RCCD1-202ENST00000554302 IFT57Q9NWB7 429 aa28.43■■■□□ 2.14
RCCD1-202ENST00000554302 HYPKQ9NX55 129 aa28.43■■■□□ 2.14
RCCD1-202ENST00000554302 DDX60Q8IY21 1712 aaKnown RBP28.42■■■□□ 2.14
RCCD1-202ENST00000554302 PPIP5K2O43314 1243 aa28.41■■■□□ 2.14
RCCD1-202ENST00000554302 SCNN1DP51172 638 aa28.41■■■□□ 2.14
RCCD1-202ENST00000554302 GJA3Q9Y6H8 435 aa28.41■■■□□ 2.14
RCCD1-202ENST00000554302 GRAPQ13588 217 aa28.4■■■□□ 2.14
RCCD1-202ENST00000554302 AOC3Q16853 763 aa28.4■■■□□ 2.14
RCCD1-202ENST00000554302 DDX46Q7L014 1031 aaKnown RBP28.4■■■□□ 2.14
RCCD1-202ENST00000554302 NIM1KQ8IY84 436 aa28.4■■■□□ 2.14
RCCD1-202ENST00000554302 SUPT20HQ8NEM7 779 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms