RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 PROSER3Q2NL68 480 aa20.71■□□□□ 0.91
TUBB3-203ENST00000553967 PARP10Q53GL7 1025 aa20.71■□□□□ 0.91
TUBB3-203ENST00000553967 PPP1R42Q7Z4L9 355 aa20.71■□□□□ 0.91
TUBB3-203ENST00000553967 PSMD1Q99460 953 aa20.71■□□□□ 0.91
TUBB3-203ENST00000553967 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
TUBB3-203ENST00000553967 ANXA1P04083 346 aa20.7■□□□□ 0.9
TUBB3-203ENST00000553967 CC2D2BQ6DHV5 1058 aa20.7■□□□□ 0.9
TUBB3-203ENST00000553967 RBM17Q96I25 401 aaKnown RBP20.69■□□□□ 0.9
TUBB3-203ENST00000553967 TAF1DQ9H5J8 278 aaPredicted RBP20.69■□□□□ 0.9
TUBB3-203ENST00000553967 SCN4AP35499 1836 aa20.69■□□□□ 0.9
TUBB3-203ENST00000553967 SNED1Q8TER0 1413 aa20.69■□□□□ 0.9
TUBB3-203ENST00000553967 FZD9O00144 591 aa20.68■□□□□ 0.9
TUBB3-203ENST00000553967 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
TUBB3-203ENST00000553967 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
TUBB3-203ENST00000553967 LDHDQ86WU2 507 aa20.68■□□□□ 0.9
TUBB3-203ENST00000553967 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
TUBB3-203ENST00000553967 RUNDC1Q96C34 613 aa20.68■□□□□ 0.9
TUBB3-203ENST00000553967 CRAMP1Q96RY5 1269 aa20.68■□□□□ 0.9
TUBB3-203ENST00000553967 CHL1O00533 1208 aa20.67■□□□□ 0.9
TUBB3-203ENST00000553967 GRIPAP1Q4V328 841 aa20.67■□□□□ 0.9
TUBB3-203ENST00000553967 JDP2Q8WYK2 163 aa20.67■□□□□ 0.9
TUBB3-203ENST00000553967 NLRP3Q96P20 1036 aa20.67■□□□□ 0.9
TUBB3-203ENST00000553967 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
TUBB3-203ENST00000553967 HACL1Q9UJ83 578 aa20.67■□□□□ 0.9
TUBB3-203ENST00000553967 PPEF1O14829 653 aaPredicted RBP20.66■□□□□ 0.9
TUBB3-203ENST00000553967 COPS6Q7L5N1 327 aa20.66■□□□□ 0.9
TUBB3-203ENST00000553967 TRIM35Q9UPQ4 493 aa20.66■□□□□ 0.9
TUBB3-203ENST00000553967 TCERG1O14776 1098 aaKnown RBP20.65■□□□□ 0.9
TUBB3-203ENST00000553967 AIMP1Q12904 312 aaKnown RBP20.65■□□□□ 0.9
TUBB3-203ENST00000553967 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
TUBB3-203ENST00000553967 SLC10A5Q5PT55 438 aa20.65■□□□□ 0.9
TUBB3-203ENST00000553967 XAGE3Q8WTP9 111 aa20.65■□□□□ 0.9
TUBB3-203ENST00000553967 CREBZFQ9NS37 354 aa20.65■□□□□ 0.9
TUBB3-203ENST00000553967 ADAMTS8Q9UP79 889 aa20.65■□□□□ 0.9
TUBB3-203ENST00000553967 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
TUBB3-203ENST00000553967 EAPPQ56P03 285 aaPredicted RBP20.64■□□□□ 0.89
TUBB3-203ENST00000553967 HSP90AB3PQ58FF7 597 aa20.64■□□□□ 0.89
TUBB3-203ENST00000553967 GPC2Q8N158 579 aa20.64■□□□□ 0.89
TUBB3-203ENST00000553967 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.89
TUBB3-203ENST00000553967 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
TUBB3-203ENST00000553967 EPHX2P34913 555 aa20.63■□□□□ 0.89
TUBB3-203ENST00000553967 SLC51AQ86UW1 340 aa20.63■□□□□ 0.89
TUBB3-203ENST00000553967 PASKQ96RG2 1323 aa20.62■□□□□ 0.89
TUBB3-203ENST00000553967 EIF6P56537 245 aaKnown RBP20.62■□□□□ 0.89
TUBB3-203ENST00000553967 TCIRG1Q13488 830 aa20.62■□□□□ 0.89
TUBB3-203ENST00000553967 NLRP10Q86W26 655 aa20.62■□□□□ 0.89
TUBB3-203ENST00000553967 LARGE2Q8N3Y3 721 aa20.62■□□□□ 0.89
TUBB3-203ENST00000553967 COL4A5P29400 1685 aa20.61■□□□□ 0.89
TUBB3-203ENST00000553967 COL13A1Q5TAT6 717 aaPredicted RBP20.61■□□□□ 0.89
TUBB3-203ENST00000553967 PNMA8AQ86V59 439 aaPredicted RBP20.61■□□□□ 0.89
TUBB3-203ENST00000553967 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
TUBB3-203ENST00000553967 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
TUBB3-203ENST00000553967 ATP6V0A2Q9Y487 856 aa20.61■□□□□ 0.89
TUBB3-203ENST00000553967 ITGBL1O95965 494 aaPredicted RBP20.6■□□□□ 0.89
TUBB3-203ENST00000553967 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
TUBB3-203ENST00000553967 MKRN1Q9UHC7 482 aaKnown RBP20.6■□□□□ 0.89
TUBB3-203ENST00000553967 TRMT112Q9UI30 125 aaKnown RBP20.6■□□□□ 0.89
TUBB3-203ENST00000553967 GJA3Q9Y6H8 435 aa20.6■□□□□ 0.89
TUBB3-203ENST00000553967 ANKRD36CQ5JPF3 1778 aa20.59■□□□□ 0.89
TUBB3-203ENST00000553967 ABCC4O15439 1325 aa20.59■□□□□ 0.89
TUBB3-203ENST00000553967 HSPA1AP0DMV8 641 aaKnown RBP20.59■□□□□ 0.89
TUBB3-203ENST00000553967 HSPA1BP0DMV9 641 aaKnown RBP20.59■□□□□ 0.89
TUBB3-203ENST00000553967 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-203ENST00000553967 HDGFL1Q5TGJ6 251 aa20.59■□□□□ 0.89
TUBB3-203ENST00000553967 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-203ENST00000553967 HOXB7P09629 217 aa20.58■□□□□ 0.89
TUBB3-203ENST00000553967 CFAP44Q96MT7 982 aa20.58■□□□□ 0.89
TUBB3-203ENST00000553967 SH3TC1Q8TE82 1336 aa20.57■□□□□ 0.88
TUBB3-203ENST00000553967 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
TUBB3-203ENST00000553967 PPIP5K2O43314 1243 aa20.57■□□□□ 0.88
TUBB3-203ENST00000553967 BBOX1O75936 387 aa20.57■□□□□ 0.88
TUBB3-203ENST00000553967 NIM1KQ8IY84 436 aa20.57■□□□□ 0.88
TUBB3-203ENST00000553967 VPS33BQ9H267 617 aa20.57■□□□□ 0.88
TUBB3-203ENST00000553967 TMEM88BA6NKF7 163 aa20.56■□□□□ 0.88
TUBB3-203ENST00000553967 LMOD1P29536 600 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-203ENST00000553967 AOC3Q16853 763 aa20.56■□□□□ 0.88
TUBB3-203ENST00000553967 MAP1SQ66K74 1059 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-203ENST00000553967 ANKRD13DQ6ZTN6 518 aa20.56■□□□□ 0.88
TUBB3-203ENST00000553967 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
TUBB3-203ENST00000553967 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
TUBB3-203ENST00000553967 DBF4Q9UBU7 674 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-203ENST00000553967 LAMB2P55268 1798 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 SCNN1DP51172 638 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 DUSP27Q5VZP5 1158 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
TUBB3-203ENST00000553967 SP8Q8IXZ3 490 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 SUPT20HQ8NEM7 779 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 ZNF428Q96B54 188 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 MBIPQ9NS73 344 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 CNTNAP1P78357 1384 aa20.55■□□□□ 0.88
TUBB3-203ENST00000553967 EPS15P42566 896 aa20.54■□□□□ 0.88
TUBB3-203ENST00000553967 DPP8Q6V1X1 898 aaPredicted RBP20.54■□□□□ 0.88
TUBB3-203ENST00000553967 RTFDC1Q9BY42 306 aaPredicted RBP20.54■□□□□ 0.88
TUBB3-203ENST00000553967 GRAPQ13588 217 aa20.53■□□□□ 0.88
TUBB3-203ENST00000553967 MPNDQ8N594 471 aa20.53■□□□□ 0.88
TUBB3-203ENST00000553967 GRAPLQ8TC17 118 aaPredicted RBP20.53■□□□□ 0.88
TUBB3-203ENST00000553967 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
TUBB3-203ENST00000553967 LTBP1Q14766 1721 aa20.53■□□□□ 0.88
TUBB3-203ENST00000553967 APAF1O14727 1248 aa20.52■□□□□ 0.88
TUBB3-203ENST00000553967 ISCA1Q9BUE6 129 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms