RNA–Protein interactions for RNA: ENST00000552564.5

ITGA5-211, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 4,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-211ENST00000552564 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
ITGA5-211ENST00000552564 KIF5BP33176 963 aa16.16■□□□□ 0.18
ITGA5-211ENST00000552564 IFIT5Q13325 482 aaKnown RBP16.16■□□□□ 0.18
ITGA5-211ENST00000552564 TRMT1Q9NXH9 659 aaKnown RBP16.16■□□□□ 0.18
ITGA5-211ENST00000552564 UBE2Q2Q8WVN8 375 aa16.16■□□□□ 0.18
ITGA5-211ENST00000552564 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
ITGA5-211ENST00000552564 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
ITGA5-211ENST00000552564 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
ITGA5-211ENST00000552564 ARFGAP3Q9NP61 516 aa16.16■□□□□ 0.18
ITGA5-211ENST00000552564 STXBP4Q6ZWJ1 553 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 PRDM11Q9NQV5 511 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 ZFYP08048 801 aaPredicted RBP16.15■□□□□ 0.18
ITGA5-211ENST00000552564 SLF2Q8IX21 1173 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 SMC5Q8IY18 1101 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 PARD3Q8TEW0 1356 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 IFIT3O14879 490 aaKnown RBP16.15■□□□□ 0.18
ITGA5-211ENST00000552564 MTIF2P46199 727 aaKnown RBP16.15■□□□□ 0.18
ITGA5-211ENST00000552564 CALML4Q96GE6 196 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 STAMBPO95630 424 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 TDRD12Q587J7 1177 aaKnown RBP16.15■□□□□ 0.18
ITGA5-211ENST00000552564 CCDC178Q5BJE1 867 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 SPECC1Q5M775 1068 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 NCOA7Q8NI08 942 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 THUMPD2Q9BTF0 503 aaKnown RBP16.15■□□□□ 0.18
ITGA5-211ENST00000552564 EHMT1Q9H9B1 1298 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 ORC3Q9UBD5 711 aaPredicted RBP16.15■□□□□ 0.18
ITGA5-211ENST00000552564 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
ITGA5-211ENST00000552564 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITGA5-211ENST00000552564 GNG11P61952 73 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 CCDC172P0C7W6 258 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 XRCC6P12956 609 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITGA5-211ENST00000552564 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 CYLC1P35663 651 aaPredicted RBP16.14■□□□□ 0.17
ITGA5-211ENST00000552564 STK11IPQ8N1F8 1099 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 ANKRD24Q8TF21 1146 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 MKNK2Q9HBH9 465 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 GSTTP1A0A1W2PQM5 241 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
ITGA5-211ENST00000552564 IGHDP01880 384 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 PRKCSHP14314 528 aaPredicted RBP16.14■□□□□ 0.17
ITGA5-211ENST00000552564 HOOK3Q86VS8 718 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 DDX54Q8TDD1 881 aaKnown RBP16.14■□□□□ 0.17
ITGA5-211ENST00000552564 INTS4Q96HW7 963 aaKnown RBP16.14■□□□□ 0.17
ITGA5-211ENST00000552564 MYD88Q99836 296 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 TMOD2Q9NZR1 351 aa16.14■□□□□ 0.17
ITGA5-211ENST00000552564 HCLS1P14317 486 aaPredicted RBP16.13■□□□□ 0.17
ITGA5-211ENST00000552564 CEP112Q8N8E3 955 aa16.13■□□□□ 0.17
ITGA5-211ENST00000552564 UHRF1BP1Q6BDS2 1440 aa16.13■□□□□ 0.17
ITGA5-211ENST00000552564 NLRP5P59047 1200 aa16.13■□□□□ 0.17
ITGA5-211ENST00000552564 TMTC2Q8N394 836 aa16.13■□□□□ 0.17
ITGA5-211ENST00000552564 ANKRD44Q8N8A2 993 aa16.13■□□□□ 0.17
ITGA5-211ENST00000552564 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
ITGA5-211ENST00000552564 RNF187Q5TA31 235 aaPredicted RBP16.13■□□□□ 0.17
ITGA5-211ENST00000552564 ABCF2Q9UG63 623 aa16.13■□□□□ 0.17
ITGA5-211ENST00000552564 USP5P45974 858 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
ITGA5-211ENST00000552564 SLU7O95391 586 aaKnown RBP16.12■□□□□ 0.17
ITGA5-211ENST00000552564 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
ITGA5-211ENST00000552564 PLVAPQ9BX97 442 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 TEX14Q8IWB6 1497 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 CTAGE15A4D2H0 777 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 CTAGE8P0CG41 777 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 CTAGE6Q86UF2 777 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 CTAGE4Q8IX94 777 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 CCDC8Q9H0W5 538 aaPredicted RBP16.12■□□□□ 0.17
ITGA5-211ENST00000552564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.12■□□□□ 0.17
ITGA5-211ENST00000552564 ANKRD18BA2A2Z9 1011 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 HSF2BPO75031 334 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
ITGA5-211ENST00000552564 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
ITGA5-211ENST00000552564 TFIP11Q9UBB9 837 aaKnown RBP16.12■□□□□ 0.17
ITGA5-211ENST00000552564 SKILP12757 684 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 HLTFQ14527 1009 aaKnown RBP eCLIP16.11■□□□□ 0.17
ITGA5-211ENST00000552564 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
ITGA5-211ENST00000552564 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
ITGA5-211ENST00000552564 CCDC113Q9H0I3 377 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 OPA1O60313 960 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 POLR3DP05423 398 aaPredicted RBP16.11■□□□□ 0.17
ITGA5-211ENST00000552564 SSR1P43307 286 aaKnown RBP16.11■□□□□ 0.17
ITGA5-211ENST00000552564 SYKP43405 635 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 LMAN1P49257 510 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 RAB3GAP1Q15042 981 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 ATL3Q6DD88 541 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 FEZ1Q99689 392 aa16.11■□□□□ 0.17
ITGA5-211ENST00000552564 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
ITGA5-211ENST00000552564 UBA7P41226 1012 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 UBASH3AP57075 661 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.17
ITGA5-211ENST00000552564 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 UQCRFS1P1P0C7P4 283 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 PIP4K2BP78356 416 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 CUL5Q93034 780 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 MAST1Q9Y2H9 1570 aa16.1■□□□□ 0.17
ITGA5-211ENST00000552564 LDHCP07864 332 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms