RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-209ENST00000551424 ANXA1P04083 346 aa30.04■■■□□ 2.4
CNTN1-209ENST00000551424 RALBP1Q15311 655 aa30.04■■■□□ 2.4
CNTN1-209ENST00000551424 CLEC11AQ9Y240 323 aa30.04■■■□□ 2.4
CNTN1-209ENST00000551424 SNED1Q8TER0 1413 aa30.04■■■□□ 2.4
CNTN1-209ENST00000551424 RNF123Q5XPI4 1314 aa30.03■■■□□ 2.4
CNTN1-209ENST00000551424 JDP2Q8WYK2 163 aa30.03■■■□□ 2.4
CNTN1-209ENST00000551424 HOXA10P31260 410 aaPredicted RBP30.02■■■□□ 2.4
CNTN1-209ENST00000551424 PROSER3Q2NL68 480 aa30.02■■■□□ 2.4
CNTN1-209ENST00000551424 CC2D2BQ6DHV5 1058 aa30.02■■■□□ 2.4
CNTN1-209ENST00000551424 SLC51AQ86UW1 340 aa30.02■■■□□ 2.4
CNTN1-209ENST00000551424 NECTIN2Q92692 538 aa30.02■■■□□ 2.4
CNTN1-209ENST00000551424 RBM17Q96I25 401 aaKnown RBP30.02■■■□□ 2.4
CNTN1-209ENST00000551424 PSMD1Q99460 953 aa30.02■■■□□ 2.4
CNTN1-209ENST00000551424 FZD9O00144 591 aa30.01■■■□□ 2.39
CNTN1-209ENST00000551424 EPHX2P34913 555 aa30.01■■■□□ 2.39
CNTN1-209ENST00000551424 TMPOP42166 694 aaKnown RBP30.01■■■□□ 2.39
CNTN1-209ENST00000551424 LMOD3Q0VAK6 560 aa30.01■■■□□ 2.39
CNTN1-209ENST00000551424 C3orf67Q6ZVT6 689 aa30.01■■■□□ 2.39
CNTN1-209ENST00000551424 PPP1R42Q7Z4L9 355 aa30.01■■■□□ 2.39
CNTN1-209ENST00000551424 PPEF1O14829 653 aaPredicted RBP30■■■□□ 2.39
CNTN1-209ENST00000551424 PDIA6Q15084 440 aa30■■■□□ 2.39
CNTN1-209ENST00000551424 NEUROD2Q15784 382 aa30■■■□□ 2.39
CNTN1-209ENST00000551424 PARP10Q53GL7 1025 aa30■■■□□ 2.39
CNTN1-209ENST00000551424 CCDC146Q8IYE0 955 aa30■■■□□ 2.39
CNTN1-209ENST00000551424 GJA3Q9Y6H8 435 aa30■■■□□ 2.39
CNTN1-209ENST00000551424 COL4A5P29400 1685 aa29.99■■■□□ 2.39
CNTN1-209ENST00000551424 LRP10Q7Z4F1 713 aa29.99■■■□□ 2.39
CNTN1-209ENST00000551424 TNS4Q8IZW8 715 aa29.99■■■□□ 2.39
CNTN1-209ENST00000551424 PASKQ96RG2 1323 aa29.98■■■□□ 2.39
CNTN1-209ENST00000551424 EIF6P56537 245 aaKnown RBP29.98■■■□□ 2.39
CNTN1-209ENST00000551424 GPC2Q8N158 579 aa29.98■■■□□ 2.39
CNTN1-209ENST00000551424 CRAMP1Q96RY5 1269 aa29.98■■■□□ 2.39
CNTN1-209ENST00000551424 CAPN15O75808 1086 aa29.97■■■□□ 2.39
CNTN1-209ENST00000551424 AIMP1Q12904 312 aaKnown RBP29.97■■■□□ 2.39
CNTN1-209ENST00000551424 DDX10Q13206 875 aaKnown RBP29.97■■■□□ 2.39
CNTN1-209ENST00000551424 LARGE2Q8N3Y3 721 aa29.97■■■□□ 2.39
CNTN1-209ENST00000551424 UTP14AQ9BVJ6 771 aaKnown RBP29.97■■■□□ 2.39
CNTN1-209ENST00000551424 ADAMTSL1Q8N6G6 1762 aa29.96■■■□□ 2.39
CNTN1-209ENST00000551424 NLRP3Q96P20 1036 aa29.96■■■□□ 2.39
CNTN1-209ENST00000551424 BABAM1Q9NWV8 329 aa29.96■■■□□ 2.39
CNTN1-209ENST00000551424 ANKRD36CQ5JPF3 1778 aa29.95■■■□□ 2.39
CNTN1-209ENST00000551424 LAS1LQ9Y4W2 734 aaKnown RBP29.95■■■□□ 2.39
CNTN1-209ENST00000551424 ITGBL1O95965 494 aaPredicted RBP29.94■■■□□ 2.38
CNTN1-209ENST00000551424 MAP1SQ66K74 1059 aaPredicted RBP29.94■■■□□ 2.38
CNTN1-209ENST00000551424 COPS6Q7L5N1 327 aa29.94■■■□□ 2.38
CNTN1-209ENST00000551424 PNMA8AQ86V59 439 aaPredicted RBP29.94■■■□□ 2.38
CNTN1-209ENST00000551424 XAGE3Q8WTP9 111 aa29.94■■■□□ 2.38
CNTN1-209ENST00000551424 MYBBP1AQ9BQG0 1328 aaKnown RBP29.94■■■□□ 2.38
CNTN1-209ENST00000551424 CNTNAP1P78357 1384 aa29.93■■■□□ 2.38
CNTN1-209ENST00000551424 KRT24Q2M2I5 525 aa29.93■■■□□ 2.38
CNTN1-209ENST00000551424 TMEM88BA6NKF7 163 aa29.92■■■□□ 2.38
CNTN1-209ENST00000551424 GRIPAP1Q4V328 841 aa29.92■■■□□ 2.38
CNTN1-209ENST00000551424 TMX4Q9H1E5 349 aaPredicted RBP29.92■■■□□ 2.38
CNTN1-209ENST00000551424 LMOD1P29536 600 aaPredicted RBP29.91■■■□□ 2.38
CNTN1-209ENST00000551424 NIM1KQ8IY84 436 aa29.91■■■□□ 2.38
CNTN1-209ENST00000551424 LAMB2P55268 1798 aa29.9■■■□□ 2.38
CNTN1-209ENST00000551424 PPIP5K2O43314 1243 aa29.9■■■□□ 2.38
CNTN1-209ENST00000551424 WDR43Q15061 677 aaKnown RBP eCLIP29.9■■■□□ 2.38
CNTN1-209ENST00000551424 HSP90AB3PQ58FF7 597 aa29.9■■■□□ 2.38
CNTN1-209ENST00000551424 CNTROBQ8N137 903 aa29.9■■■□□ 2.38
CNTN1-209ENST00000551424 PCNTO95613 3336 aa29.9■■■□□ 2.38
CNTN1-209ENST00000551424 LTBP1Q14766 1721 aa29.9■■■□□ 2.38
CNTN1-209ENST00000551424 ABCC4O15439 1325 aa29.9■■■□□ 2.38
CNTN1-209ENST00000551424 HCLS1P14317 486 aaPredicted RBP29.89■■■□□ 2.38
CNTN1-209ENST00000551424 SLC10A5Q5PT55 438 aa29.89■■■□□ 2.38
CNTN1-209ENST00000551424 NLRP10Q86W26 655 aa29.89■■■□□ 2.38
CNTN1-209ENST00000551424 ZNF428Q96B54 188 aa29.89■■■□□ 2.38
CNTN1-209ENST00000551424 ATP6V0A2Q9Y487 856 aa29.88■■■□□ 2.37
CNTN1-209ENST00000551424 AOC3Q16853 763 aa29.87■■■□□ 2.37
CNTN1-209ENST00000551424 RUNDC1Q96C34 613 aa29.87■■■□□ 2.37
CNTN1-209ENST00000551424 DDX21Q9NR30 783 aaKnown RBP eCLIP29.87■■■□□ 2.37
CNTN1-209ENST00000551424 CHL1O00533 1208 aa29.86■■■□□ 2.37
CNTN1-209ENST00000551424 CHPF2Q9P2E5 772 aa29.86■■■□□ 2.37
CNTN1-209ENST00000551424 TRMT112Q9UI30 125 aaKnown RBP29.86■■■□□ 2.37
CNTN1-209ENST00000551424 EPS15P42566 896 aa29.85■■■□□ 2.37
CNTN1-209ENST00000551424 VEGFBP49765 207 aa29.85■■■□□ 2.37
CNTN1-209ENST00000551424 SCNN1DP51172 638 aa29.85■■■□□ 2.37
CNTN1-209ENST00000551424 TCIRG1Q13488 830 aa29.85■■■□□ 2.37
CNTN1-209ENST00000551424 TRIM35Q9UPQ4 493 aa29.85■■■□□ 2.37
CNTN1-209ENST00000551424 SH3TC1Q8TE82 1336 aa29.83■■■□□ 2.37
CNTN1-209ENST00000551424 HDGFL1Q5TGJ6 251 aa29.83■■■□□ 2.37
CNTN1-209ENST00000551424 FOXN1O15353 648 aa29.82■■■□□ 2.36
CNTN1-209ENST00000551424 DPP8Q6V1X1 898 aaPredicted RBP29.82■■■□□ 2.36
CNTN1-209ENST00000551424 DDX46Q7L014 1031 aaKnown RBP29.82■■■□□ 2.36
CNTN1-209ENST00000551424 SUPT20HQ8NEM7 779 aa29.82■■■□□ 2.36
CNTN1-209ENST00000551424 TAF1P21675 1872 aa29.81■■■□□ 2.36
CNTN1-209ENST00000551424 ABT1Q9ULW3 272 aaKnown RBP29.81■■■□□ 2.36
CNTN1-209ENST00000551424 ADAMTS8Q9UP79 889 aa29.81■■■□□ 2.36
CNTN1-209ENST00000551424 BBOX1O75936 387 aa29.8■■■□□ 2.36
CNTN1-209ENST00000551424 MPNDQ8N594 471 aa29.8■■■□□ 2.36
CNTN1-209ENST00000551424 AIDAQ96BJ3 306 aa29.8■■■□□ 2.36
CNTN1-209ENST00000551424 FMR1Q06787 632 aaKnown RBP eCLIP29.79■■■□□ 2.36
CNTN1-209ENST00000551424 SP8Q8IXZ3 490 aa29.79■■■□□ 2.36
CNTN1-209ENST00000551424 GRAPQ13588 217 aa29.78■■■□□ 2.36
CNTN1-209ENST00000551424 DEFB115Q30KQ5 88 aa29.78■■■□□ 2.36
CNTN1-209ENST00000551424 GRAPLQ8TC17 118 aaPredicted RBP29.78■■■□□ 2.36
CNTN1-209ENST00000551424 ZNRF3Q9ULT6 936 aa29.78■■■□□ 2.36
CNTN1-209ENST00000551424 CXCL9Q07325 125 aa29.77■■■□□ 2.36
CNTN1-209ENST00000551424 USP50Q70EL3 339 aaPredicted RBP29.77■■■□□ 2.36
CNTN1-209ENST00000551424 PLBD2Q8NHP8 589 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms