RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 MAP1SQ66K74 1059 aaPredicted RBP19.58■□□□□ 0.73
TMEM106C-216ENST00000551305 RPGRQ92834 1020 aaKnown RBP19.58■□□□□ 0.73
TMEM106C-216ENST00000551305 PSMD1Q99460 953 aa19.58■□□□□ 0.73
TMEM106C-216ENST00000551305 NUP98P52948 1817 aa19.58■□□□□ 0.72
TMEM106C-216ENST00000551305 FOXN1O15353 648 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 VEGFBP49765 207 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 C3orf67Q6ZVT6 689 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 ZNF34Q8IZ26 560 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 JDP2Q8WYK2 163 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 COL4A5P29400 1685 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 HOXA10P31260 410 aaPredicted RBP19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 CNTROBQ8N137 903 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 GPC2Q8N158 579 aa19.57■□□□□ 0.72
TMEM106C-216ENST00000551305 NTSR2O95665 410 aa19.56■□□□□ 0.72
TMEM106C-216ENST00000551305 PNMA8AQ86V59 439 aaPredicted RBP19.56■□□□□ 0.72
TMEM106C-216ENST00000551305 EIF2S2P20042 333 aaKnown RBP19.55■□□□□ 0.72
TMEM106C-216ENST00000551305 EIF6P56537 245 aaKnown RBP19.55■□□□□ 0.72
TMEM106C-216ENST00000551305 CC2D2BQ6DHV5 1058 aa19.55■□□□□ 0.72
TMEM106C-216ENST00000551305 GIGYF2Q6Y7W6 1299 aaKnown RBP19.55■□□□□ 0.72
TMEM106C-216ENST00000551305 RBM17Q96I25 401 aaKnown RBP19.55■□□□□ 0.72
TMEM106C-216ENST00000551305 ADAMTSL1Q8N6G6 1762 aa19.54■□□□□ 0.72
TMEM106C-216ENST00000551305 MAPK8IP3Q9UPT6 1336 aa19.54■□□□□ 0.72
TMEM106C-216ENST00000551305 ANXA1P04083 346 aa19.54■□□□□ 0.72
TMEM106C-216ENST00000551305 LARGE2Q8N3Y3 721 aa19.54■□□□□ 0.72
TMEM106C-216ENST00000551305 TSPYL4Q9UJ04 414 aa19.54■□□□□ 0.72
TMEM106C-216ENST00000551305 PPEF1O14829 653 aaPredicted RBP19.53■□□□□ 0.72
TMEM106C-216ENST00000551305 PDIA6Q15084 440 aa19.53■□□□□ 0.72
TMEM106C-216ENST00000551305 PROSER3Q2NL68 480 aa19.53■□□□□ 0.72
TMEM106C-216ENST00000551305 LRP10Q7Z4F1 713 aa19.53■□□□□ 0.72
TMEM106C-216ENST00000551305 CRAMP1Q96RY5 1269 aa19.53■□□□□ 0.72
TMEM106C-216ENST00000551305 EPS15P42566 896 aa19.52■□□□□ 0.72
TMEM106C-216ENST00000551305 FMR1Q06787 632 aaKnown RBP eCLIP19.52■□□□□ 0.72
TMEM106C-216ENST00000551305 PPP1R42Q7Z4L9 355 aa19.52■□□□□ 0.72
TMEM106C-216ENST00000551305 IBTKQ9P2D0 1353 aaPredicted RBP19.52■□□□□ 0.72
TMEM106C-216ENST00000551305 SCNN1DP51172 638 aa19.51■□□□□ 0.71
TMEM106C-216ENST00000551305 RIPK4P57078 832 aa19.51■□□□□ 0.71
TMEM106C-216ENST00000551305 DEFB115Q30KQ5 88 aa19.51■□□□□ 0.71
TMEM106C-216ENST00000551305 PNNQ9H307 717 aaKnown RBP19.51■□□□□ 0.71
TMEM106C-216ENST00000551305 LTBP1Q14766 1721 aa19.51■□□□□ 0.71
TMEM106C-216ENST00000551305 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
TMEM106C-216ENST00000551305 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
TMEM106C-216ENST00000551305 LMOD1P29536 600 aaPredicted RBP19.5■□□□□ 0.71
TMEM106C-216ENST00000551305 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
TMEM106C-216ENST00000551305 AIDAQ96BJ3 306 aa19.5■□□□□ 0.71
TMEM106C-216ENST00000551305 NLRP3Q96P20 1036 aa19.5■□□□□ 0.71
TMEM106C-216ENST00000551305 UTP14AQ9BVJ6 771 aaKnown RBP19.5■□□□□ 0.71
TMEM106C-216ENST00000551305 RASSF10A6NK89 507 aa19.49■□□□□ 0.71
TMEM106C-216ENST00000551305 PARP10Q53GL7 1025 aa19.49■□□□□ 0.71
TMEM106C-216ENST00000551305 WBP1LQ9NX94 342 aa19.49■□□□□ 0.71
TMEM106C-216ENST00000551305 ABT1Q9ULW3 272 aaKnown RBP19.49■□□□□ 0.71
TMEM106C-216ENST00000551305 PPIP5K2O43314 1243 aa19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 CTCFP49711 727 aaPredicted RBP19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 AOC3Q16853 763 aa19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 SLC10A5Q5PT55 438 aa19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 NIM1KQ8IY84 436 aa19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 PRDM10Q9NQV6 1147 aa19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
TMEM106C-216ENST00000551305 LBX1P52954 281 aa19.47■□□□□ 0.71
TMEM106C-216ENST00000551305 AIMP1Q12904 312 aaKnown RBP19.47■□□□□ 0.71
TMEM106C-216ENST00000551305 ATP6V0A2Q9Y487 856 aa19.47■□□□□ 0.71
TMEM106C-216ENST00000551305 ABCC4O15439 1325 aa19.47■□□□□ 0.71
TMEM106C-216ENST00000551305 WDR33Q9C0J8 1336 aaKnown RBP19.47■□□□□ 0.71
TMEM106C-216ENST00000551305 COPS6Q7L5N1 327 aa19.46■□□□□ 0.71
TMEM106C-216ENST00000551305 ZNF428Q96B54 188 aa19.46■□□□□ 0.71
TMEM106C-216ENST00000551305 TRAF5O00463 557 aa19.45■□□□□ 0.7
TMEM106C-216ENST00000551305 HCLS1P14317 486 aaPredicted RBP19.45■□□□□ 0.7
TMEM106C-216ENST00000551305 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
TMEM106C-216ENST00000551305 XAGE3Q8WTP9 111 aa19.45■□□□□ 0.7
TMEM106C-216ENST00000551305 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
TMEM106C-216ENST00000551305 TMX4Q9H1E5 349 aaPredicted RBP19.44■□□□□ 0.7
TMEM106C-216ENST00000551305 CXCL9Q07325 125 aa19.44■□□□□ 0.7
TMEM106C-216ENST00000551305 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
TMEM106C-216ENST00000551305 CST9Q5W186 159 aa19.44■□□□□ 0.7
TMEM106C-216ENST00000551305 USP50Q70EL3 339 aaPredicted RBP19.44■□□□□ 0.7
TMEM106C-216ENST00000551305 NLRP10Q86W26 655 aa19.44■□□□□ 0.7
TMEM106C-216ENST00000551305 CCDC146Q8IYE0 955 aa19.43■□□□□ 0.7
TMEM106C-216ENST00000551305 BABAM1Q9NWV8 329 aa19.43■□□□□ 0.7
TMEM106C-216ENST00000551305 GPRC5DQ9NZD1 345 aa19.43■□□□□ 0.7
TMEM106C-216ENST00000551305 ZNRF3Q9ULT6 936 aa19.43■□□□□ 0.7
TMEM106C-216ENST00000551305 BBOX1O75936 387 aa19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 HSPA8P11142 646 aaKnown RBP19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 GRM1Q13255 1194 aa19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 TCIRG1Q13488 830 aa19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 DPP8Q6V1X1 898 aaPredicted RBP19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 PAXIP1Q6ZW49 1069 aaPredicted RBP19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 SP8Q8IXZ3 490 aa19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 RTFDC1Q9BY42 306 aaPredicted RBP19.42■□□□□ 0.7
TMEM106C-216ENST00000551305 HSP90AB3PQ58FF7 597 aa19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 CYP4F22Q6NT55 531 aa19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 MPNDQ8N594 471 aa19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 SUPT20HQ8NEM7 779 aa19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 VPS33BQ9H267 617 aa19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 ADARB2Q9NS39 739 aaKnown RBP19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
TMEM106C-216ENST00000551305 GMPSP49915 693 aaPredicted RBP19.4■□□□□ 0.7
TMEM106C-216ENST00000551305 MAP2K1Q02750 393 aaPredicted RBP19.4■□□□□ 0.7
TMEM106C-216ENST00000551305 LMOD3Q0VAK6 560 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms