RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 BABAM1Q9NWV8 329 aa28.55■■■□□ 2.16
SMARCC2-210ENST00000550519 RPGRQ92834 1020 aaKnown RBP28.54■■■□□ 2.16
SMARCC2-210ENST00000550519 SCN4AP35499 1836 aa28.54■■■□□ 2.16
SMARCC2-210ENST00000550519 TMPOP42166 694 aaKnown RBP28.53■■■□□ 2.16
SMARCC2-210ENST00000550519 HACL1Q9UJ83 578 aa28.53■■■□□ 2.16
SMARCC2-210ENST00000550519 PASKQ96RG2 1323 aa28.52■■■□□ 2.16
SMARCC2-210ENST00000550519 CRAMP1Q96RY5 1269 aa28.52■■■□□ 2.16
SMARCC2-210ENST00000550519 HSPA1AP0DMV8 641 aaKnown RBP28.51■■■□□ 2.15
SMARCC2-210ENST00000550519 HSPA1BP0DMV9 641 aaKnown RBP28.51■■■□□ 2.15
SMARCC2-210ENST00000550519 EIF2S2P20042 333 aaKnown RBP28.51■■■□□ 2.15
SMARCC2-210ENST00000550519 PARP10Q53GL7 1025 aa28.51■■■□□ 2.15
SMARCC2-210ENST00000550519 PPP1R42Q7Z4L9 355 aa28.51■■■□□ 2.15
SMARCC2-210ENST00000550519 LMOD3Q0VAK6 560 aa28.5■■■□□ 2.15
SMARCC2-210ENST00000550519 GRIPAP1Q4V328 841 aa28.5■■■□□ 2.15
SMARCC2-210ENST00000550519 GPC2Q8N158 579 aa28.5■■■□□ 2.15
SMARCC2-210ENST00000550519 JDP2Q8WYK2 163 aa28.5■■■□□ 2.15
SMARCC2-210ENST00000550519 RBM17Q96I25 401 aaKnown RBP28.5■■■□□ 2.15
SMARCC2-210ENST00000550519 ITGBL1O95965 494 aaPredicted RBP28.49■■■□□ 2.15
SMARCC2-210ENST00000550519 EPHX2P34913 555 aa28.49■■■□□ 2.15
SMARCC2-210ENST00000550519 PROSER3Q2NL68 480 aa28.49■■■□□ 2.15
SMARCC2-210ENST00000550519 C3orf67Q6ZVT6 689 aa28.49■■■□□ 2.15
SMARCC2-210ENST00000550519 EAPPQ56P03 285 aaPredicted RBP28.48■■■□□ 2.15
SMARCC2-210ENST00000550519 RNF123Q5XPI4 1314 aa28.47■■■□□ 2.15
SMARCC2-210ENST00000550519 ANXA1P04083 346 aa28.47■■■□□ 2.15
SMARCC2-210ENST00000550519 SLC10A5Q5PT55 438 aa28.47■■■□□ 2.15
SMARCC2-210ENST00000550519 MKRN1Q9UHC7 482 aaKnown RBP28.47■■■□□ 2.15
SMARCC2-210ENST00000550519 PPEF1O14829 653 aaPredicted RBP28.46■■■□□ 2.15
SMARCC2-210ENST00000550519 PNMA8AQ86V59 439 aaPredicted RBP28.46■■■□□ 2.15
SMARCC2-210ENST00000550519 NLRP3Q96P20 1036 aa28.46■■■□□ 2.15
SMARCC2-210ENST00000550519 UTP14AQ9BVJ6 771 aaKnown RBP28.46■■■□□ 2.15
SMARCC2-210ENST00000550519 COL4A5P29400 1685 aa28.45■■■□□ 2.15
SMARCC2-210ENST00000550519 SLC51AQ86UW1 340 aa28.45■■■□□ 2.14
SMARCC2-210ENST00000550519 EIF6P56537 245 aaKnown RBP28.44■■■□□ 2.14
SMARCC2-210ENST00000550519 CLEC11AQ9Y240 323 aa28.44■■■□□ 2.14
SMARCC2-210ENST00000550519 ADAMTSL1Q8N6G6 1762 aa28.44■■■□□ 2.14
SMARCC2-210ENST00000550519 MYBBP1AQ9BQG0 1328 aaKnown RBP28.43■■■□□ 2.14
SMARCC2-210ENST00000550519 CNTNAP1P78357 1384 aa28.43■■■□□ 2.14
SMARCC2-210ENST00000550519 COPS6Q7L5N1 327 aa28.43■■■□□ 2.14
SMARCC2-210ENST00000550519 CHL1O00533 1208 aa28.42■■■□□ 2.14
SMARCC2-210ENST00000550519 TCERG1O14776 1098 aaKnown RBP28.42■■■□□ 2.14
SMARCC2-210ENST00000550519 DDX10Q13206 875 aaKnown RBP28.42■■■□□ 2.14
SMARCC2-210ENST00000550519 LARGE2Q8N3Y3 721 aa28.42■■■□□ 2.14
SMARCC2-210ENST00000550519 TMEM88BA6NKF7 163 aa28.41■■■□□ 2.14
SMARCC2-210ENST00000550519 HSP90AB3PQ58FF7 597 aa28.41■■■□□ 2.14
SMARCC2-210ENST00000550519 CCDC146Q8IYE0 955 aa28.41■■■□□ 2.14
SMARCC2-210ENST00000550519 TNS4Q8IZW8 715 aa28.41■■■□□ 2.14
SMARCC2-210ENST00000550519 XAGE3Q8WTP9 111 aa28.41■■■□□ 2.14
SMARCC2-210ENST00000550519 NECTIN2Q92692 538 aa28.41■■■□□ 2.14
SMARCC2-210ENST00000550519 NEUROD2Q15784 382 aa28.4■■■□□ 2.14
SMARCC2-210ENST00000550519 CNTROBQ8N137 903 aa28.4■■■□□ 2.14
SMARCC2-210ENST00000550519 DDX21Q9NR30 783 aaKnown RBP eCLIP28.4■■■□□ 2.14
SMARCC2-210ENST00000550519 ATP6V0A2Q9Y487 856 aa28.4■■■□□ 2.14
SMARCC2-210ENST00000550519 GJA3Q9Y6H8 435 aa28.4■■■□□ 2.14
SMARCC2-210ENST00000550519 AIMP1Q12904 312 aaKnown RBP28.39■■■□□ 2.14
SMARCC2-210ENST00000550519 KRT24Q2M2I5 525 aa28.39■■■□□ 2.14
SMARCC2-210ENST00000550519 MAP1SQ66K74 1059 aaPredicted RBP28.39■■■□□ 2.14
SMARCC2-210ENST00000550519 NLRP10Q86W26 655 aa28.39■■■□□ 2.14
SMARCC2-210ENST00000550519 TRIM35Q9UPQ4 493 aa28.39■■■□□ 2.14
SMARCC2-210ENST00000550519 TCIRG1Q13488 830 aa28.38■■■□□ 2.13
SMARCC2-210ENST00000550519 RUNDC1Q96C34 613 aa28.38■■■□□ 2.13
SMARCC2-210ENST00000550519 ABCC4O15439 1325 aa28.38■■■□□ 2.13
SMARCC2-210ENST00000550519 SCNN1DP51172 638 aa28.37■■■□□ 2.13
SMARCC2-210ENST00000550519 TMX4Q9H1E5 349 aaPredicted RBP28.37■■■□□ 2.13
SMARCC2-210ENST00000550519 VPS33BQ9H267 617 aa28.37■■■□□ 2.13
SMARCC2-210ENST00000550519 NIM1KQ8IY84 436 aa28.36■■■□□ 2.13
SMARCC2-210ENST00000550519 PPIP5K2O43314 1243 aa28.35■■■□□ 2.13
SMARCC2-210ENST00000550519 BBOX1O75936 387 aa28.35■■■□□ 2.13
SMARCC2-210ENST00000550519 HCLS1P14317 486 aaPredicted RBP28.35■■■□□ 2.13
SMARCC2-210ENST00000550519 LMOD1P29536 600 aaPredicted RBP28.35■■■□□ 2.13
SMARCC2-210ENST00000550519 VEGFBP49765 207 aa28.35■■■□□ 2.13
SMARCC2-210ENST00000550519 RTFDC1Q9BY42 306 aaPredicted RBP28.35■■■□□ 2.13
SMARCC2-210ENST00000550519 EPS15P42566 896 aa28.34■■■□□ 2.13
SMARCC2-210ENST00000550519 TRMT112Q9UI30 125 aaKnown RBP28.34■■■□□ 2.13
SMARCC2-210ENST00000550519 LTBP1Q14766 1721 aa28.34■■■□□ 2.13
SMARCC2-210ENST00000550519 WDR43Q15061 677 aaKnown RBP eCLIP28.33■■■□□ 2.13
SMARCC2-210ENST00000550519 AOC3Q16853 763 aa28.33■■■□□ 2.13
SMARCC2-210ENST00000550519 SP8Q8IXZ3 490 aa28.33■■■□□ 2.13
SMARCC2-210ENST00000550519 CHPF2Q9P2E5 772 aa28.33■■■□□ 2.13
SMARCC2-210ENST00000550519 ADAMTS8Q9UP79 889 aa28.33■■■□□ 2.13
SMARCC2-210ENST00000550519 LAS1LQ9Y4W2 734 aaKnown RBP28.33■■■□□ 2.13
SMARCC2-210ENST00000550519 SH3TC1Q8TE82 1336 aa28.33■■■□□ 2.13
SMARCC2-210ENST00000550519 HOXB7P09629 217 aa28.32■■■□□ 2.12
SMARCC2-210ENST00000550519 SUPT20HQ8NEM7 779 aa28.32■■■□□ 2.12
SMARCC2-210ENST00000550519 RASSF10A6NK89 507 aa28.31■■■□□ 2.12
SMARCC2-210ENST00000550519 ANKRD36CQ5JPF3 1778 aa28.3■■■□□ 2.12
SMARCC2-210ENST00000550519 HDGFL1Q5TGJ6 251 aa28.3■■■□□ 2.12
SMARCC2-210ENST00000550519 USP50Q70EL3 339 aaPredicted RBP28.3■■■□□ 2.12
SMARCC2-210ENST00000550519 FOXN1O15353 648 aa28.29■■■□□ 2.12
SMARCC2-210ENST00000550519 DPP8Q6V1X1 898 aaPredicted RBP28.29■■■□□ 2.12
SMARCC2-210ENST00000550519 DDX46Q7L014 1031 aaKnown RBP28.29■■■□□ 2.12
SMARCC2-210ENST00000550519 MPNDQ8N594 471 aa28.29■■■□□ 2.12
SMARCC2-210ENST00000550519 PLBD2Q8NHP8 589 aa28.29■■■□□ 2.12
SMARCC2-210ENST00000550519 ZNRF3Q9ULT6 936 aa28.29■■■□□ 2.12
SMARCC2-210ENST00000550519 CXCL9Q07325 125 aa28.28■■■□□ 2.12
SMARCC2-210ENST00000550519 GRAPQ13588 217 aa28.28■■■□□ 2.12
SMARCC2-210ENST00000550519 DEFB115Q30KQ5 88 aa28.28■■■□□ 2.12
SMARCC2-210ENST00000550519 ANKRD13DQ6ZTN6 518 aa28.28■■■□□ 2.12
SMARCC2-210ENST00000550519 GRAPLQ8TC17 118 aaPredicted RBP28.28■■■□□ 2.12
SMARCC2-210ENST00000550519 CFAP44Q96MT7 982 aa28.28■■■□□ 2.12
SMARCC2-210ENST00000550519 DBF4Q9UBU7 674 aaPredicted RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms