RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 KCNA6P17658 529 aa8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 SCTRP47872 440 aa8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 RNF144AP50876 292 aaPredicted RBP8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 PIP4K2BP78356 416 aa8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 PNMA1Q8ND90 353 aa8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 STK26Q9P289 416 aa8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 TBX22Q9Y458 520 aa8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 KIAA1210Q9ULL0 1709 aa8.46□□□□□ -1.06
EFCAB2-215ENST00000549220 ASXL1Q8IXJ9 1541 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 TRPM1Q7Z4N2 1603 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 TRAK2O60296 914 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 NR1H3Q13133 447 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 TMEM132EQ6IEE7 984 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 CNTNAP3BQ96NU0 1288 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 CNTNAP3Q9BZ76 1288 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 AMOTL2Q9Y2J4 779 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 ROBO1Q9Y6N7 1651 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 TMEM94Q12767 1356 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 PIK3C2GO75747 1445 aa8.45□□□□□ -1.06
EFCAB2-215ENST00000549220 SLURP2P0DP57 97 aa8.44□□□□□ -1.06
EFCAB2-215ENST00000549220 CFAP70Q5T0N1 1121 aa8.44□□□□□ -1.06
EFCAB2-215ENST00000549220 VWA5B2Q8N398 1253 aa8.44□□□□□ -1.06
EFCAB2-215ENST00000549220 WHAMMQ8TF30 809 aa8.44□□□□□ -1.06
EFCAB2-215ENST00000549220 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
EFCAB2-215ENST00000549220 PCDHB9Q9Y5E1 797 aa8.44□□□□□ -1.06
EFCAB2-215ENST00000549220 IQSEC2Q5JU85 1478 aa8.44□□□□□ -1.06
EFCAB2-215ENST00000549220 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
EFCAB2-215ENST00000549220 PHLPP1O60346 1717 aa8.43□□□□□ -1.06
EFCAB2-215ENST00000549220 GAS6Q14393 721 aa8.43□□□□□ -1.06
EFCAB2-215ENST00000549220 ZNF385CQ66K41 422 aaPredicted RBP8.43□□□□□ -1.06
EFCAB2-215ENST00000549220 CCER1Q8TC90 406 aaPredicted RBP8.43□□□□□ -1.06
EFCAB2-215ENST00000549220 FBXO41Q8TF61 875 aa8.43□□□□□ -1.06
EFCAB2-215ENST00000549220 OSBPL3Q9H4L5 887 aa8.43□□□□□ -1.06
EFCAB2-215ENST00000549220 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
EFCAB2-215ENST00000549220 ARHGEF15O94989 841 aa8.42□□□□□ -1.06
EFCAB2-215ENST00000549220 MSH6P52701 1360 aa8.42□□□□□ -1.06
EFCAB2-215ENST00000549220 TONSLQ96HA7 1378 aa8.42□□□□□ -1.06
EFCAB2-215ENST00000549220 PIK3R4Q99570 1358 aa8.42□□□□□ -1.06
EFCAB2-215ENST00000549220 NRXN1Q9ULB1 1477 aa8.42□□□□□ -1.06
EFCAB2-215ENST00000549220 FMN2Q9NZ56 1722 aa8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 A0A1W2PRU2 124 aa8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 IRF5Q13568 498 aa8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 SAFB2Q14151 953 aaKnown RBP eCLIP8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 PHTF2Q8N3S3 785 aa8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 HRH3Q9Y5N1 445 aa8.41□□□□□ -1.06
EFCAB2-215ENST00000549220 YTHDC2Q9H6S0 1430 aaKnown RBP8.4□□□□□ -1.06
EFCAB2-215ENST00000549220 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.06
EFCAB2-215ENST00000549220 TOM1O60784 492 aa8.4□□□□□ -1.06
EFCAB2-215ENST00000549220 KCNMA1Q12791 1236 aa8.4□□□□□ -1.06
EFCAB2-215ENST00000549220 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
EFCAB2-215ENST00000549220 LYSMD3Q7Z3D4 306 aa8.4□□□□□ -1.06
EFCAB2-215ENST00000549220 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 GPC1P35052 558 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 TSGA10IPQ3SY00 556 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 WAPLQ7Z5K2 1190 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 CCDC85AQ96PX6 553 aaPredicted RBP8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 TRAK1Q9UPV9 953 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 NDUFB9Q9Y6M9 179 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 ITSN1Q15811 1721 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 ADGRB1O14514 1584 aa8.39□□□□□ -1.07
EFCAB2-215ENST00000549220 PRAG1Q86YV5 1406 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 PLEKHH1Q9ULM0 1364 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 THBS1P07996 1170 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 RHOQP17081 205 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 ATF3P18847 181 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 MCCD1P59942 119 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 SV2AQ7L0J3 742 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 PRICKLE2Q7Z3G6 844 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 POGKQ9P215 609 aa8.38□□□□□ -1.07
EFCAB2-215ENST00000549220 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 ADGRL3Q9HAR2 1447 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 LRPPRCP42704 1394 aaKnown RBP8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 CLN3Q13286 438 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 DBN1Q16643 649 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 NBPF1Q3BBV0 1214 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 CEP126Q9P2H0 1117 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 ADAMTS8Q9UP79 889 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 TBC1D2BQ9UPU7 963 aa8.37□□□□□ -1.07
EFCAB2-215ENST00000549220 NHSL1Q5SYE7 1610 aa8.36□□□□□ -1.07
EFCAB2-215ENST00000549220 CDC42BPGQ6DT37 1551 aa8.36□□□□□ -1.07
EFCAB2-215ENST00000549220 SPATA31C2B4DYI2 1134 aa8.36□□□□□ -1.07
EFCAB2-215ENST00000549220 ZNF837Q96EG3 531 aaPredicted RBP8.36□□□□□ -1.07
EFCAB2-215ENST00000549220 PRAM1Q96QH2 718 aa8.36□□□□□ -1.07
EFCAB2-215ENST00000549220 HIRIP3Q9BW71 556 aaPredicted RBP8.36□□□□□ -1.07
EFCAB2-215ENST00000549220 DLC1Q96QB1 1528 aa8.35□□□□□ -1.07
EFCAB2-215ENST00000549220 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
EFCAB2-215ENST00000549220 C19orf44Q9H6X5 657 aa8.35□□□□□ -1.07
EFCAB2-215ENST00000549220 USP32Q8NFA0 1604 aa8.35□□□□□ -1.07
EFCAB2-215ENST00000549220 TECPR2O15040 1411 aa8.35□□□□□ -1.07
EFCAB2-215ENST00000549220 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
EFCAB2-215ENST00000549220 CDC14CA4D256 554 aa8.34□□□□□ -1.07
EFCAB2-215ENST00000549220 IL2RAP01589 272 aa8.34□□□□□ -1.07
EFCAB2-215ENST00000549220 HSPA1LP34931 641 aa8.34□□□□□ -1.07
EFCAB2-215ENST00000549220 NBPF8Q3BBV2 869 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms