RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 C1QTNF9BB2RNN3 333 aa7.79□□□□□ -1.16
DEPDC4-205ENST00000548313 UBAP2LQ14157 1087 aaKnown RBP7.79□□□□□ -1.16
DEPDC4-205ENST00000548313 RHPN1Q8TCX5 695 aa7.79□□□□□ -1.16
DEPDC4-205ENST00000548313 NGLY1Q96IV0 654 aa7.79□□□□□ -1.16
DEPDC4-205ENST00000548313 SUV39H2Q9H5I1 410 aa7.79□□□□□ -1.16
DEPDC4-205ENST00000548313 NEUROD4Q9HD90 331 aa7.79□□□□□ -1.16
DEPDC4-205ENST00000548313 GGA1Q9UJY5 639 aa7.79□□□□□ -1.16
DEPDC4-205ENST00000548313 HOXB4P17483 251 aaPredicted RBP7.78□□□□□ -1.16
DEPDC4-205ENST00000548313 C16orf46Q6P387 395 aa7.78□□□□□ -1.16
DEPDC4-205ENST00000548313 FIGNL1Q6PIW4 674 aa7.78□□□□□ -1.16
DEPDC4-205ENST00000548313 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
DEPDC4-205ENST00000548313 RUBCNLQ9H714 662 aa7.78□□□□□ -1.16
DEPDC4-205ENST00000548313 QTRT2Q9H974 415 aaKnown RBP7.78□□□□□ -1.16
DEPDC4-205ENST00000548313 PATL2C9JE40 543 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-205ENST00000548313 FGFR3P22607 806 aa7.77□□□□□ -1.17
DEPDC4-205ENST00000548313 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
DEPDC4-205ENST00000548313 CD163Q86VB7 1156 aa7.77□□□□□ -1.17
DEPDC4-205ENST00000548313 MKNK1Q9BUB5 465 aa7.77□□□□□ -1.17
DEPDC4-205ENST00000548313 GJA3Q9Y6H8 435 aa7.77□□□□□ -1.17
DEPDC4-205ENST00000548313 ARAFP10398 606 aa7.76□□□□□ -1.17
DEPDC4-205ENST00000548313 EPXP11678 715 aa7.76□□□□□ -1.17
DEPDC4-205ENST00000548313 COX20Q5RI15 118 aa7.76□□□□□ -1.17
DEPDC4-205ENST00000548313 SAMD5Q5TGI4 173 aa7.76□□□□□ -1.17
DEPDC4-205ENST00000548313 ABHD17AQ96GS6 310 aa7.76□□□□□ -1.17
DEPDC4-205ENST00000548313 C2CD2LO14523 706 aa7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 BNIP3LO60238 219 aa7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 KCNA1Q09470 495 aa7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 NAA30Q147X3 362 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 CAPN12Q6ZSI9 719 aa7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 CCER1Q8TC90 406 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 SUSD3Q96L08 255 aa7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 NDFIP2Q9NV92 336 aa7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
DEPDC4-205ENST00000548313 BRD2P25440 801 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 DGKGP49619 791 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 CTBSQ01459 385 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 DGKZQ13574 1117 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 IER5Q5VY09 327 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 LRRC69Q6ZNQ3 347 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 TXNDC2Q86VQ3 553 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 ZCCHC2Q9C0B9 1178 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 SAP130Q9H0E3 1048 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 LRFN2Q9ULH4 789 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 GNEQ9Y223 722 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
DEPDC4-205ENST00000548313 TGFBR3LH3BV60 316 aa7.73□□□□□ -1.17
DEPDC4-205ENST00000548313 HELQQ8TDG4 1101 aa7.73□□□□□ -1.17
DEPDC4-205ENST00000548313 GTF3C2Q8WUA4 911 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-205ENST00000548313 EGFL7Q9UHF1 273 aa7.73□□□□□ -1.17
DEPDC4-205ENST00000548313 ATXN7O15265 892 aaPredicted RBP7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 FAM157BP0CG42 384 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 SCNN1AP37088 669 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 CHRNA4P43681 627 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 ZNF280CQ8ND82 737 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 IFT43Q96FT9 208 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 SEMA6BQ9H3T3 888 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 KLK14Q9P0G3 267 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 STIM2Q9P246 746 aa7.72□□□□□ -1.17
DEPDC4-205ENST00000548313 NEURL1BA8MQ27 555 aa7.71□□□□□ -1.18
DEPDC4-205ENST00000548313 LAMC2Q13753 1193 aa7.71□□□□□ -1.18
DEPDC4-205ENST00000548313 HSH2DQ96JZ2 352 aa7.71□□□□□ -1.18
DEPDC4-205ENST00000548313 DMGDHQ9UI17 866 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-205ENST00000548313 BCS1LQ9Y276 419 aa7.71□□□□□ -1.18
DEPDC4-205ENST00000548313 TNFRSF10BO14763 440 aa7.7□□□□□ -1.18
DEPDC4-205ENST00000548313 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
DEPDC4-205ENST00000548313 TNP2Q05952 138 aa7.7□□□□□ -1.18
DEPDC4-205ENST00000548313 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
DEPDC4-205ENST00000548313 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
DEPDC4-205ENST00000548313 KRTAP9-2Q9BYQ4 174 aa7.7□□□□□ -1.18
DEPDC4-205ENST00000548313 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 EFSO43281 561 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 MICAL2O94851 1124 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 NPR3P17342 541 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 ADH6P28332 368 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 GATA4P43694 442 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 DOC2BQ14184 412 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 ZMYM1Q5SVZ6 1142 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 CHSY3Q70JA7 882 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 AVENQ9NQS1 362 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-205ENST00000548313 ICMTO60725 284 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 FAM13AO94988 1023 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 ABL1P00519 1130 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 ITGB7P26010 798 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 KCNQ4P56696 695 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 ALKBH2Q6NS38 261 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 C11orf16Q9NQ32 467 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 FAM13BQ9NYF5 915 aa7.68□□□□□ -1.18
DEPDC4-205ENST00000548313 KHNYNO15037 678 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 EPB42P16452 691 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 INPP5BP32019 993 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 SERPINB4P48594 390 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 TYRO3Q06418 890 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 FAM182BQ5T319 152 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 TREML1Q86YW5 311 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 AEBP1Q8IUX7 1158 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 ETFBKMTQ8IXQ9 262 aa7.67□□□□□ -1.18
DEPDC4-205ENST00000548313 BRD7Q9NPI1 651 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms