RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 RBM17Q96I25 401 aaKnown RBP15.1■□□□□ 0.01
RAB5C-203ENST00000546881 GJA3Q9Y6H8 435 aa15.1■□□□□ 0.01
RAB5C-203ENST00000546881 FZD9O00144 591 aa15.09■□□□□ 0.01
RAB5C-203ENST00000546881 EIF6P56537 245 aaKnown RBP15.09■□□□□ 0.01
RAB5C-203ENST00000546881 RIPK4P57078 832 aa15.09■□□□□ 0.01
RAB5C-203ENST00000546881 PSMD1Q99460 953 aa15.09■□□□□ 0.01
RAB5C-203ENST00000546881 PASKQ96RG2 1323 aa15.09■□□□□ 0.01
RAB5C-203ENST00000546881 PPEF1O14829 653 aaPredicted RBP15.08■□□□□ 0
RAB5C-203ENST00000546881 CC2D2BQ6DHV5 1058 aa15.08■□□□□ 0
RAB5C-203ENST00000546881 GIGYF2Q6Y7W6 1299 aaKnown RBP15.08■□□□□ 0
RAB5C-203ENST00000546881 PPP1R42Q7Z4L9 355 aa15.08■□□□□ 0
RAB5C-203ENST00000546881 SLC51AQ86UW1 340 aa15.08■□□□□ 0
RAB5C-203ENST00000546881 ZNF34Q8IZ26 560 aa15.08■□□□□ 0
RAB5C-203ENST00000546881 GPC2Q8N158 579 aa15.08■□□□□ 0
RAB5C-203ENST00000546881 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0
RAB5C-203ENST00000546881 NECTIN2Q92692 538 aa15.08■□□□□ 0
RAB5C-203ENST00000546881 IBTKQ9P2D0 1353 aaPredicted RBP15.08■□□□□ 0
RAB5C-203ENST00000546881 TMEM88BA6NKF7 163 aa15.07■□□□□ 0
RAB5C-203ENST00000546881 NTSR2O95665 410 aa15.07■□□□□ 0
RAB5C-203ENST00000546881 ANXA1P04083 346 aa15.07■□□□□ 0
RAB5C-203ENST00000546881 HOXA10P31260 410 aaPredicted RBP15.07■□□□□ 0
RAB5C-203ENST00000546881 MAP1SQ66K74 1059 aaPredicted RBP15.07■□□□□ 0
RAB5C-203ENST00000546881 C3orf67Q6ZVT6 689 aa15.07■□□□□ 0
RAB5C-203ENST00000546881 PNMA8AQ86V59 439 aaPredicted RBP15.07■□□□□ 0
RAB5C-203ENST00000546881 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
RAB5C-203ENST00000546881 ERBB4Q15303 1308 aa15.07■□□□□ 0
RAB5C-203ENST00000546881 CNTNAP1P78357 1384 aa15.07■□□□□ 0
RAB5C-203ENST00000546881 ITGBL1O95965 494 aaPredicted RBP15.06■□□□□ 0
RAB5C-203ENST00000546881 LMOD1P29536 600 aaPredicted RBP15.06■□□□□ 0
RAB5C-203ENST00000546881 PARP10Q53GL7 1025 aa15.06■□□□□ 0
RAB5C-203ENST00000546881 NLRP3Q96P20 1036 aa15.06■□□□□ 0
RAB5C-203ENST00000546881 CRAMP1Q96RY5 1269 aa15.06■□□□□ 0
RAB5C-203ENST00000546881 RIC1Q4ADV7 1423 aa15.06■□□□□ 0
RAB5C-203ENST00000546881 SNED1Q8TER0 1413 aa15.06■□□□□ 0
RAB5C-203ENST00000546881 PCNTO95613 3336 aa15.05■□□□□ -0
RAB5C-203ENST00000546881 AIMP1Q12904 312 aaKnown RBP15.05■□□□□ -0
RAB5C-203ENST00000546881 NEUROD2Q15784 382 aa15.05■□□□□ -0
RAB5C-203ENST00000546881 PROSER3Q2NL68 480 aa15.05■□□□□ -0
RAB5C-203ENST00000546881 CNTROBQ8N137 903 aa15.05■□□□□ -0
RAB5C-203ENST00000546881 UTP14AQ9BVJ6 771 aaKnown RBP15.05■□□□□ -0
RAB5C-203ENST00000546881 COL4A5P29400 1685 aa15.05■□□□□ -0
RAB5C-203ENST00000546881 VEGFBP49765 207 aa15.04■□□□□ -0
RAB5C-203ENST00000546881 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
RAB5C-203ENST00000546881 PDIA6Q15084 440 aa15.04■□□□□ -0
RAB5C-203ENST00000546881 GRIPAP1Q4V328 841 aa15.04■□□□□ -0
RAB5C-203ENST00000546881 NIM1KQ8IY84 436 aa15.04■□□□□ -0
RAB5C-203ENST00000546881 AIDAQ96BJ3 306 aa15.04■□□□□ -0
RAB5C-203ENST00000546881 LAS1LQ9Y4W2 734 aaKnown RBP15.04■□□□□ -0
RAB5C-203ENST00000546881 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
RAB5C-203ENST00000546881 PPIP5K2O43314 1243 aa15.03■□□□□ -0
RAB5C-203ENST00000546881 TMPOP42166 694 aaKnown RBP15.03■□□□□ -0
RAB5C-203ENST00000546881 RALBP1Q15311 655 aa15.03■□□□□ -0
RAB5C-203ENST00000546881 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
RAB5C-203ENST00000546881 ABT1Q9ULW3 272 aaKnown RBP15.03■□□□□ -0
RAB5C-203ENST00000546881 FOXN1O15353 648 aa15.02■□□□□ -0
RAB5C-203ENST00000546881 EPS15P42566 896 aa15.02■□□□□ -0
RAB5C-203ENST00000546881 AOC3Q16853 763 aa15.02■□□□□ -0
RAB5C-203ENST00000546881 COPS6Q7L5N1 327 aa15.02■□□□□ -0
RAB5C-203ENST00000546881 LRP10Q7Z4F1 713 aa15.02■□□□□ -0
RAB5C-203ENST00000546881 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
RAB5C-203ENST00000546881 ZNF428Q96B54 188 aa15.02■□□□□ -0
RAB5C-203ENST00000546881 ABCC4O15439 1325 aa15.01□□□□□ -0.01
RAB5C-203ENST00000546881 HCLS1P14317 486 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-203ENST00000546881 SCNN1DP51172 638 aa15.01□□□□□ -0.01
RAB5C-203ENST00000546881 DEFB115Q30KQ5 88 aa15.01□□□□□ -0.01
RAB5C-203ENST00000546881 HSP90AB3PQ58FF7 597 aa15.01□□□□□ -0.01
RAB5C-203ENST00000546881 BABAM1Q9NWV8 329 aa15.01□□□□□ -0.01
RAB5C-203ENST00000546881 ATP6V0A2Q9Y487 856 aa15.01□□□□□ -0.01
RAB5C-203ENST00000546881 LTBP1Q14766 1721 aa15□□□□□ -0.01
RAB5C-203ENST00000546881 KRT24Q2M2I5 525 aa15□□□□□ -0.01
RAB5C-203ENST00000546881 SLC10A5Q5PT55 438 aa15□□□□□ -0.01
RAB5C-203ENST00000546881 PAXIP1Q6ZW49 1069 aaPredicted RBP15□□□□□ -0.01
RAB5C-203ENST00000546881 NLRP10Q86W26 655 aa15□□□□□ -0.01
RAB5C-203ENST00000546881 TRMT112Q9UI30 125 aaKnown RBP15□□□□□ -0.01
RAB5C-203ENST00000546881 CTCFP49711 727 aaPredicted RBP14.99□□□□□ -0.01
RAB5C-203ENST00000546881 FMR1Q06787 632 aaKnown RBP eCLIP14.99□□□□□ -0.01
RAB5C-203ENST00000546881 DDX10Q13206 875 aaKnown RBP14.99□□□□□ -0.01
RAB5C-203ENST00000546881 GRM1Q13255 1194 aa14.99□□□□□ -0.01
RAB5C-203ENST00000546881 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
RAB5C-203ENST00000546881 DPP8Q6V1X1 898 aaPredicted RBP14.99□□□□□ -0.01
RAB5C-203ENST00000546881 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
RAB5C-203ENST00000546881 SUPT20HQ8NEM7 779 aa14.99□□□□□ -0.01
RAB5C-203ENST00000546881 DDX21Q9NR30 783 aaKnown RBP eCLIP14.99□□□□□ -0.01
RAB5C-203ENST00000546881 ANKRD36CQ5JPF3 1778 aa14.98□□□□□ -0.01
RAB5C-203ENST00000546881 MYBBP1AQ9BQG0 1328 aaKnown RBP14.98□□□□□ -0.01
RAB5C-203ENST00000546881 RASSF10A6NK89 507 aa14.98□□□□□ -0.01
RAB5C-203ENST00000546881 USP50Q70EL3 339 aaPredicted RBP14.98□□□□□ -0.01
RAB5C-203ENST00000546881 MPNDQ8N594 471 aa14.98□□□□□ -0.01
RAB5C-203ENST00000546881 CHPF2Q9P2E5 772 aa14.98□□□□□ -0.01
RAB5C-203ENST00000546881 SH3TC1Q8TE82 1336 aa14.97□□□□□ -0.01
RAB5C-203ENST00000546881 WDR33Q9C0J8 1336 aaKnown RBP14.97□□□□□ -0.01
RAB5C-203ENST00000546881 BBOX1O75936 387 aa14.97□□□□□ -0.01
RAB5C-203ENST00000546881 TCIRG1Q13488 830 aa14.97□□□□□ -0.01
RAB5C-203ENST00000546881 ZNRF3Q9ULT6 936 aa14.97□□□□□ -0.01
RAB5C-203ENST00000546881 LAMB2P55268 1798 aa14.97□□□□□ -0.01
RAB5C-203ENST00000546881 TRAF5O00463 557 aa14.96□□□□□ -0.01
RAB5C-203ENST00000546881 LBX1P52954 281 aa14.96□□□□□ -0.01
RAB5C-203ENST00000546881 CXCL9Q07325 125 aa14.96□□□□□ -0.01
RAB5C-203ENST00000546881 HDGFL1Q5TGJ6 251 aa14.96□□□□□ -0.01
RAB5C-203ENST00000546881 SP8Q8IXZ3 490 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms