RNA–Protein interactions for RNA: ENST00000545247.6

TSG101-210, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-210ENST00000545247 NECTIN2Q92692 538 aa25.02■■□□□ 1.6
TSG101-210ENST00000545247 RPGRQ92834 1020 aaKnown RBP25.02■■□□□ 1.6
TSG101-210ENST00000545247 L3MBTL3Q96JM7 780 aaPredicted RBP25.02■■□□□ 1.6
TSG101-210ENST00000545247 BABAM1Q9NWV8 329 aa25.02■■□□□ 1.6
TSG101-210ENST00000545247 RIC1Q4ADV7 1423 aa25.02■■□□□ 1.6
TSG101-210ENST00000545247 HOXA10P31260 410 aaPredicted RBP25.01■■□□□ 1.59
TSG101-210ENST00000545247 IQCA1LA6NCM1 817 aa25■■□□□ 1.59
TSG101-210ENST00000545247 TAF1DQ9H5J8 278 aaPredicted RBP25■■□□□ 1.59
TSG101-210ENST00000545247 ANKRD36CQ5JPF3 1778 aa25■■□□□ 1.59
TSG101-210ENST00000545247 PCNTO95613 3336 aa24.99■■□□□ 1.59
TSG101-210ENST00000545247 KRT24Q2M2I5 525 aa24.99■■□□□ 1.59
TSG101-210ENST00000545247 PPP1R42Q7Z4L9 355 aa24.99■■□□□ 1.59
TSG101-210ENST00000545247 PSMD1Q99460 953 aa24.99■■□□□ 1.59
TSG101-210ENST00000545247 COL4A5P29400 1685 aa24.98■■□□□ 1.59
TSG101-210ENST00000545247 FZD9O00144 591 aa24.98■■□□□ 1.59
TSG101-210ENST00000545247 TCERG1O14776 1098 aaKnown RBP24.98■■□□□ 1.59
TSG101-210ENST00000545247 PARP10Q53GL7 1025 aa24.98■■□□□ 1.59
TSG101-210ENST00000545247 AIMP1Q12904 312 aaKnown RBP24.97■■□□□ 1.59
TSG101-210ENST00000545247 COPS6Q7L5N1 327 aa24.97■■□□□ 1.59
TSG101-210ENST00000545247 RBM17Q96I25 401 aaKnown RBP24.97■■□□□ 1.59
TSG101-210ENST00000545247 CRAMP1Q96RY5 1269 aa24.97■■□□□ 1.59
TSG101-210ENST00000545247 TRIM35Q9UPQ4 493 aa24.97■■□□□ 1.59
TSG101-210ENST00000545247 LAMB2P55268 1798 aa24.96■■□□□ 1.59
TSG101-210ENST00000545247 CC2D2BQ6DHV5 1058 aa24.96■■□□□ 1.59
TSG101-210ENST00000545247 LDHDQ86WU2 507 aa24.96■■□□□ 1.59
TSG101-210ENST00000545247 RUNDC1Q96C34 613 aa24.96■■□□□ 1.59
TSG101-210ENST00000545247 UTP14AQ9BVJ6 771 aaKnown RBP24.96■■□□□ 1.59
TSG101-210ENST00000545247 LAS1LQ9Y4W2 734 aaKnown RBP24.96■■□□□ 1.59
TSG101-210ENST00000545247 RNF123Q5XPI4 1314 aa24.95■■□□□ 1.58
TSG101-210ENST00000545247 CHL1O00533 1208 aa24.95■■□□□ 1.58
TSG101-210ENST00000545247 PPEF1O14829 653 aaPredicted RBP24.95■■□□□ 1.58
TSG101-210ENST00000545247 WDR43Q15061 677 aaKnown RBP eCLIP24.95■■□□□ 1.58
TSG101-210ENST00000545247 EAPPQ56P03 285 aaPredicted RBP24.95■■□□□ 1.58
TSG101-210ENST00000545247 XAGE3Q8WTP9 111 aa24.95■■□□□ 1.58
TSG101-210ENST00000545247 HACL1Q9UJ83 578 aa24.95■■□□□ 1.58
TSG101-210ENST00000545247 COL13A1Q5TAT6 717 aaPredicted RBP24.94■■□□□ 1.58
TSG101-210ENST00000545247 JDP2Q8WYK2 163 aa24.94■■□□□ 1.58
TSG101-210ENST00000545247 NLRP3Q96P20 1036 aa24.94■■□□□ 1.58
TSG101-210ENST00000545247 ADAMTS8Q9UP79 889 aa24.94■■□□□ 1.58
TSG101-210ENST00000545247 ADAMTSL1Q8N6G6 1762 aa24.93■■□□□ 1.58
TSG101-210ENST00000545247 EPHX2P34913 555 aa24.93■■□□□ 1.58
TSG101-210ENST00000545247 SLC10A5Q5PT55 438 aa24.93■■□□□ 1.58
TSG101-210ENST00000545247 CREBZFQ9NS37 354 aa24.93■■□□□ 1.58
TSG101-210ENST00000545247 PASKQ96RG2 1323 aa24.92■■□□□ 1.58
TSG101-210ENST00000545247 GPC2Q8N158 579 aa24.92■■□□□ 1.58
TSG101-210ENST00000545247 DDX21Q9NR30 783 aaKnown RBP eCLIP24.92■■□□□ 1.58
TSG101-210ENST00000545247 NLRP10Q86W26 655 aa24.91■■□□□ 1.58
TSG101-210ENST00000545247 MKRN1Q9UHC7 482 aaKnown RBP24.91■■□□□ 1.58
TSG101-210ENST00000545247 CLEC11AQ9Y240 323 aa24.91■■□□□ 1.58
TSG101-210ENST00000545247 TAF1P21675 1872 aa24.91■■□□□ 1.58
TSG101-210ENST00000545247 ITGBL1O95965 494 aaPredicted RBP24.9■■□□□ 1.58
TSG101-210ENST00000545247 HSPA1AP0DMV8 641 aaKnown RBP24.9■■□□□ 1.58
TSG101-210ENST00000545247 HSPA1BP0DMV9 641 aaKnown RBP24.9■■□□□ 1.58
TSG101-210ENST00000545247 LARGE2Q8N3Y3 721 aa24.9■■□□□ 1.58
TSG101-210ENST00000545247 ZNF428Q96B54 188 aa24.9■■□□□ 1.58
TSG101-210ENST00000545247 CHPF2Q9P2E5 772 aa24.9■■□□□ 1.58
TSG101-210ENST00000545247 GJA3Q9Y6H8 435 aa24.9■■□□□ 1.58
TSG101-210ENST00000545247 LTBP1Q14766 1721 aa24.89■■□□□ 1.58
TSG101-210ENST00000545247 ABCC4O15439 1325 aa24.89■■□□□ 1.58
TSG101-210ENST00000545247 HCLS1P14317 486 aaPredicted RBP24.89■■□□□ 1.58
TSG101-210ENST00000545247 EIF6P56537 245 aaKnown RBP24.89■■□□□ 1.58
TSG101-210ENST00000545247 TCIRG1Q13488 830 aa24.89■■□□□ 1.58
TSG101-210ENST00000545247 GRIPAP1Q4V328 841 aa24.89■■□□□ 1.58
TSG101-210ENST00000545247 HSP90AB3PQ58FF7 597 aa24.89■■□□□ 1.58
TSG101-210ENST00000545247 ATP6V0A2Q9Y487 856 aa24.88■■□□□ 1.57
TSG101-210ENST00000545247 TRMT112Q9UI30 125 aaKnown RBP24.87■■□□□ 1.57
TSG101-210ENST00000545247 HDGFL1Q5TGJ6 251 aa24.86■■□□□ 1.57
TSG101-210ENST00000545247 MAP1SQ66K74 1059 aaPredicted RBP24.86■■□□□ 1.57
TSG101-210ENST00000545247 PNMA8AQ86V59 439 aaPredicted RBP24.86■■□□□ 1.57
TSG101-210ENST00000545247 PRKRIP1Q9H875 184 aaPredicted RBP24.86■■□□□ 1.57
TSG101-210ENST00000545247 PPIP5K2O43314 1243 aa24.85■■□□□ 1.57
TSG101-210ENST00000545247 AOC3Q16853 763 aa24.85■■□□□ 1.57
TSG101-210ENST00000545247 DDX60Q8IY21 1712 aaKnown RBP24.84■■□□□ 1.57
TSG101-210ENST00000545247 NIM1KQ8IY84 436 aa24.84■■□□□ 1.57
TSG101-210ENST00000545247 TMX4Q9H1E5 349 aaPredicted RBP24.84■■□□□ 1.57
TSG101-210ENST00000545247 SH3TC1Q8TE82 1336 aa24.84■■□□□ 1.57
TSG101-210ENST00000545247 CNTNAP1P78357 1384 aa24.83■■□□□ 1.57
TSG101-210ENST00000545247 TMEM88BA6NKF7 163 aa24.83■■□□□ 1.57
TSG101-210ENST00000545247 EPS15P42566 896 aa24.83■■□□□ 1.57
TSG101-210ENST00000545247 SCNN1DP51172 638 aa24.83■■□□□ 1.57
TSG101-210ENST00000545247 CNTROBQ8N137 903 aa24.83■■□□□ 1.57
TSG101-210ENST00000545247 CFAP44Q96MT7 982 aa24.83■■□□□ 1.57
TSG101-210ENST00000545247 BBOX1O75936 387 aa24.82■■□□□ 1.56
TSG101-210ENST00000545247 HOXB7P09629 217 aa24.82■■□□□ 1.56
TSG101-210ENST00000545247 DUSP27Q5VZP5 1158 aa24.82■■□□□ 1.56
TSG101-210ENST00000545247 ANKRD13DQ6ZTN6 518 aa24.82■■□□□ 1.56
TSG101-210ENST00000545247 PLBD2Q8NHP8 589 aa24.82■■□□□ 1.56
TSG101-210ENST00000545247 MBIPQ9NS73 344 aa24.82■■□□□ 1.56
TSG101-210ENST00000545247 LMOD1P29536 600 aaPredicted RBP24.81■■□□□ 1.56
TSG101-210ENST00000545247 DDX46Q7L014 1031 aaKnown RBP24.81■■□□□ 1.56
TSG101-210ENST00000545247 SP8Q8IXZ3 490 aa24.81■■□□□ 1.56
TSG101-210ENST00000545247 DBF4Q9UBU7 674 aaPredicted RBP24.81■■□□□ 1.56
TSG101-210ENST00000545247 ATP5J2-PTCD1G3V325 749 aa24.8■■□□□ 1.56
TSG101-210ENST00000545247 RTFDC1Q9BY42 306 aaPredicted RBP24.8■■□□□ 1.56
TSG101-210ENST00000545247 APAF1O14727 1248 aa24.79■■□□□ 1.56
TSG101-210ENST00000545247 GRAPQ13588 217 aa24.79■■□□□ 1.56
TSG101-210ENST00000545247 DPP8Q6V1X1 898 aaPredicted RBP24.79■■□□□ 1.56
TSG101-210ENST00000545247 MPNDQ8N594 471 aa24.79■■□□□ 1.56
TSG101-210ENST00000545247 GRAPLQ8TC17 118 aaPredicted RBP24.79■■□□□ 1.56
TSG101-210ENST00000545247 ISCA1Q9BUE6 129 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms