RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 KIF6Q6ZMV9 814 aa16.27■□□□□ 0.2
ACTN1-206ENST00000544964 SLC51AQ86UW1 340 aa16.27■□□□□ 0.2
ACTN1-206ENST00000544964 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-206ENST00000544964 TSPYL4Q9UJ04 414 aa16.27■□□□□ 0.2
ACTN1-206ENST00000544964 NTSR2O95665 410 aa16.26■□□□□ 0.19
ACTN1-206ENST00000544964 PDIA6Q15084 440 aa16.26■□□□□ 0.19
ACTN1-206ENST00000544964 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
ACTN1-206ENST00000544964 LTBP1Q14766 1721 aa16.25■□□□□ 0.19
ACTN1-206ENST00000544964 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
ACTN1-206ENST00000544964 SUSD4Q5VX71 490 aa16.25■□□□□ 0.19
ACTN1-206ENST00000544964 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
ACTN1-206ENST00000544964 RTKN2Q8IZC4 609 aa16.25■□□□□ 0.19
ACTN1-206ENST00000544964 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-206ENST00000544964 GTF2E1P29083 439 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-206ENST00000544964 ALDH1B1P30837 517 aa16.24■□□□□ 0.19
ACTN1-206ENST00000544964 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
ACTN1-206ENST00000544964 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
ACTN1-206ENST00000544964 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
ACTN1-206ENST00000544964 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-206ENST00000544964 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
ACTN1-206ENST00000544964 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
ACTN1-206ENST00000544964 PSMD1Q99460 953 aa16.23■□□□□ 0.19
ACTN1-206ENST00000544964 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-206ENST00000544964 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
ACTN1-206ENST00000544964 ANXA1P04083 346 aa16.22■□□□□ 0.19
ACTN1-206ENST00000544964 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
ACTN1-206ENST00000544964 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
ACTN1-206ENST00000544964 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
ACTN1-206ENST00000544964 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
ACTN1-206ENST00000544964 FZD9O00144 591 aa16.21■□□□□ 0.19
ACTN1-206ENST00000544964 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
ACTN1-206ENST00000544964 DDX60Q8IY21 1712 aaKnown RBP16.21■□□□□ 0.19
ACTN1-206ENST00000544964 EIF2S2P20042 333 aaKnown RBP16.2■□□□□ 0.18
ACTN1-206ENST00000544964 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
ACTN1-206ENST00000544964 PARP10Q53GL7 1025 aa16.2■□□□□ 0.18
ACTN1-206ENST00000544964 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
ACTN1-206ENST00000544964 CREBZFQ9NS37 354 aa16.2■□□□□ 0.18
ACTN1-206ENST00000544964 TAF1P21675 1872 aa16.2■□□□□ 0.18
ACTN1-206ENST00000544964 RNF123Q5XPI4 1314 aa16.19■□□□□ 0.18
ACTN1-206ENST00000544964 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
ACTN1-206ENST00000544964 COL13A1Q5TAT6 717 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-206ENST00000544964 CRAMP1Q96RY5 1269 aa16.19■□□□□ 0.18
ACTN1-206ENST00000544964 CHL1O00533 1208 aa16.18■□□□□ 0.18
ACTN1-206ENST00000544964 PPEF1O14829 653 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-206ENST00000544964 CC2D2BQ6DHV5 1058 aa16.18■□□□□ 0.18
ACTN1-206ENST00000544964 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
ACTN1-206ENST00000544964 HACL1Q9UJ83 578 aa16.18■□□□□ 0.18
ACTN1-206ENST00000544964 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
ACTN1-206ENST00000544964 HSPA1AP0DMV8 641 aaKnown RBP16.17■□□□□ 0.18
ACTN1-206ENST00000544964 HSPA1BP0DMV9 641 aaKnown RBP16.17■□□□□ 0.18
ACTN1-206ENST00000544964 EPHX2P34913 555 aa16.17■□□□□ 0.18
ACTN1-206ENST00000544964 WWC1Q8IX03 1113 aa16.17■□□□□ 0.18
ACTN1-206ENST00000544964 GPC2Q8N158 579 aa16.17■□□□□ 0.18
ACTN1-206ENST00000544964 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
ACTN1-206ENST00000544964 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
ACTN1-206ENST00000544964 ABCC4O15439 1325 aa16.17■□□□□ 0.18
ACTN1-206ENST00000544964 CNTNAP1P78357 1384 aa16.16■□□□□ 0.18
ACTN1-206ENST00000544964 COL4A1P02462 1669 aa16.16■□□□□ 0.18
ACTN1-206ENST00000544964 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-206ENST00000544964 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
ACTN1-206ENST00000544964 EAPPQ56P03 285 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-206ENST00000544964 SLC10A5Q5PT55 438 aa16.16■□□□□ 0.18
ACTN1-206ENST00000544964 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
ACTN1-206ENST00000544964 NLRP10Q86W26 655 aa16.16■□□□□ 0.18
ACTN1-206ENST00000544964 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
ACTN1-206ENST00000544964 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
ACTN1-206ENST00000544964 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
ACTN1-206ENST00000544964 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
ACTN1-206ENST00000544964 DDX21Q9NR30 783 aaKnown RBP eCLIP16.15■□□□□ 0.18
ACTN1-206ENST00000544964 CHPF2Q9P2E5 772 aa16.15■□□□□ 0.18
ACTN1-206ENST00000544964 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
ACTN1-206ENST00000544964 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
ACTN1-206ENST00000544964 AIMP1Q12904 312 aaKnown RBP16.14■□□□□ 0.17
ACTN1-206ENST00000544964 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.17
ACTN1-206ENST00000544964 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
ACTN1-206ENST00000544964 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
ACTN1-206ENST00000544964 ATP6V0A2Q9Y487 856 aa16.14■□□□□ 0.17
ACTN1-206ENST00000544964 TCERG1O14776 1098 aaKnown RBP16.13■□□□□ 0.17
ACTN1-206ENST00000544964 SCNN1DP51172 638 aa16.13■□□□□ 0.17
ACTN1-206ENST00000544964 HSP90AB3PQ58FF7 597 aa16.13■□□□□ 0.17
ACTN1-206ENST00000544964 LARGE2Q8N3Y3 721 aa16.13■□□□□ 0.17
ACTN1-206ENST00000544964 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
ACTN1-206ENST00000544964 TRPM7Q96QT4 1865 aa16.12■□□□□ 0.17
ACTN1-206ENST00000544964 HOXB7P09629 217 aa16.12■□□□□ 0.17
ACTN1-206ENST00000544964 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-206ENST00000544964 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
ACTN1-206ENST00000544964 CALD1Q05682 793 aaKnown RBP16.12■□□□□ 0.17
ACTN1-206ENST00000544964 TCIRG1Q13488 830 aa16.12■□□□□ 0.17
ACTN1-206ENST00000544964 AOC3Q16853 763 aa16.12■□□□□ 0.17
ACTN1-206ENST00000544964 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-206ENST00000544964 PPIP5K2O43314 1243 aa16.11■□□□□ 0.17
ACTN1-206ENST00000544964 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
ACTN1-206ENST00000544964 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-206ENST00000544964 RTFDC1Q9BY42 306 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-206ENST00000544964 GJA3Q9Y6H8 435 aa16.11■□□□□ 0.17
ACTN1-206ENST00000544964 SH3TC1Q8TE82 1336 aa16.11■□□□□ 0.17
ACTN1-206ENST00000544964 TMEM88BA6NKF7 163 aa16.1■□□□□ 0.17
ACTN1-206ENST00000544964 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
ACTN1-206ENST00000544964 NIM1KQ8IY84 436 aa16.1■□□□□ 0.17
ACTN1-206ENST00000544964 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms