RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
SEMA4D-224ENST00000544513 RIPK4P57078 832 aa18.28■□□□□ 0.52
SEMA4D-224ENST00000544513 CC2D2BQ6DHV5 1058 aa18.28■□□□□ 0.52
SEMA4D-224ENST00000544513 CRAMP1Q96RY5 1269 aa18.27■□□□□ 0.52
SEMA4D-224ENST00000544513 TMPOP42166 694 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-224ENST00000544513 GRIPAP1Q4V328 841 aa18.26■□□□□ 0.51
SEMA4D-224ENST00000544513 C3orf67Q6ZVT6 689 aa18.26■□□□□ 0.51
SEMA4D-224ENST00000544513 ITGBL1O95965 494 aaPredicted RBP18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 PARP10Q53GL7 1025 aa18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 HACL1Q9UJ83 578 aa18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 COL4A5P29400 1685 aa18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 ADAMTSL1Q8N6G6 1762 aa18.25■□□□□ 0.51
SEMA4D-224ENST00000544513 GPC2Q8N158 579 aa18.24■□□□□ 0.51
SEMA4D-224ENST00000544513 HSPA1AP0DMV8 641 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-224ENST00000544513 HSPA1BP0DMV9 641 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-224ENST00000544513 EPHX2P34913 555 aa18.23■□□□□ 0.51
SEMA4D-224ENST00000544513 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
SEMA4D-224ENST00000544513 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
SEMA4D-224ENST00000544513 JDP2Q8WYK2 163 aa18.23■□□□□ 0.51
SEMA4D-224ENST00000544513 RBM17Q96I25 401 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-224ENST00000544513 CHL1O00533 1208 aa18.22■□□□□ 0.51
SEMA4D-224ENST00000544513 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
SEMA4D-224ENST00000544513 SLC51AQ86UW1 340 aa18.22■□□□□ 0.51
SEMA4D-224ENST00000544513 PNMA8AQ86V59 439 aaPredicted RBP18.22■□□□□ 0.51
SEMA4D-224ENST00000544513 CNTNAP1P78357 1384 aa18.21■□□□□ 0.51
SEMA4D-224ENST00000544513 ANXA1P04083 346 aa18.21■□□□□ 0.51
SEMA4D-224ENST00000544513 NLRP3Q96P20 1036 aa18.21■□□□□ 0.51
SEMA4D-224ENST00000544513 UTP14AQ9BVJ6 771 aaKnown RBP18.21■□□□□ 0.51
SEMA4D-224ENST00000544513 RNF123Q5XPI4 1314 aa18.21■□□□□ 0.51
SEMA4D-224ENST00000544513 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
SEMA4D-224ENST00000544513 PPEF1O14829 653 aaPredicted RBP18.2■□□□□ 0.5
SEMA4D-224ENST00000544513 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
SEMA4D-224ENST00000544513 MKRN1Q9UHC7 482 aaKnown RBP18.2■□□□□ 0.5
SEMA4D-224ENST00000544513 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
SEMA4D-224ENST00000544513 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
SEMA4D-224ENST00000544513 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
SEMA4D-224ENST00000544513 TMEM88BA6NKF7 163 aa18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 EIF6P56537 245 aaKnown RBP18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 DDX10Q13206 875 aaKnown RBP18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 HSP90AB3PQ58FF7 597 aa18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 NLRP10Q86W26 655 aa18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 VPS33BQ9H267 617 aa18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
SEMA4D-224ENST00000544513 SCNN1DP51172 638 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 TNS4Q8IZW8 715 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 CNTROBQ8N137 903 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 LARGE2Q8N3Y3 721 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 RUNDC1Q96C34 613 aa18.17■□□□□ 0.5
SEMA4D-224ENST00000544513 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
SEMA4D-224ENST00000544513 BBOX1O75936 387 aa18.16■□□□□ 0.5
SEMA4D-224ENST00000544513 MAP1SQ66K74 1059 aaPredicted RBP18.16■□□□□ 0.5
SEMA4D-224ENST00000544513 RTFDC1Q9BY42 306 aaPredicted RBP18.16■□□□□ 0.5
SEMA4D-224ENST00000544513 CLEC11AQ9Y240 323 aa18.16■□□□□ 0.5
SEMA4D-224ENST00000544513 ANKRD36CQ5JPF3 1778 aa18.16■□□□□ 0.5
SEMA4D-224ENST00000544513 ABCC4O15439 1325 aa18.16■□□□□ 0.5
SEMA4D-224ENST00000544513 VEGFBP49765 207 aa18.15■□□□□ 0.5
SEMA4D-224ENST00000544513 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
SEMA4D-224ENST00000544513 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
SEMA4D-224ENST00000544513 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
SEMA4D-224ENST00000544513 HOXB7P09629 217 aa18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 HCLS1P14317 486 aaPredicted RBP18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 EPS15P42566 896 aa18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 AIMP1Q12904 312 aaKnown RBP18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 SP8Q8IXZ3 490 aa18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 NIM1KQ8IY84 436 aa18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 LAMB2P55268 1798 aa18.14■□□□□ 0.49
SEMA4D-224ENST00000544513 RASSF10A6NK89 507 aa18.13■□□□□ 0.49
SEMA4D-224ENST00000544513 PPIP5K2O43314 1243 aa18.13■□□□□ 0.49
SEMA4D-224ENST00000544513 LMOD1P29536 600 aaPredicted RBP18.13■□□□□ 0.49
SEMA4D-224ENST00000544513 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
SEMA4D-224ENST00000544513 TRMT112Q9UI30 125 aaKnown RBP18.13■□□□□ 0.49
SEMA4D-224ENST00000544513 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
SEMA4D-224ENST00000544513 AOC3Q16853 763 aa18.12■□□□□ 0.49
SEMA4D-224ENST00000544513 TMX4Q9H1E5 349 aaPredicted RBP18.12■□□□□ 0.49
SEMA4D-224ENST00000544513 ZNRF3Q9ULT6 936 aa18.12■□□□□ 0.49
SEMA4D-224ENST00000544513 CXCL9Q07325 125 aa18.11■□□□□ 0.49
SEMA4D-224ENST00000544513 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
SEMA4D-224ENST00000544513 USP50Q70EL3 339 aaPredicted RBP18.11■□□□□ 0.49
SEMA4D-224ENST00000544513 SUPT20HQ8NEM7 779 aa18.11■□□□□ 0.49
SEMA4D-224ENST00000544513 PLBD2Q8NHP8 589 aa18.11■□□□□ 0.49
SEMA4D-224ENST00000544513 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
SEMA4D-224ENST00000544513 FOXN1O15353 648 aa18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 KIAA2012Q0VF49 1180 aa18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 GRAPQ13588 217 aa18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 HDGFL1Q5TGJ6 251 aa18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 DPP8Q6V1X1 898 aaPredicted RBP18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 ANKRD13DQ6ZTN6 518 aa18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 GRAPLQ8TC17 118 aaPredicted RBP18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 ISCA1Q9BUE6 129 aa18.1■□□□□ 0.49
SEMA4D-224ENST00000544513 GPRC5DQ9NZD1 345 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms