RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.42
CHD4-210ENST00000544040 UBE2HP62256 183 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 CKAP4Q07065 602 aaKnown RBP17.7■□□□□ 0.42
CHD4-210ENST00000544040 RRAGBQ5VZM2 374 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 SNRKQ9NRH2 765 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
CHD4-210ENST00000544040 NECAB1Q8N987 351 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 AKR1B10O60218 316 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 KIF4AO95239 1232 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 CNPY2Q9Y2B0 182 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 PRIMPOLQ96LW4 560 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 SELENOSQ9BQE4 189 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.424e-8■■■□□ 14.6
CHD4-210ENST00000544040 CCDC102BQ68D86 513 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 EXOC1Q9NV70 894 aa17.7■□□□□ 0.42
CHD4-210ENST00000544040 MCM5P33992 734 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 CTAGE15A4D2H0 777 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 TMEM110-MUSTN1A8MSY1 372 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 CTAGE8P0CG41 777 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 GJC1P36383 396 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 CTAGE6Q86UF2 777 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 CTAGE4Q8IX94 777 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 SMIM23A6NLE4 172 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 SKILP12757 684 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 CEP57Q86XR8 500 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 RNF41Q9H4P4 317 aaPredicted RBP17.69■□□□□ 0.42
CHD4-210ENST00000544040 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 UBA7P41226 1012 aa17.69■□□□□ 0.42
CHD4-210ENST00000544040 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.423e-6■□□□□ 9.5
CHD4-210ENST00000544040 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 BICD1Q96G01 975 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 ACTN2P35609 894 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 KIF21BO75037 1637 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 CAPZA3Q96KX2 299 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
CHD4-210ENST00000544040 KRT13P13646 458 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 DAAM2Q86T65 1068 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 ARFGAP3Q9NP61 516 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 UVSSAQ2YD98 709 aa17.68■□□□□ 0.42
CHD4-210ENST00000544040 IQCGQ9H095 443 aaKnown RBP17.68■□□□□ 0.42
CHD4-210ENST00000544040 PABPN1LA6NDY0 278 aaKnown RBP17.67■□□□□ 0.42
CHD4-210ENST00000544040 ZPR1O75312 459 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 DNAJC21Q5F1R6 531 aaKnown RBP17.67■□□□□ 0.42
CHD4-210ENST00000544040 CCDC186Q7Z3E2 898 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 NSRP1Q9H0G5 558 aaKnown RBP17.67■□□□□ 0.42
CHD4-210ENST00000544040 EHMT1Q9H9B1 1298 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 PIP4K2BP78356 416 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 TMOD3Q9NYL9 352 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 IGSF3O75054 1194 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 SYKP43405 635 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 EHBP1Q8NDI1 1231 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 NEK1Q96PY6 1258 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
CHD4-210ENST00000544040 GPTP24298 496 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 MPRIPQ6WCQ1 1025 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 ZNF354CQ86Y25 554 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 CCDC63Q8NA47 563 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 KAT14Q9H8E8 782 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
CHD4-210ENST00000544040 TTLL12Q14166 644 aaPredicted RBP17.66■□□□□ 0.42
CHD4-210ENST00000544040 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
CHD4-210ENST00000544040 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 ARID5AQ03989 594 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 IFI16Q16666 785 aaKnown RBP17.66■□□□□ 0.42
CHD4-210ENST00000544040 VPS18Q9P253 973 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 ZNF652Q9Y2D9 606 aa17.66■□□□□ 0.42
CHD4-210ENST00000544040 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 AOPEPQ8N6M6 819 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 CFTRP13569 1480 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 CAPN2P17655 700 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 TBC1D5Q92609 795 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
CHD4-210ENST00000544040 PSMC4P43686 418 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 KANK3Q6NY19 840 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 CFAP57Q96MR6 1250 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.65■□□□□ 0.428e-10■■■■□ 22.5
CHD4-210ENST00000544040 IVLP07476 585 aa17.65■□□□□ 0.42
CHD4-210ENST00000544040 KLHL40Q2TBA0 621 aa17.64■□□□□ 0.42
CHD4-210ENST00000544040 TMEM87AQ8NBN3 555 aa17.64■□□□□ 0.42
CHD4-210ENST00000544040 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 TRIM27P14373 513 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 ZSCAN22P10073 491 aaPredicted RBP17.64■□□□□ 0.41
CHD4-210ENST00000544040 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
CHD4-210ENST00000544040 MFSD6Q6ZSS7 791 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 GSTA5Q7RTV2 222 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 OTUD6BQ8N6M0 293 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 CCDC174Q6PII3 467 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 DNAJC25Q9H1X3 360 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 PHACTR2O75167 634 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 TBCAO75347 108 aaKnown RBP17.64■□□□□ 0.41
CHD4-210ENST00000544040 CCDC121Q6ZUS5 278 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 MAP3K2Q9Y2U5 619 aa17.64■□□□□ 0.41
CHD4-210ENST00000544040 FERMT1Q9BQL6 677 aa17.63■□□□□ 0.41
CHD4-210ENST00000544040 ZEB2O60315 1214 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms