RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 UBN2Q6ZU65 1347 aa29.83■■■□□ 2.37
CDKN3-207ENST00000543789 GRIPAP1Q4V328 841 aa29.83■■■□□ 2.37
CDKN3-207ENST00000543789 ZNF34Q8IZ26 560 aa29.83■■■□□ 2.37
CDKN3-207ENST00000543789 CACNA1SQ13698 1873 aa29.82■■■□□ 2.37
CDKN3-207ENST00000543789 RBM17Q96I25 401 aaKnown RBP29.82■■■□□ 2.36
CDKN3-207ENST00000543789 IBTKQ9P2D0 1353 aaPredicted RBP29.81■■■□□ 2.36
CDKN3-207ENST00000543789 ERBB4Q15303 1308 aa29.81■■■□□ 2.36
CDKN3-207ENST00000543789 EIF6P56537 245 aaKnown RBP29.81■■■□□ 2.36
CDKN3-207ENST00000543789 GIGYF2Q6Y7W6 1299 aaKnown RBP29.81■■■□□ 2.36
CDKN3-207ENST00000543789 CRAMP1Q96RY5 1269 aa29.81■■■□□ 2.36
CDKN3-207ENST00000543789 CNTROBQ8N137 903 aa29.8■■■□□ 2.36
CDKN3-207ENST00000543789 TSPYL4Q9UJ04 414 aa29.8■■■□□ 2.36
CDKN3-207ENST00000543789 SNED1Q8TER0 1413 aa29.79■■■□□ 2.36
CDKN3-207ENST00000543789 PPP1R42Q7Z4L9 355 aa29.79■■■□□ 2.36
CDKN3-207ENST00000543789 SCN4AP35499 1836 aa29.78■■■□□ 2.36
CDKN3-207ENST00000543789 NTSR2O95665 410 aa29.78■■■□□ 2.36
CDKN3-207ENST00000543789 MAP1SQ66K74 1059 aaPredicted RBP29.78■■■□□ 2.36
CDKN3-207ENST00000543789 GJA3Q9Y6H8 435 aa29.78■■■□□ 2.36
CDKN3-207ENST00000543789 RIC1Q4ADV7 1423 aa29.78■■■□□ 2.36
CDKN3-207ENST00000543789 VEGFBP49765 207 aa29.77■■■□□ 2.36
CDKN3-207ENST00000543789 PARP10Q53GL7 1025 aa29.77■■■□□ 2.36
CDKN3-207ENST00000543789 LARGE2Q8N3Y3 721 aa29.77■■■□□ 2.36
CDKN3-207ENST00000543789 TCERG1O14776 1098 aaKnown RBP29.76■■■□□ 2.35
CDKN3-207ENST00000543789 PPEF1O14829 653 aaPredicted RBP29.76■■■□□ 2.35
CDKN3-207ENST00000543789 EIF2S2P20042 333 aaKnown RBP29.76■■■□□ 2.35
CDKN3-207ENST00000543789 NLRP3Q96P20 1036 aa29.76■■■□□ 2.35
CDKN3-207ENST00000543789 RIPK4P57078 832 aa29.75■■■□□ 2.35
CDKN3-207ENST00000543789 LAMB4A4D0S4 1761 aa29.75■■■□□ 2.35
CDKN3-207ENST00000543789 FOXN1O15353 648 aa29.74■■■□□ 2.35
CDKN3-207ENST00000543789 LMOD1P29536 600 aaPredicted RBP29.74■■■□□ 2.35
CDKN3-207ENST00000543789 PDIA6Q15084 440 aa29.74■■■□□ 2.35
CDKN3-207ENST00000543789 C3orf67Q6ZVT6 689 aa29.74■■■□□ 2.35
CDKN3-207ENST00000543789 LRP10Q7Z4F1 713 aa29.74■■■□□ 2.35
CDKN3-207ENST00000543789 UTP14AQ9BVJ6 771 aaKnown RBP29.74■■■□□ 2.35
CDKN3-207ENST00000543789 TMX4Q9H1E5 349 aaPredicted RBP29.74■■■□□ 2.35
CDKN3-207ENST00000543789 KDM3BQ7LBC6 1761 aa29.73■■■□□ 2.35
CDKN3-207ENST00000543789 SLC10A5Q5PT55 438 aa29.73■■■□□ 2.35
CDKN3-207ENST00000543789 BABAM1Q9NWV8 329 aa29.73■■■□□ 2.35
CDKN3-207ENST00000543789 AIDAQ96BJ3 306 aa29.72■■■□□ 2.35
CDKN3-207ENST00000543789 DEFB115Q30KQ5 88 aa29.71■■■□□ 2.35
CDKN3-207ENST00000543789 RASSF10A6NK89 507 aa29.7■■■□□ 2.35
CDKN3-207ENST00000543789 PROSER3Q2NL68 480 aa29.7■■■□□ 2.35
CDKN3-207ENST00000543789 SLC51AQ86UW1 340 aa29.7■■■□□ 2.35
CDKN3-207ENST00000543789 NIM1KQ8IY84 436 aa29.7■■■□□ 2.35
CDKN3-207ENST00000543789 PRDM10Q9NQV6 1147 aa29.7■■■□□ 2.35
CDKN3-207ENST00000543789 ATP6V0A2Q9Y487 856 aa29.7■■■□□ 2.35
CDKN3-207ENST00000543789 ANXA1P04083 346 aa29.69■■■□□ 2.34
CDKN3-207ENST00000543789 EPS15P42566 896 aa29.69■■■□□ 2.34
CDKN3-207ENST00000543789 CTCFP49711 727 aaPredicted RBP29.69■■■□□ 2.34
CDKN3-207ENST00000543789 SCNN1DP51172 638 aa29.69■■■□□ 2.34
CDKN3-207ENST00000543789 PPIP5K2O43314 1243 aa29.68■■■□□ 2.34
CDKN3-207ENST00000543789 LMOD3Q0VAK6 560 aa29.68■■■□□ 2.34
CDKN3-207ENST00000543789 VPS33BQ9H267 617 aa29.68■■■□□ 2.34
CDKN3-207ENST00000543789 WBP1LQ9NX94 342 aa29.68■■■□□ 2.34
CDKN3-207ENST00000543789 DLG5Q8TDM6 1919 aa29.67■■■□□ 2.34
CDKN3-207ENST00000543789 COL4A5P29400 1685 aa29.67■■■□□ 2.34
CDKN3-207ENST00000543789 NUP98P52948 1817 aa29.67■■■□□ 2.34
CDKN3-207ENST00000543789 TMPOP42166 694 aaKnown RBP29.67■■■□□ 2.34
CDKN3-207ENST00000543789 RALBP1Q15311 655 aa29.67■■■□□ 2.34
CDKN3-207ENST00000543789 DDX21Q9NR30 783 aaKnown RBP eCLIP29.67■■■□□ 2.34
CDKN3-207ENST00000543789 HSP90AB3PQ58FF7 597 aa29.66■■■□□ 2.34
CDKN3-207ENST00000543789 USP50Q70EL3 339 aaPredicted RBP29.66■■■□□ 2.34
CDKN3-207ENST00000543789 COPS6Q7L5N1 327 aa29.66■■■□□ 2.34
CDKN3-207ENST00000543789 ABT1Q9ULW3 272 aaKnown RBP29.66■■■□□ 2.34
CDKN3-207ENST00000543789 ADAMTSL1Q8N6G6 1762 aa29.65■■■□□ 2.34
CDKN3-207ENST00000543789 BBOX1O75936 387 aa29.65■■■□□ 2.34
CDKN3-207ENST00000543789 AOC3Q16853 763 aa29.65■■■□□ 2.34
CDKN3-207ENST00000543789 NECTIN2Q92692 538 aa29.65■■■□□ 2.34
CDKN3-207ENST00000543789 AIMP1Q12904 312 aaKnown RBP29.64■■■□□ 2.34
CDKN3-207ENST00000543789 SUPT20HQ8NEM7 779 aa29.64■■■□□ 2.34
CDKN3-207ENST00000543789 ABCC4O15439 1325 aa29.64■■■□□ 2.34
CDKN3-207ENST00000543789 NLRP10Q86W26 655 aa29.63■■■□□ 2.33
CDKN3-207ENST00000543789 XAGE3Q8WTP9 111 aa29.63■■■□□ 2.33
CDKN3-207ENST00000543789 WDR33Q9C0J8 1336 aaKnown RBP29.63■■■□□ 2.33
CDKN3-207ENST00000543789 HCLS1P14317 486 aaPredicted RBP29.62■■■□□ 2.33
CDKN3-207ENST00000543789 SP8Q8IXZ3 490 aa29.62■■■□□ 2.33
CDKN3-207ENST00000543789 RTFDC1Q9BY42 306 aaPredicted RBP29.62■■■□□ 2.33
CDKN3-207ENST00000543789 TCIRG1Q13488 830 aa29.61■■■□□ 2.33
CDKN3-207ENST00000543789 ZNRF3Q9ULT6 936 aa29.61■■■□□ 2.33
CDKN3-207ENST00000543789 MAP2K1Q02750 393 aaPredicted RBP29.6■■■□□ 2.33
CDKN3-207ENST00000543789 CXCL9Q07325 125 aa29.6■■■□□ 2.33
CDKN3-207ENST00000543789 DPP8Q6V1X1 898 aaPredicted RBP29.6■■■□□ 2.33
CDKN3-207ENST00000543789 TRMT112Q9UI30 125 aaKnown RBP29.6■■■□□ 2.33
CDKN3-207ENST00000543789 LBX1P52954 281 aa29.59■■■□□ 2.33
CDKN3-207ENST00000543789 FMR1Q06787 632 aaKnown RBP eCLIP29.59■■■□□ 2.33
CDKN3-207ENST00000543789 NEUROD2Q15784 382 aa29.59■■■□□ 2.33
CDKN3-207ENST00000543789 DDX46Q7L014 1031 aaKnown RBP29.59■■■□□ 2.33
CDKN3-207ENST00000543789 MPNDQ8N594 471 aa29.59■■■□□ 2.33
CDKN3-207ENST00000543789 ADARB2Q9NS39 739 aaKnown RBP29.59■■■□□ 2.33
CDKN3-207ENST00000543789 GPRC5DQ9NZD1 345 aa29.59■■■□□ 2.33
CDKN3-207ENST00000543789 CHL1O00533 1208 aa29.58■■■□□ 2.33
CDKN3-207ENST00000543789 SH3TC1Q8TE82 1336 aa29.57■■■□□ 2.32
CDKN3-207ENST00000543789 TRAF5O00463 557 aa29.56■■■□□ 2.32
CDKN3-207ENST00000543789 CST9Q5W186 159 aa29.56■■■□□ 2.32
CDKN3-207ENST00000543789 CCDC146Q8IYE0 955 aa29.56■■■□□ 2.32
CDKN3-207ENST00000543789 LTBP1Q14766 1721 aa29.55■■■□□ 2.32
CDKN3-207ENST00000543789 KIAA2012Q0VF49 1180 aa29.55■■■□□ 2.32
CDKN3-207ENST00000543789 GRAPQ13588 217 aa29.55■■■□□ 2.32
CDKN3-207ENST00000543789 KRT24Q2M2I5 525 aa29.55■■■□□ 2.32
CDKN3-207ENST00000543789 GRAPLQ8TC17 118 aaPredicted RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms