RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 DNM1Q05193 864 aaKnown RBP15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 PTPN14Q15678 1187 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 FAM173BQ6P4H8 233 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 CHL1O00533 1208 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 CCDC57Q2TAC2 916 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 CCDC70Q6NSX1 233 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 ZSWIM4Q9H7M6 989 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 POLR3GO15318 223 aaPredicted RBP15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 MSH6P52701 1360 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 AATKQ6ZMQ8 1374 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 CPLX3Q8WVH0 158 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 IFT172Q9UG01 1749 aa15.19■□□□□ 0.02
TUBGCP2-210ENST00000543663 PREX1Q8TCU6 1659 aa15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 FAM193AP78312 1265 aa15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 AXDND1Q5T1B0 1012 aaPredicted RBP15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 UBE3BQ7Z3V4 1068 aa15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 ZFP91Q96JP5 570 aaPredicted RBP15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 URI1O94763 535 aaPredicted RBP15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 USP32Q8NFA0 1604 aa15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
TUBGCP2-210ENST00000543663 OFD1O75665 1012 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 RICTORQ6R327 1708 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 TSC1Q92574 1164 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 ABCF2Q9UG63 623 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 PTPRMP28827 1452 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 MYOM1P52179 1685 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 LRSAM1Q6UWE0 723 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 DDX46Q7L014 1031 aaKnown RBP15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 UBXN4Q92575 508 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 DCTPP1Q9H773 170 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
TUBGCP2-210ENST00000543663 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 RAB3GAP1Q15042 981 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 TRIM34Q9BYJ4 488 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 ADAMTS2O95450 1211 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 CCDC186Q7Z3E2 898 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 RHPN1Q8TCX5 695 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 RUFY1Q96T51 708 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 CGNQ9P2M7 1197 aaKnown RBP15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 DIP2BQ9P265 1576 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 GPTP24298 496 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 SART3Q15020 963 aaKnown RBP15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 COPS6Q7L5N1 327 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 RBSNQ9H1K0 784 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 SFPQP23246 707 aaKnown RBP eCLIP15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 ECHDC1Q9NTX5 307 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 RIMBP3CA6NJZ7 1639 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 RIMBP3BA6NNM3 1639 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 FLT4P35916 1363 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 RIMBP3Q9UFD9 1639 aa15.16■□□□□ 0.02
TUBGCP2-210ENST00000543663 SETD1BQ9UPS6 1966 aaKnown RBP15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 SIRT2Q8IXJ6 389 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 NLRP1Q9C000 1473 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 DHX8Q14562 1220 aaKnown RBP15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 FSIP1Q8NA03 581 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 DBF4Q9UBU7 674 aaPredicted RBP15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 PRAMEF22A3QJZ6 481 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 GOLIM4O00461 696 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 CHST3Q7LGC8 479 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 XAGE3Q8WTP9 111 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 BRF1Q92994 677 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 CCDC47Q96A33 483 aaKnown RBP15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 ESYT1Q9BSJ8 1104 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 SCAND2PQ9GZW5 306 aaPredicted RBP15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 PTPRCP08575 1304 aa15.15■□□□□ 0.02
TUBGCP2-210ENST00000543663 PLEKHG1Q9ULL1 1385 aa15.14■□□□□ 0.01
TUBGCP2-210ENST00000543663 A0A087WZG4 1122 aa15.14■□□□□ 0.01
TUBGCP2-210ENST00000543663 NOL10Q9BSC4 688 aaKnown RBP15.14■□□□□ 0.01
TUBGCP2-210ENST00000543663 PIP4K2BP78356 416 aa15.14■□□□□ 0.01
TUBGCP2-210ENST00000543663 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
TUBGCP2-210ENST00000543663 USP19O94966 1318 aa15.14■□□□□ 0.01
TUBGCP2-210ENST00000543663 PPFIBP1Q86W92 1011 aa15.14■□□□□ 0.01
TUBGCP2-210ENST00000543663 ATP2B2Q01814 1243 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 TMEM131LA2VDJ0 1609 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 PKP1Q13835 747 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 JMYQ8N9B5 988 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 ZHX3Q9H4I2 956 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 FILIP1LQ4L180 1135 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 UBE2Q2Q8WVN8 375 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 ARHGEF40Q8TER5 1519 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 CD2BP2O95400 341 aaKnown RBP15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 XBP1P17861 261 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 TDO2P48775 406 aa15.13■□□□□ 0.01
TUBGCP2-210ENST00000543663 MINDY4BA8MYZ0 360 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 IFIT1P09914 478 aaKnown RBP15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 GSPT1P15170 499 aaKnown RBP15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 DNA2P51530 1060 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 TRIM22Q8IYM9 498 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 CCDC69A6NI79 296 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 H0YHG0 523 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 C8orf76Q96K31 380 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 CENPHQ9H3R5 247 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 ZKSCAN5Q9Y2L8 839 aa15.12■□□□□ 0.01
TUBGCP2-210ENST00000543663 AMOTL1Q8IY63 956 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms