RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 PDXDC2PQ6P474 469 aa14.39□□□□□ -0.11
RFC5-209ENST00000543153 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
RFC5-209ENST00000543153 GPSM3Q9Y4H4 160 aa14.39□□□□□ -0.11
RFC5-209ENST00000543153 DISP2A7MBM2 1401 aa14.39□□□□□ -0.11
RFC5-209ENST00000543153 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
RFC5-209ENST00000543153 IFFO2Q5TF58 517 aa14.38□□□□□ -0.11
RFC5-209ENST00000543153 CAMTA1Q9Y6Y1 1673 aa14.38□□□□□ -0.11
RFC5-209ENST00000543153 EVC2Q86UK5 1308 aa14.38□□□□□ -0.11
RFC5-209ENST00000543153 TNS1Q9HBL0 1735 aaKnown RBP14.38□□□□□ -0.11
RFC5-209ENST00000543153 ROCK2O75116 1388 aaKnown RBP14.37□□□□□ -0.11
RFC5-209ENST00000543153 NR1H3Q13133 447 aa14.37□□□□□ -0.11
RFC5-209ENST00000543153 NEUROD1Q13562 356 aa14.37□□□□□ -0.11
RFC5-209ENST00000543153 L3MBTL2Q969R5 705 aa14.37□□□□□ -0.11
RFC5-209ENST00000543153 USP6P35125 1406 aa14.37□□□□□ -0.11
RFC5-209ENST00000543153 BRD4O60885 1362 aaPredicted RBP14.36□□□□□ -0.11
RFC5-209ENST00000543153 SOX11P35716 441 aa14.36□□□□□ -0.11
RFC5-209ENST00000543153 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
RFC5-209ENST00000543153 THRAP3Q9Y2W1 955 aaKnown RBP14.36□□□□□ -0.11
RFC5-209ENST00000543153 COL5A2P05997 1499 aaPredicted RBP14.36□□□□□ -0.11
RFC5-209ENST00000543153 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
RFC5-209ENST00000543153 TOM1L2Q6ZVM7 507 aa14.35□□□□□ -0.11
RFC5-209ENST00000543153 CALR3Q96L12 384 aaKnown RBP14.35□□□□□ -0.11
RFC5-209ENST00000543153 LMO7Q8WWI1 1683 aa14.35□□□□□ -0.11
RFC5-209ENST00000543153 CRB1P82279 1406 aa14.34□□□□□ -0.11
RFC5-209ENST00000543153 POM121CA8CG34 1229 aa14.34□□□□□ -0.11
RFC5-209ENST00000543153 ZNF592Q92610 1267 aa14.34□□□□□ -0.11
RFC5-209ENST00000543153 CAMKK2Q96RR4 588 aa14.34□□□□□ -0.11
RFC5-209ENST00000543153 FBXO45P0C2W1 286 aa14.33□□□□□ -0.12
RFC5-209ENST00000543153 CSB-PGBD3P0DP91 1061 aa14.33□□□□□ -0.12
RFC5-209ENST00000543153 BAP1Q92560 729 aa14.33□□□□□ -0.12
RFC5-209ENST00000543153 SIN3AQ96ST3 1273 aa14.33□□□□□ -0.12
RFC5-209ENST00000543153 PLSCR2Q9NRY7 297 aa14.33□□□□□ -0.12
RFC5-209ENST00000543153 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 AGERQ15109 404 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 CCDC97Q96F63 343 aaPredicted RBP14.32□□□□□ -0.12
RFC5-209ENST00000543153 ARHGAP9Q9BRR9 750 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 PLA2G2EQ9NZK7 142 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 AATKQ6ZMQ8 1374 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
RFC5-209ENST00000543153 C11orf95C9JLR9 678 aaPredicted RBP14.31□□□□□ -0.12
RFC5-209ENST00000543153 DDB1Q16531 1140 aa14.31□□□□□ -0.12
RFC5-209ENST00000543153 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
RFC5-209ENST00000543153 BPHLQ86WA6 291 aaPredicted RBP14.31□□□□□ -0.12
RFC5-209ENST00000543153 GLMNQ92990 594 aa14.31□□□□□ -0.12
RFC5-209ENST00000543153 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
RFC5-209ENST00000543153 SERPINA10Q9UK55 444 aa14.31□□□□□ -0.12
RFC5-209ENST00000543153 SLIT3O75094 1523 aa14.31□□□□□ -0.12
RFC5-209ENST00000543153 TRPM1Q7Z4N2 1603 aa14.3□□□□□ -0.12
RFC5-209ENST00000543153 ZBTB33Q86T24 672 aa14.3□□□□□ -0.12
RFC5-209ENST00000543153 ZNF511Q8NB15 262 aa14.3□□□□□ -0.12
RFC5-209ENST00000543153 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
RFC5-209ENST00000543153 CPSF1Q10570 1443 aaKnown RBP14.3□□□□□ -0.12
RFC5-209ENST00000543153 RPIAP49247 311 aa14.29□□□□□ -0.12
RFC5-209ENST00000543153 LINC01559Q495D7 138 aa14.29□□□□□ -0.12
RFC5-209ENST00000543153 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
RFC5-209ENST00000543153 TTC21BQ7Z4L5 1316 aa14.29□□□□□ -0.12
RFC5-209ENST00000543153 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
RFC5-209ENST00000543153 CD2BP2O95400 341 aaKnown RBP14.28□□□□□ -0.12
RFC5-209ENST00000543153 TRIM32Q13049 653 aa14.28□□□□□ -0.12
RFC5-209ENST00000543153 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
RFC5-209ENST00000543153 KTN1Q86UP2 1357 aaKnown RBP14.28□□□□□ -0.12
RFC5-209ENST00000543153 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
RFC5-209ENST00000543153 PARP4Q9UKK3 1724 aaKnown RBP14.28□□□□□ -0.12
RFC5-209ENST00000543153 TTC21AQ8NDW8 1320 aa14.27□□□□□ -0.12
RFC5-209ENST00000543153 MCCD1P59942 119 aaPredicted RBP14.27□□□□□ -0.13
RFC5-209ENST00000543153 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.13
RFC5-209ENST00000543153 ARID3AQ99856 593 aa14.27□□□□□ -0.13
RFC5-209ENST00000543153 LRRC37A3O60309 1634 aa14.26□□□□□ -0.13
RFC5-209ENST00000543153 PLA2G2CQ5R387 149 aa14.26□□□□□ -0.13
RFC5-209ENST00000543153 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.13
RFC5-209ENST00000543153 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
RFC5-209ENST00000543153 ALG2Q9H553 416 aa14.26□□□□□ -0.13
RFC5-209ENST00000543153 RREB1Q92766 1687 aa14.26□□□□□ -0.13
RFC5-209ENST00000543153 NUP188Q5SRE5 1749 aa14.25□□□□□ -0.13
RFC5-209ENST00000543153 MAGEB6P1A0A0J9YX57 407 aa14.25□□□□□ -0.13
RFC5-209ENST00000543153 TMC1Q8TDI8 760 aa14.25□□□□□ -0.13
RFC5-209ENST00000543153 CARD11Q9BXL7 1154 aa14.25□□□□□ -0.13
RFC5-209ENST00000543153 WNT7BP56706 349 aa14.24□□□□□ -0.13
RFC5-209ENST00000543153 SH3BP2P78314 561 aa14.24□□□□□ -0.13
RFC5-209ENST00000543153 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
RFC5-209ENST00000543153 ADAM32Q8TC27 787 aa14.24□□□□□ -0.13
RFC5-209ENST00000543153 CARD14Q9BXL6 1004 aa14.24□□□□□ -0.13
RFC5-209ENST00000543153 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
RFC5-209ENST00000543153 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
RFC5-209ENST00000543153 FOXJ1Q92949 421 aa14.23□□□□□ -0.13
RFC5-209ENST00000543153 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
RFC5-209ENST00000543153 PCDHB9Q9Y5E1 797 aa14.23□□□□□ -0.13
RFC5-209ENST00000543153 SH3RF1Q7Z6J0 888 aa14.22□□□□□ -0.13
RFC5-209ENST00000543153 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
RFC5-209ENST00000543153 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
RFC5-209ENST00000543153 EXOC5O00471 708 aa14.21□□□□□ -0.13
RFC5-209ENST00000543153 SLC19A1P41440 591 aa14.21□□□□□ -0.13
RFC5-209ENST00000543153 DZIP3Q86Y13 1208 aaKnown RBP14.21□□□□□ -0.13
RFC5-209ENST00000543153 MARCH10Q8NA82 808 aaPredicted RBP14.21□□□□□ -0.13
RFC5-209ENST00000543153 ADAMTS19Q8TE59 1207 aa14.21□□□□□ -0.13
RFC5-209ENST00000543153 OCSTAMPQ9BR26 566 aa14.21□□□□□ -0.13
RFC5-209ENST00000543153 NLRP2Q9NX02 1062 aa14.21□□□□□ -0.13
RFC5-209ENST00000543153 AKAP12Q02952 1782 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms