RNA–Protein interactions for RNA: ENST00000542766.5

IFT43-203, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-203ENST00000542766 JMYQ8N9B5 988 aa27.32■■□□□ 1.96
IFT43-203ENST00000542766 BABAM1Q9NWV8 329 aa27.32■■□□□ 1.96
IFT43-203ENST00000542766 TRIM35Q9UPQ4 493 aa27.32■■□□□ 1.96
IFT43-203ENST00000542766 TAF1P21675 1872 aa27.32■■□□□ 1.96
IFT43-203ENST00000542766 NECTIN2Q92692 538 aa27.31■■□□□ 1.96
IFT43-203ENST00000542766 RTKN2Q8IZC4 609 aa27.3■■□□□ 1.96
IFT43-203ENST00000542766 SYNE4Q8N205 404 aa27.3■■□□□ 1.96
IFT43-203ENST00000542766 HOXA10P31260 410 aaPredicted RBP27.29■■□□□ 1.96
IFT43-203ENST00000542766 LMOD3Q0VAK6 560 aa27.29■■□□□ 1.96
IFT43-203ENST00000542766 CHL1O00533 1208 aa27.28■■□□□ 1.96
IFT43-203ENST00000542766 L3MBTL3Q96JM7 780 aaPredicted RBP27.28■■□□□ 1.96
IFT43-203ENST00000542766 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
IFT43-203ENST00000542766 IARSP41252 1262 aaKnown RBP27.27■■□□□ 1.96
IFT43-203ENST00000542766 RUNDC1Q96C34 613 aa27.27■■□□□ 1.96
IFT43-203ENST00000542766 ADAMTS8Q9UP79 889 aa27.27■■□□□ 1.96
IFT43-203ENST00000542766 CHADLQ6NUI6 762 aa27.26■■□□□ 1.95
IFT43-203ENST00000542766 RPGRQ92834 1020 aaKnown RBP27.26■■□□□ 1.95
IFT43-203ENST00000542766 PARP10Q53GL7 1025 aa27.25■■□□□ 1.95
IFT43-203ENST00000542766 COPS6Q7L5N1 327 aa27.25■■□□□ 1.95
IFT43-203ENST00000542766 XAGE3Q8WTP9 111 aa27.25■■□□□ 1.95
IFT43-203ENST00000542766 PSMD1Q99460 953 aa27.25■■□□□ 1.95
IFT43-203ENST00000542766 TAF1DQ9H5J8 278 aaPredicted RBP27.25■■□□□ 1.95
IFT43-203ENST00000542766 FZD9O00144 591 aa27.24■■□□□ 1.95
IFT43-203ENST00000542766 AIMP1Q12904 312 aaKnown RBP27.24■■□□□ 1.95
IFT43-203ENST00000542766 PPP1R42Q7Z4L9 355 aa27.24■■□□□ 1.95
IFT43-203ENST00000542766 LTBP1Q14766 1721 aa27.24■■□□□ 1.95
IFT43-203ENST00000542766 TCERG1O14776 1098 aaKnown RBP27.23■■□□□ 1.95
IFT43-203ENST00000542766 WDR43Q15061 677 aaKnown RBP eCLIP27.23■■□□□ 1.95
IFT43-203ENST00000542766 CRAMP1Q96RY5 1269 aa27.23■■□□□ 1.95
IFT43-203ENST00000542766 LAS1LQ9Y4W2 734 aaKnown RBP27.23■■□□□ 1.95
IFT43-203ENST00000542766 DDX60Q8IY21 1712 aaKnown RBP27.22■■□□□ 1.95
IFT43-203ENST00000542766 PRKRIP1Q9H875 184 aaPredicted RBP27.22■■□□□ 1.95
IFT43-203ENST00000542766 IQCA1LA6NCM1 817 aa27.21■■□□□ 1.95
IFT43-203ENST00000542766 SLC10A5Q5PT55 438 aa27.21■■□□□ 1.95
IFT43-203ENST00000542766 RBM17Q96I25 401 aaKnown RBP27.21■■□□□ 1.95
IFT43-203ENST00000542766 UTP14AQ9BVJ6 771 aaKnown RBP27.21■■□□□ 1.95
IFT43-203ENST00000542766 DDX21Q9NR30 783 aaKnown RBP eCLIP27.21■■□□□ 1.95
IFT43-203ENST00000542766 PPEF1O14829 653 aaPredicted RBP27.2■■□□□ 1.94
IFT43-203ENST00000542766 CC2D2BQ6DHV5 1058 aa27.2■■□□□ 1.94
IFT43-203ENST00000542766 NLRP10Q86W26 655 aa27.2■■□□□ 1.94
IFT43-203ENST00000542766 CHPF2Q9P2E5 772 aa27.2■■□□□ 1.94
IFT43-203ENST00000542766 RNF123Q5XPI4 1314 aa27.19■■□□□ 1.94
IFT43-203ENST00000542766 ZNF428Q96B54 188 aa27.19■■□□□ 1.94
IFT43-203ENST00000542766 NLRP3Q96P20 1036 aa27.19■■□□□ 1.94
IFT43-203ENST00000542766 LDHDQ86WU2 507 aa27.18■■□□□ 1.94
IFT43-203ENST00000542766 ABCC4O15439 1325 aa27.17■■□□□ 1.94
IFT43-203ENST00000542766 PASKQ96RG2 1323 aa27.17■■□□□ 1.94
IFT43-203ENST00000542766 HCLS1P14317 486 aaPredicted RBP27.17■■□□□ 1.94
IFT43-203ENST00000542766 TCIRG1Q13488 830 aa27.17■■□□□ 1.94
IFT43-203ENST00000542766 HACL1Q9UJ83 578 aa27.17■■□□□ 1.94
IFT43-203ENST00000542766 EAPPQ56P03 285 aaPredicted RBP27.16■■□□□ 1.94
IFT43-203ENST00000542766 EPHX2P34913 555 aa27.15■■□□□ 1.94
IFT43-203ENST00000542766 HSP90AB3PQ58FF7 597 aa27.15■■□□□ 1.94
IFT43-203ENST00000542766 GPC2Q8N158 579 aa27.15■■□□□ 1.94
IFT43-203ENST00000542766 JDP2Q8WYK2 163 aa27.15■■□□□ 1.94
IFT43-203ENST00000542766 ITGBL1O95965 494 aaPredicted RBP27.14■■□□□ 1.94
IFT43-203ENST00000542766 HDGFL1Q5TGJ6 251 aa27.14■■□□□ 1.94
IFT43-203ENST00000542766 CREBZFQ9NS37 354 aa27.14■■□□□ 1.94
IFT43-203ENST00000542766 COL4A1P02462 1669 aa27.14■■□□□ 1.93
IFT43-203ENST00000542766 COL13A1Q5TAT6 717 aaPredicted RBP27.13■■□□□ 1.93
IFT43-203ENST00000542766 LARGE2Q8N3Y3 721 aa27.13■■□□□ 1.93
IFT43-203ENST00000542766 CFAP44Q96MT7 982 aa27.13■■□□□ 1.93
IFT43-203ENST00000542766 MBIPQ9NS73 344 aa27.13■■□□□ 1.93
IFT43-203ENST00000542766 ATP6V0A2Q9Y487 856 aa27.13■■□□□ 1.93
IFT43-203ENST00000542766 MKRN1Q9UHC7 482 aaKnown RBP27.12■■□□□ 1.93
IFT43-203ENST00000542766 TRMT112Q9UI30 125 aaKnown RBP27.12■■□□□ 1.93
IFT43-203ENST00000542766 GJA3Q9Y6H8 435 aa27.12■■□□□ 1.93
IFT43-203ENST00000542766 LRRC37AA6NMS7 1700 aa27.12■■□□□ 1.93
IFT43-203ENST00000542766 HOXB7P09629 217 aa27.11■■□□□ 1.93
IFT43-203ENST00000542766 ZNF853P0CG23 659 aa27.11■■□□□ 1.93
IFT43-203ENST00000542766 GRIPAP1Q4V328 841 aa27.11■■□□□ 1.93
IFT43-203ENST00000542766 DUSP27Q5VZP5 1158 aa27.11■■□□□ 1.93
IFT43-203ENST00000542766 APAF1O14727 1248 aa27.1■■□□□ 1.93
IFT43-203ENST00000542766 EIF6P56537 245 aaKnown RBP27.1■■□□□ 1.93
IFT43-203ENST00000542766 AOC3Q16853 763 aa27.1■■□□□ 1.93
IFT43-203ENST00000542766 SH3TC1Q8TE82 1336 aa27.1■■□□□ 1.93
IFT43-203ENST00000542766 DUOX1Q9NRD9 1551 aa27.09■■□□□ 1.93
IFT43-203ENST00000542766 HSPA1AP0DMV8 641 aaKnown RBP27.09■■□□□ 1.93
IFT43-203ENST00000542766 HSPA1BP0DMV9 641 aaKnown RBP27.09■■□□□ 1.93
IFT43-203ENST00000542766 SCNN1DP51172 638 aa27.09■■□□□ 1.93
IFT43-203ENST00000542766 PLBD2Q8NHP8 589 aa27.09■■□□□ 1.93
IFT43-203ENST00000542766 CLEC11AQ9Y240 323 aa27.09■■□□□ 1.93
IFT43-203ENST00000542766 PPIP5K2O43314 1243 aa27.08■■□□□ 1.93
IFT43-203ENST00000542766 MAP1SQ66K74 1059 aaPredicted RBP27.08■■□□□ 1.93
IFT43-203ENST00000542766 ANKRD13DQ6ZTN6 518 aa27.08■■□□□ 1.93
IFT43-203ENST00000542766 ISCA1Q9BUE6 129 aa27.08■■□□□ 1.93
IFT43-203ENST00000542766 DBF4Q9UBU7 674 aaPredicted RBP27.08■■□□□ 1.93
IFT43-203ENST00000542766 TRPM7Q96QT4 1865 aa27.07■■□□□ 1.92
IFT43-203ENST00000542766 ATP5J2-PTCD1G3V325 749 aa27.07■■□□□ 1.92
IFT43-203ENST00000542766 EPS15P42566 896 aa27.07■■□□□ 1.92
IFT43-203ENST00000542766 PNMA8AQ86V59 439 aaPredicted RBP27.07■■□□□ 1.92
IFT43-203ENST00000542766 SP8Q8IXZ3 490 aa27.06■■□□□ 1.92
IFT43-203ENST00000542766 NIM1KQ8IY84 436 aa27.06■■□□□ 1.92
IFT43-203ENST00000542766 RTFDC1Q9BY42 306 aaPredicted RBP27.06■■□□□ 1.92
IFT43-203ENST00000542766 CNTNAP1P78357 1384 aa27.06■■□□□ 1.92
IFT43-203ENST00000542766 BBOX1O75936 387 aa27.05■■□□□ 1.92
IFT43-203ENST00000542766 CNTROBQ8N137 903 aa27.05■■□□□ 1.92
IFT43-203ENST00000542766 FAM89AQ96GI7 184 aa27.05■■□□□ 1.92
IFT43-203ENST00000542766 GRAPQ13588 217 aa27.04■■□□□ 1.92
IFT43-203ENST00000542766 CCDC184Q52MB2 194 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms