RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 RPGRQ92834 1020 aaKnown RBP23.63■■□□□ 1.37
PTPN6-216ENST00000542277 TSPYL4Q9UJ04 414 aa23.63■■□□□ 1.37
PTPN6-216ENST00000542277 DICER1Q9UPY3 1922 aaKnown RBP23.63■■□□□ 1.37
PTPN6-216ENST00000542277 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
PTPN6-216ENST00000542277 JDP2Q8WYK2 163 aa23.62■■□□□ 1.37
PTPN6-216ENST00000542277 RNF123Q5XPI4 1314 aa23.61■■□□□ 1.37
PTPN6-216ENST00000542277 NTSR2O95665 410 aa23.61■■□□□ 1.37
PTPN6-216ENST00000542277 GPC2Q8N158 579 aa23.61■■□□□ 1.37
PTPN6-216ENST00000542277 RBM17Q96I25 401 aaKnown RBP23.61■■□□□ 1.37
PTPN6-216ENST00000542277 CRAMP1Q96RY5 1269 aa23.61■■□□□ 1.37
PTPN6-216ENST00000542277 TMEM88BA6NKF7 163 aa23.6■■□□□ 1.37
PTPN6-216ENST00000542277 ANXA1P04083 346 aa23.6■■□□□ 1.37
PTPN6-216ENST00000542277 PROSER3Q2NL68 480 aa23.6■■□□□ 1.37
PTPN6-216ENST00000542277 MAP1SQ66K74 1059 aaPredicted RBP23.6■■□□□ 1.37
PTPN6-216ENST00000542277 CNTROBQ8N137 903 aa23.6■■□□□ 1.37
PTPN6-216ENST00000542277 GJA3Q9Y6H8 435 aa23.6■■□□□ 1.37
PTPN6-216ENST00000542277 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
PTPN6-216ENST00000542277 SLC10A5Q5PT55 438 aa23.59■■□□□ 1.37
PTPN6-216ENST00000542277 PNMA8AQ86V59 439 aaPredicted RBP23.59■■□□□ 1.37
PTPN6-216ENST00000542277 ERBB4Q15303 1308 aa23.59■■□□□ 1.37
PTPN6-216ENST00000542277 VEGFBP49765 207 aa23.58■■□□□ 1.37
PTPN6-216ENST00000542277 EIF6P56537 245 aaKnown RBP23.58■■□□□ 1.37
PTPN6-216ENST00000542277 PPP1R42Q7Z4L9 355 aa23.58■■□□□ 1.37
PTPN6-216ENST00000542277 NLRP3Q96P20 1036 aa23.58■■□□□ 1.37
PTPN6-216ENST00000542277 CNTNAP1P78357 1384 aa23.57■■□□□ 1.36
PTPN6-216ENST00000542277 TMPOP42166 694 aaKnown RBP23.57■■□□□ 1.36
PTPN6-216ENST00000542277 LARGE2Q8N3Y3 721 aa23.57■■□□□ 1.36
PTPN6-216ENST00000542277 UTP14AQ9BVJ6 771 aaKnown RBP23.57■■□□□ 1.36
PTPN6-216ENST00000542277 PPEF1O14829 653 aaPredicted RBP23.56■■□□□ 1.36
PTPN6-216ENST00000542277 GRIPAP1Q4V328 841 aa23.56■■□□□ 1.36
PTPN6-216ENST00000542277 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
PTPN6-216ENST00000542277 NECTIN2Q92692 538 aa23.56■■□□□ 1.36
PTPN6-216ENST00000542277 FOXN1O15353 648 aa23.55■■□□□ 1.36
PTPN6-216ENST00000542277 EPS15P42566 896 aa23.55■■□□□ 1.36
PTPN6-216ENST00000542277 COPS6Q7L5N1 327 aa23.55■■□□□ 1.36
PTPN6-216ENST00000542277 BABAM1Q9NWV8 329 aa23.55■■□□□ 1.36
PTPN6-216ENST00000542277 IBTKQ9P2D0 1353 aaPredicted RBP23.54■■□□□ 1.36
PTPN6-216ENST00000542277 CACNA1SQ13698 1873 aa23.54■■□□□ 1.36
PTPN6-216ENST00000542277 AIMP1Q12904 312 aaKnown RBP23.54■■□□□ 1.36
PTPN6-216ENST00000542277 RALBP1Q15311 655 aa23.54■■□□□ 1.36
PTPN6-216ENST00000542277 ARFGEF2Q9Y6D5 1785 aa23.53■■□□□ 1.36
PTPN6-216ENST00000542277 SCNN1DP51172 638 aa23.52■■□□□ 1.36
PTPN6-216ENST00000542277 NEUROD2Q15784 382 aa23.52■■□□□ 1.36
PTPN6-216ENST00000542277 KRT24Q2M2I5 525 aa23.52■■□□□ 1.36
PTPN6-216ENST00000542277 DEFB115Q30KQ5 88 aa23.52■■□□□ 1.36
PTPN6-216ENST00000542277 XAGE3Q8WTP9 111 aa23.52■■□□□ 1.36
PTPN6-216ENST00000542277 ATP6V0A2Q9Y487 856 aa23.52■■□□□ 1.36
PTPN6-216ENST00000542277 RIC1Q4ADV7 1423 aa23.51■■□□□ 1.35
PTPN6-216ENST00000542277 HCLS1P14317 486 aaPredicted RBP23.51■■□□□ 1.35
PTPN6-216ENST00000542277 FMR1Q06787 632 aaKnown RBP eCLIP23.51■■□□□ 1.35
PTPN6-216ENST00000542277 COL4A5P29400 1685 aa23.51■■□□□ 1.35
PTPN6-216ENST00000542277 PPIP5K2O43314 1243 aa23.5■■□□□ 1.35
PTPN6-216ENST00000542277 LMOD1P29536 600 aaPredicted RBP23.5■■□□□ 1.35
PTPN6-216ENST00000542277 AOC3Q16853 763 aa23.5■■□□□ 1.35
PTPN6-216ENST00000542277 NLRP10Q86W26 655 aa23.5■■□□□ 1.35
PTPN6-216ENST00000542277 CCDC146Q8IYE0 955 aa23.5■■□□□ 1.35
PTPN6-216ENST00000542277 CHL1O00533 1208 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 BBOX1O75936 387 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 TCIRG1Q13488 830 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 NIM1KQ8IY84 436 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 ZNF428Q96B54 188 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 TMX4Q9H1E5 349 aaPredicted RBP23.49■■□□□ 1.35
PTPN6-216ENST00000542277 DDX21Q9NR30 783 aaKnown RBP eCLIP23.49■■□□□ 1.35
PTPN6-216ENST00000542277 WBP1LQ9NX94 342 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 ABCC4O15439 1325 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 KDM3BQ7LBC6 1761 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 SCN4AP35499 1836 aa23.49■■□□□ 1.35
PTPN6-216ENST00000542277 RASSF10A6NK89 507 aa23.48■■□□□ 1.35
PTPN6-216ENST00000542277 LMOD3Q0VAK6 560 aa23.48■■□□□ 1.35
PTPN6-216ENST00000542277 DDX10Q13206 875 aaKnown RBP23.48■■□□□ 1.35
PTPN6-216ENST00000542277 LAS1LQ9Y4W2 734 aaKnown RBP23.48■■□□□ 1.35
PTPN6-216ENST00000542277 NUP98P52948 1817 aa23.47■■□□□ 1.35
PTPN6-216ENST00000542277 DLG5Q8TDM6 1919 aa23.47■■□□□ 1.35
PTPN6-216ENST00000542277 CXCL9Q07325 125 aa23.47■■□□□ 1.35
PTPN6-216ENST00000542277 SP8Q8IXZ3 490 aa23.47■■□□□ 1.35
PTPN6-216ENST00000542277 RTFDC1Q9BY42 306 aaPredicted RBP23.47■■□□□ 1.35
PTPN6-216ENST00000542277 VPS33BQ9H267 617 aa23.47■■□□□ 1.35
PTPN6-216ENST00000542277 TRMT112Q9UI30 125 aaKnown RBP23.47■■□□□ 1.35
PTPN6-216ENST00000542277 TRIM35Q9UPQ4 493 aa23.47■■□□□ 1.35
PTPN6-216ENST00000542277 HSP90AB3PQ58FF7 597 aa23.46■■□□□ 1.35
PTPN6-216ENST00000542277 USP50Q70EL3 339 aaPredicted RBP23.46■■□□□ 1.35
PTPN6-216ENST00000542277 ZNRF3Q9ULT6 936 aa23.46■■□□□ 1.35
PTPN6-216ENST00000542277 ABT1Q9ULW3 272 aaKnown RBP23.46■■□□□ 1.35
PTPN6-216ENST00000542277 CTCFP49711 727 aaPredicted RBP23.45■■□□□ 1.34
PTPN6-216ENST00000542277 MPNDQ8N594 471 aa23.45■■□□□ 1.34
PTPN6-216ENST00000542277 PRDM10Q9NQV6 1147 aa23.45■■□□□ 1.34
PTPN6-216ENST00000542277 WDR33Q9C0J8 1336 aaKnown RBP23.44■■□□□ 1.34
PTPN6-216ENST00000542277 TRAF5O00463 557 aa23.44■■□□□ 1.34
PTPN6-216ENST00000542277 CST9Q5W186 159 aa23.44■■□□□ 1.34
PTPN6-216ENST00000542277 DPP8Q6V1X1 898 aaPredicted RBP23.44■■□□□ 1.34
PTPN6-216ENST00000542277 AIDAQ96BJ3 306 aa23.44■■□□□ 1.34
PTPN6-216ENST00000542277 LAMB4A4D0S4 1761 aa23.44■■□□□ 1.34
PTPN6-216ENST00000542277 DDX46Q7L014 1031 aaKnown RBP23.43■■□□□ 1.34
PTPN6-216ENST00000542277 SUPT20HQ8NEM7 779 aa23.43■■□□□ 1.34
PTPN6-216ENST00000542277 GPRC5DQ9NZD1 345 aa23.43■■□□□ 1.34
PTPN6-216ENST00000542277 CHPF2Q9P2E5 772 aa23.43■■□□□ 1.34
PTPN6-216ENST00000542277 SH3TC1Q8TE82 1336 aa23.42■■□□□ 1.34
PTPN6-216ENST00000542277 LBX1P52954 281 aa23.42■■□□□ 1.34
PTPN6-216ENST00000542277 RUNDC1Q96C34 613 aa23.42■■□□□ 1.34
PTPN6-216ENST00000542277 ADAMTS8Q9UP79 889 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms