RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ALDH1B1P30837 517 aa26.09■■□□□ 1.77
DDX11-220ENST00000542244 AIMP1Q12904 312 aaKnown RBP26.09■■□□□ 1.77
DDX11-220ENST00000542244 JMYQ8N9B5 988 aa26.09■■□□□ 1.77
DDX11-220ENST00000542244 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
DDX11-220ENST00000542244 IBTKQ9P2D0 1353 aaPredicted RBP26.08■■□□□ 1.77
DDX11-220ENST00000542244 HOXA10P31260 410 aaPredicted RBP26.08■■□□□ 1.77
DDX11-220ENST00000542244 COPS6Q7L5N1 327 aa26.08■■□□□ 1.77
DDX11-220ENST00000542244 XAGE3Q8WTP9 111 aa26.08■■□□□ 1.77
DDX11-220ENST00000542244 RUNDC1Q96C34 613 aa26.08■■□□□ 1.77
DDX11-220ENST00000542244 IARSP41252 1262 aaKnown RBP26.07■■□□□ 1.76
DDX11-220ENST00000542244 RTKN2Q8IZC4 609 aa26.07■■□□□ 1.76
DDX11-220ENST00000542244 BABAM1Q9NWV8 329 aa26.07■■□□□ 1.76
DDX11-220ENST00000542244 RIC1Q4ADV7 1423 aa26.06■■□□□ 1.76
DDX11-220ENST00000542244 LMOD3Q0VAK6 560 aa26.06■■□□□ 1.76
DDX11-220ENST00000542244 RPGRQ92834 1020 aaKnown RBP26.06■■□□□ 1.76
DDX11-220ENST00000542244 L3MBTL3Q96JM7 780 aaPredicted RBP26.06■■□□□ 1.76
DDX11-220ENST00000542244 CHADLQ6NUI6 762 aa26.05■■□□□ 1.76
DDX11-220ENST00000542244 TAF1DQ9H5J8 278 aaPredicted RBP26.05■■□□□ 1.76
DDX11-220ENST00000542244 FZD9O00144 591 aa26.04■■□□□ 1.76
DDX11-220ENST00000542244 WDR43Q15061 677 aaKnown RBP eCLIP26.04■■□□□ 1.76
DDX11-220ENST00000542244 PRKRIP1Q9H875 184 aaPredicted RBP26.04■■□□□ 1.76
DDX11-220ENST00000542244 CHPF2Q9P2E5 772 aa26.03■■□□□ 1.76
DDX11-220ENST00000542244 HCLS1P14317 486 aaPredicted RBP26.02■■□□□ 1.76
DDX11-220ENST00000542244 PARP10Q53GL7 1025 aa26.02■■□□□ 1.76
DDX11-220ENST00000542244 PPP1R42Q7Z4L9 355 aa26.02■■□□□ 1.76
DDX11-220ENST00000542244 NLRP10Q86W26 655 aa26.02■■□□□ 1.76
DDX11-220ENST00000542244 CRAMP1Q96RY5 1269 aa26.02■■□□□ 1.76
DDX11-220ENST00000542244 PSMD1Q99460 953 aa26.02■■□□□ 1.76
DDX11-220ENST00000542244 UTP14AQ9BVJ6 771 aaKnown RBP26.02■■□□□ 1.76
DDX11-220ENST00000542244 PPEF1O14829 653 aaPredicted RBP26.01■■□□□ 1.75
DDX11-220ENST00000542244 SLC10A5Q5PT55 438 aa26.01■■□□□ 1.75
DDX11-220ENST00000542244 RNF123Q5XPI4 1314 aa26.01■■□□□ 1.75
DDX11-220ENST00000542244 RBM17Q96I25 401 aaKnown RBP26.01■■□□□ 1.75
DDX11-220ENST00000542244 DDX21Q9NR30 783 aaKnown RBP eCLIP26.01■■□□□ 1.75
DDX11-220ENST00000542244 ABCC4O15439 1325 aa25.98■■□□□ 1.75
DDX11-220ENST00000542244 TCIRG1Q13488 830 aa25.98■■□□□ 1.75
DDX11-220ENST00000542244 EAPPQ56P03 285 aaPredicted RBP25.98■■□□□ 1.75
DDX11-220ENST00000542244 NLRP3Q96P20 1036 aa25.98■■□□□ 1.75
DDX11-220ENST00000542244 LAMB2P55268 1798 aa25.97■■□□□ 1.75
DDX11-220ENST00000542244 ANKRD36CQ5JPF3 1778 aa25.97■■□□□ 1.75
DDX11-220ENST00000542244 LTBP1Q14766 1721 aa25.97■■□□□ 1.75
DDX11-220ENST00000542244 COL13A1Q5TAT6 717 aaPredicted RBP25.97■■□□□ 1.75
DDX11-220ENST00000542244 MBIPQ9NS73 344 aa25.97■■□□□ 1.75
DDX11-220ENST00000542244 SCN4AP35499 1836 aa25.97■■□□□ 1.75
DDX11-220ENST00000542244 PASKQ96RG2 1323 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 IQCA1LA6NCM1 817 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 APAF1O14727 1248 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 EPHX2P34913 555 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 CCDC184Q52MB2 194 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 HDGFL1Q5TGJ6 251 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 LDHDQ86WU2 507 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 HACL1Q9UJ83 578 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 ADAMTSL1Q8N6G6 1762 aa25.96■■□□□ 1.75
DDX11-220ENST00000542244 PCNTO95613 3336 aa25.95■■□□□ 1.75
DDX11-220ENST00000542244 ITGBL1O95965 494 aaPredicted RBP25.95■■□□□ 1.74
DDX11-220ENST00000542244 CC2D2BQ6DHV5 1058 aa25.95■■□□□ 1.74
DDX11-220ENST00000542244 MKRN1Q9UHC7 482 aaKnown RBP25.95■■□□□ 1.74
DDX11-220ENST00000542244 GJA3Q9Y6H8 435 aa25.95■■□□□ 1.74
DDX11-220ENST00000542244 COL4A1P02462 1669 aa25.94■■□□□ 1.74
DDX11-220ENST00000542244 ZNF853P0CG23 659 aa25.94■■□□□ 1.74
DDX11-220ENST00000542244 DUSP27Q5VZP5 1158 aa25.94■■□□□ 1.74
DDX11-220ENST00000542244 LARGE2Q8N3Y3 721 aa25.94■■□□□ 1.74
DDX11-220ENST00000542244 TRMT112Q9UI30 125 aaKnown RBP25.94■■□□□ 1.74
DDX11-220ENST00000542244 ATP6V0A2Q9Y487 856 aa25.94■■□□□ 1.74
DDX11-220ENST00000542244 ATP5J2-PTCD1G3V325 749 aa25.93■■□□□ 1.74
DDX11-220ENST00000542244 AOC3Q16853 763 aa25.93■■□□□ 1.74
DDX11-220ENST00000542244 GPC2Q8N158 579 aa25.93■■□□□ 1.74
DDX11-220ENST00000542244 JDP2Q8WYK2 163 aa25.93■■□□□ 1.74
DDX11-220ENST00000542244 CFAP44Q96MT7 982 aa25.93■■□□□ 1.74
DDX11-220ENST00000542244 TAF1P21675 1872 aa25.93■■□□□ 1.74
DDX11-220ENST00000542244 MAP1SQ66K74 1059 aaPredicted RBP25.92■■□□□ 1.74
DDX11-220ENST00000542244 CREBZFQ9NS37 354 aa25.92■■□□□ 1.74
DDX11-220ENST00000542244 CLEC11AQ9Y240 323 aa25.92■■□□□ 1.74
DDX11-220ENST00000542244 EPS15P42566 896 aa25.91■■□□□ 1.74
DDX11-220ENST00000542244 SCNN1DP51172 638 aa25.91■■□□□ 1.74
DDX11-220ENST00000542244 FMR1Q06787 632 aaKnown RBP eCLIP25.91■■□□□ 1.74
DDX11-220ENST00000542244 HSP90AB3PQ58FF7 597 aa25.91■■□□□ 1.74
DDX11-220ENST00000542244 ISCA1Q9BUE6 129 aa25.91■■□□□ 1.74
DDX11-220ENST00000542244 ELL2O00472 640 aaPredicted RBP25.9■■□□□ 1.74
DDX11-220ENST00000542244 HSPA1AP0DMV8 641 aaKnown RBP25.9■■□□□ 1.74
DDX11-220ENST00000542244 HSPA1BP0DMV9 641 aaKnown RBP25.9■■□□□ 1.74
DDX11-220ENST00000542244 PLBD2Q8NHP8 589 aa25.9■■□□□ 1.74
DDX11-220ENST00000542244 SH3TC1Q8TE82 1336 aa25.89■■□□□ 1.74
DDX11-220ENST00000542244 PPIP5K2O43314 1243 aa25.89■■□□□ 1.74
DDX11-220ENST00000542244 EIF6P56537 245 aaKnown RBP25.89■■□□□ 1.74
DDX11-220ENST00000542244 RTL5Q5HYW3 569 aaPredicted RBP25.89■■□□□ 1.74
DDX11-220ENST00000542244 ANKRD13DQ6ZTN6 518 aa25.89■■□□□ 1.74
DDX11-220ENST00000542244 FAM89AQ96GI7 184 aa25.89■■□□□ 1.74
DDX11-220ENST00000542244 PHAXQ9H814 394 aaKnown RBP25.88■■□□□ 1.73
DDX11-220ENST00000542244 DBF4Q9UBU7 674 aaPredicted RBP25.88■■□□□ 1.73
DDX11-220ENST00000542244 DDX60Q8IY21 1712 aaKnown RBP25.88■■□□□ 1.73
DDX11-220ENST00000542244 HOXB7P09629 217 aa25.87■■□□□ 1.73
DDX11-220ENST00000542244 C8orf58Q8NAV2 365 aa25.87■■□□□ 1.73
DDX11-220ENST00000542244 SP8Q8IXZ3 490 aa25.86■■□□□ 1.73
DDX11-220ENST00000542244 NIM1KQ8IY84 436 aa25.86■■□□□ 1.73
DDX11-220ENST00000542244 CNTROBQ8N137 903 aa25.86■■□□□ 1.73
DDX11-220ENST00000542244 RTFDC1Q9BY42 306 aaPredicted RBP25.86■■□□□ 1.73
DDX11-220ENST00000542244 DUOX1Q9NRD9 1551 aa25.86■■□□□ 1.73
DDX11-220ENST00000542244 BBOX1O75936 387 aa25.85■■□□□ 1.73
DDX11-220ENST00000542244 GRAPQ13588 217 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms