RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 KIF24Q5T7B8 1368 aa17.99■□□□□ 0.47
VARS2-211ENST00000541562 POLA2Q14181 598 aa17.99■□□□□ 0.47
VARS2-211ENST00000541562 CREB3L3Q68CJ9 461 aa17.99■□□□□ 0.47
VARS2-211ENST00000541562 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
VARS2-211ENST00000541562 DIP2AQ14689 1571 aa17.99■□□□□ 0.47
VARS2-211ENST00000541562 LMBR1LQ6UX01 489 aa17.99■□□□□ 0.47
VARS2-211ENST00000541562 GPATCH3Q96I76 525 aa17.99■□□□□ 0.47
VARS2-211ENST00000541562 FTOQ9C0B1 505 aaKnown RBP eCLIP17.99■□□□□ 0.47
VARS2-211ENST00000541562 AGLP35573 1532 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
VARS2-211ENST00000541562 TCHHQ07283 1943 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 GOLIM4O00461 696 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
VARS2-211ENST00000541562 ZSCAN22P10073 491 aaPredicted RBP17.98■□□□□ 0.47
VARS2-211ENST00000541562 CABP4P57796 275 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 FKBP4Q02790 459 aaKnown RBP eCLIP17.98■□□□□ 0.47
VARS2-211ENST00000541562 TTLL7Q6ZT98 887 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 ANKRD13DQ6ZTN6 518 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 SYNE4Q8N205 404 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
VARS2-211ENST00000541562 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
VARS2-211ENST00000541562 DDX58O95786 925 aaKnown RBP17.97■□□□□ 0.47
VARS2-211ENST00000541562 CHMP4CQ96CF2 233 aa17.97■□□□□ 0.47
VARS2-211ENST00000541562 VSIG10Q8N0Z9 540 aa17.97■□□□□ 0.47
VARS2-211ENST00000541562 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
VARS2-211ENST00000541562 NRKQ7Z2Y5 1582 aa17.97■□□□□ 0.47
VARS2-211ENST00000541562 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
VARS2-211ENST00000541562 ATF3P18847 181 aa17.96■□□□□ 0.47
VARS2-211ENST00000541562 ZNF445P59923 1031 aa17.96■□□□□ 0.47
VARS2-211ENST00000541562 VPS53Q5VIR6 699 aa17.96■□□□□ 0.47
VARS2-211ENST00000541562 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
VARS2-211ENST00000541562 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
VARS2-211ENST00000541562 GPTP24298 496 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 CUL4AQ13619 759 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 RUFY2Q8WXA3 655 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 UBR1Q8IWV7 1749 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 BLOC1S2Q6QNY1 142 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 GPHNQ9NQX3 736 aaPredicted RBP17.95■□□□□ 0.46
VARS2-211ENST00000541562 F13A1P00488 732 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 PTMSP20962 102 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 OTUD7BQ6GQQ9 843 aa17.95■□□□□ 0.46
VARS2-211ENST00000541562 SLC27A2O14975 620 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 DRC7Q8IY82 874 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 LINS1Q8NG48 757 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 DBNLQ9UJU6 430 aaKnown RBP17.94■□□□□ 0.46
VARS2-211ENST00000541562 ADCY5O95622 1261 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 ST3GAL1Q11201 340 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 PI16Q6UXB8 463 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 NEURL1BA8MQ27 555 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 MCM2P49736 904 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 TTLL5Q6EMB2 1281 aa17.94■□□□□ 0.46
VARS2-211ENST00000541562 PUS3Q9BZE2 481 aaKnown RBP17.94■□□□□ 0.46
VARS2-211ENST00000541562 CCDC171Q6TFL3 1326 aa17.93■□□□□ 0.46
VARS2-211ENST00000541562 LIG1P18858 919 aa17.93■□□□□ 0.46
VARS2-211ENST00000541562 PDIA6Q15084 440 aa17.93■□□□□ 0.46
VARS2-211ENST00000541562 BRF1Q92994 677 aa17.93■□□□□ 0.46
VARS2-211ENST00000541562 GCKRQ14397 625 aa17.93■□□□□ 0.46
VARS2-211ENST00000541562 BICD2Q8TD16 824 aa17.93■□□□□ 0.46
VARS2-211ENST00000541562 DDX21Q9NR30 783 aaKnown RBP eCLIP17.93■□□□□ 0.46
VARS2-211ENST00000541562 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.93■□□□□ 0.46
VARS2-211ENST00000541562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.93■□□□□ 0.46
VARS2-211ENST00000541562 RPAP1Q9BWH6 1393 aaPredicted RBP17.93■□□□□ 0.46
VARS2-211ENST00000541562 CYP27B1O15528 508 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 LRRC24Q50LG9 513 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 GORABQ5T7V8 394 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 GJB4Q9NTQ9 266 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.92■□□□□ 0.46
VARS2-211ENST00000541562 MBD3O95983 291 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 TTC14Q96N46 770 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 PIK3C2AO00443 1686 aa17.92■□□□□ 0.46
VARS2-211ENST00000541562 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 H3BQV1 296 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 LUZP1Q86V48 1076 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 SNAP23O00161 211 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
VARS2-211ENST00000541562 RXRAP19793 462 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 ANAPC15P60006 121 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 ISM2Q6H9L7 571 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 Q6ZUG5 572 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 SYAP1Q96A49 352 aaPredicted RBP17.9■□□□□ 0.46
VARS2-211ENST00000541562 UQCRHLA0A096LP55 91 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 UQCRHP07919 91 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 APOBRQ0VD83 1088 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 PPP1R9BQ96SB3 815 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 SLC52A2Q9HAB3 445 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
VARS2-211ENST00000541562 FAM89AQ96GI7 184 aa17.89■□□□□ 0.45
VARS2-211ENST00000541562 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.45
VARS2-211ENST00000541562 PHKG2P15735 406 aa17.88■□□□□ 0.45
VARS2-211ENST00000541562 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
VARS2-211ENST00000541562 DACT1Q9NYF0 836 aa17.88■□□□□ 0.45
VARS2-211ENST00000541562 ERBB3P21860 1342 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms