RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 GPTP24298 496 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 EPHX2P34913 555 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 PARP10Q53GL7 1025 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 PPP1R42Q7Z4L9 355 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 TNS4Q8IZW8 715 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 DLG5Q8TDM6 1919 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 RBM17Q96I25 401 aaKnown RBP15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 CRAMP1Q96RY5 1269 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 TSPYL4Q9UJ04 414 aa15.81■□□□□ 0.12
CBX3P4-202ENST00000540428 CNTNAP1P78357 1384 aa15.8■□□□□ 0.12
CBX3P4-202ENST00000540428 NTSR2O95665 410 aa15.8■□□□□ 0.12
CBX3P4-202ENST00000540428 ITGBL1O95965 494 aaPredicted RBP15.8■□□□□ 0.12
CBX3P4-202ENST00000540428 RALBP1Q15311 655 aa15.8■□□□□ 0.12
CBX3P4-202ENST00000540428 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
CBX3P4-202ENST00000540428 MKRN1Q9UHC7 482 aaKnown RBP15.8■□□□□ 0.12
CBX3P4-202ENST00000540428 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
CBX3P4-202ENST00000540428 TMEM88BA6NKF7 163 aa15.79■□□□□ 0.12
CBX3P4-202ENST00000540428 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
CBX3P4-202ENST00000540428 LRP10Q7Z4F1 713 aa15.79■□□□□ 0.12
CBX3P4-202ENST00000540428 NUP98P52948 1817 aa15.78■□□□□ 0.12
CBX3P4-202ENST00000540428 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
CBX3P4-202ENST00000540428 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
CBX3P4-202ENST00000540428 RIPK4P57078 832 aa15.78■□□□□ 0.12
CBX3P4-202ENST00000540428 PDIA6Q15084 440 aa15.78■□□□□ 0.12
CBX3P4-202ENST00000540428 NLRP3Q96P20 1036 aa15.78■□□□□ 0.12
CBX3P4-202ENST00000540428 PCNTO95613 3336 aa15.77■□□□□ 0.12
CBX3P4-202ENST00000540428 SLC10A5Q5PT55 438 aa15.77■□□□□ 0.12
CBX3P4-202ENST00000540428 VPS33BQ9H267 617 aa15.77■□□□□ 0.12
CBX3P4-202ENST00000540428 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
CBX3P4-202ENST00000540428 ADAMTSL1Q8N6G6 1762 aa15.77■□□□□ 0.11
CBX3P4-202ENST00000540428 TMPOP42166 694 aaKnown RBP15.76■□□□□ 0.11
CBX3P4-202ENST00000540428 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
CBX3P4-202ENST00000540428 LARGE2Q8N3Y3 721 aa15.76■□□□□ 0.11
CBX3P4-202ENST00000540428 UTP14AQ9BVJ6 771 aaKnown RBP15.76■□□□□ 0.11
CBX3P4-202ENST00000540428 TMX4Q9H1E5 349 aaPredicted RBP15.76■□□□□ 0.11
CBX3P4-202ENST00000540428 EIF2S2P20042 333 aaKnown RBP15.75■□□□□ 0.11
CBX3P4-202ENST00000540428 LMOD1P29536 600 aaPredicted RBP15.75■□□□□ 0.11
CBX3P4-202ENST00000540428 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
CBX3P4-202ENST00000540428 C3orf67Q6ZVT6 689 aa15.75■□□□□ 0.11
CBX3P4-202ENST00000540428 MAP1SQ66K74 1059 aaPredicted RBP15.74■□□□□ 0.11
CBX3P4-202ENST00000540428 ATP6V0A2Q9Y487 856 aa15.74■□□□□ 0.11
CBX3P4-202ENST00000540428 GJA3Q9Y6H8 435 aa15.74■□□□□ 0.11
CBX3P4-202ENST00000540428 COL4A5P29400 1685 aa15.73■□□□□ 0.11
CBX3P4-202ENST00000540428 RASSF10A6NK89 507 aa15.73■□□□□ 0.11
CBX3P4-202ENST00000540428 VEGFBP49765 207 aa15.73■□□□□ 0.11
CBX3P4-202ENST00000540428 SCNN1DP51172 638 aa15.73■□□□□ 0.11
CBX3P4-202ENST00000540428 PROSER3Q2NL68 480 aa15.73■□□□□ 0.11
CBX3P4-202ENST00000540428 NIM1KQ8IY84 436 aa15.73■□□□□ 0.11
CBX3P4-202ENST00000540428 SUPT20HQ8NEM7 779 aa15.73■□□□□ 0.11
CBX3P4-202ENST00000540428 PPIP5K2O43314 1243 aa15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 BBOX1O75936 387 aa15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 ANXA1P04083 346 aa15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 USP50Q70EL3 339 aaPredicted RBP15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 COPS6Q7L5N1 327 aa15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 PRDM10Q9NQV6 1147 aa15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 DDX21Q9NR30 783 aaKnown RBP eCLIP15.72■□□□□ 0.11
CBX3P4-202ENST00000540428 ABCC4O15439 1325 aa15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 MYBBP1AQ9BQG0 1328 aaKnown RBP15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 CHL1O00533 1208 aa15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 TCERG1O14776 1098 aaKnown RBP15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 FOXN1O15353 648 aa15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 TCIRG1Q13488 830 aa15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 XAGE3Q8WTP9 111 aa15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 AIDAQ96BJ3 306 aa15.71■□□□□ 0.11
CBX3P4-202ENST00000540428 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
CBX3P4-202ENST00000540428 CAPN15O75808 1086 aa15.7■□□□□ 0.1
CBX3P4-202ENST00000540428 HOXB7P09629 217 aa15.7■□□□□ 0.1
CBX3P4-202ENST00000540428 EPS15P42566 896 aa15.7■□□□□ 0.1
CBX3P4-202ENST00000540428 CTCFP49711 727 aaPredicted RBP15.7■□□□□ 0.1
CBX3P4-202ENST00000540428 DEFB115Q30KQ5 88 aa15.7■□□□□ 0.1
CBX3P4-202ENST00000540428 SP8Q8IXZ3 490 aa15.7■□□□□ 0.1
CBX3P4-202ENST00000540428 AIMP1Q12904 312 aaKnown RBP15.69■□□□□ 0.1
CBX3P4-202ENST00000540428 AOC3Q16853 763 aa15.69■□□□□ 0.1
CBX3P4-202ENST00000540428 SLC51AQ86UW1 340 aa15.69■□□□□ 0.1
CBX3P4-202ENST00000540428 WBP1LQ9NX94 342 aa15.69■□□□□ 0.1
CBX3P4-202ENST00000540428 ZNRF3Q9ULT6 936 aa15.69■□□□□ 0.1
CBX3P4-202ENST00000540428 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 GRAPQ13588 217 aa15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 DPP8Q6V1X1 898 aaPredicted RBP15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 DDX46Q7L014 1031 aaKnown RBP15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 MPNDQ8N594 471 aa15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 GRAPLQ8TC17 118 aaPredicted RBP15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 RUNDC1Q96C34 613 aa15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 ADARB2Q9NS39 739 aaKnown RBP15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 GPRC5DQ9NZD1 345 aa15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 TRMT112Q9UI30 125 aaKnown RBP15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
CBX3P4-202ENST00000540428 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 MAP2K1Q02750 393 aaPredicted RBP15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 CXCL9Q07325 125 aa15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 KIAA2012Q0VF49 1180 aa15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 NEUROD2Q15784 382 aa15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 NECTIN2Q92692 538 aa15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 ABT1Q9ULW3 272 aaKnown RBP15.67■□□□□ 0.1
CBX3P4-202ENST00000540428 TRIM35Q9UPQ4 493 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms