RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 CC2D2BQ6DHV5 1058 aa21.95■■□□□ 1.1
PTPN6-210ENST00000538318 RPGRQ92834 1020 aaKnown RBP21.95■■□□□ 1.1
PTPN6-210ENST00000538318 TAF1DQ9H5J8 278 aaPredicted RBP21.95■■□□□ 1.1
PTPN6-210ENST00000538318 PARP10Q53GL7 1025 aa21.94■■□□□ 1.1
PTPN6-210ENST00000538318 PPP1R42Q7Z4L9 355 aa21.94■■□□□ 1.1
PTPN6-210ENST00000538318 MYBBP1AQ9BQG0 1328 aaKnown RBP21.94■■□□□ 1.1
PTPN6-210ENST00000538318 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
PTPN6-210ENST00000538318 PROSER3Q2NL68 480 aa21.93■■□□□ 1.1
PTPN6-210ENST00000538318 GRIPAP1Q4V328 841 aa21.93■■□□□ 1.1
PTPN6-210ENST00000538318 LDHDQ86WU2 507 aa21.93■■□□□ 1.1
PTPN6-210ENST00000538318 RBM17Q96I25 401 aaKnown RBP21.93■■□□□ 1.1
PTPN6-210ENST00000538318 CRAMP1Q96RY5 1269 aa21.93■■□□□ 1.1
PTPN6-210ENST00000538318 CREBZFQ9NS37 354 aa21.92■■□□□ 1.1
PTPN6-210ENST00000538318 ANXA1P04083 346 aa21.91■■□□□ 1.1
PTPN6-210ENST00000538318 SLC10A5Q5PT55 438 aa21.91■■□□□ 1.1
PTPN6-210ENST00000538318 C3orf67Q6ZVT6 689 aa21.91■■□□□ 1.1
PTPN6-210ENST00000538318 HACL1Q9UJ83 578 aa21.91■■□□□ 1.1
PTPN6-210ENST00000538318 PASKQ96RG2 1323 aa21.9■■□□□ 1.1
PTPN6-210ENST00000538318 CHL1O00533 1208 aa21.9■■□□□ 1.1
PTPN6-210ENST00000538318 CCDC146Q8IYE0 955 aa21.9■■□□□ 1.1
PTPN6-210ENST00000538318 GPC2Q8N158 579 aa21.9■■□□□ 1.1
PTPN6-210ENST00000538318 JDP2Q8WYK2 163 aa21.9■■□□□ 1.1
PTPN6-210ENST00000538318 NEUROD2Q15784 382 aa21.89■■□□□ 1.09
PTPN6-210ENST00000538318 COL13A1Q5TAT6 717 aaPredicted RBP21.89■■□□□ 1.09
PTPN6-210ENST00000538318 RUNDC1Q96C34 613 aa21.89■■□□□ 1.09
PTPN6-210ENST00000538318 NLRP3Q96P20 1036 aa21.89■■□□□ 1.09
PTPN6-210ENST00000538318 UTP14AQ9BVJ6 771 aaKnown RBP21.89■■□□□ 1.09
PTPN6-210ENST00000538318 PPEF1O14829 653 aaPredicted RBP21.88■■□□□ 1.09
PTPN6-210ENST00000538318 EPHX2P34913 555 aa21.88■■□□□ 1.09
PTPN6-210ENST00000538318 COPS6Q7L5N1 327 aa21.88■■□□□ 1.09
PTPN6-210ENST00000538318 TRIM35Q9UPQ4 493 aa21.88■■□□□ 1.09
PTPN6-210ENST00000538318 ADAMTSL1Q8N6G6 1762 aa21.88■■□□□ 1.09
PTPN6-210ENST00000538318 COL4A5P29400 1685 aa21.88■■□□□ 1.09
PTPN6-210ENST00000538318 ANKRD36CQ5JPF3 1778 aa21.87■■□□□ 1.09
PTPN6-210ENST00000538318 RNF123Q5XPI4 1314 aa21.87■■□□□ 1.09
PTPN6-210ENST00000538318 ITGBL1O95965 494 aaPredicted RBP21.87■■□□□ 1.09
PTPN6-210ENST00000538318 EAPPQ56P03 285 aaPredicted RBP21.87■■□□□ 1.09
PTPN6-210ENST00000538318 PNMA8AQ86V59 439 aaPredicted RBP21.87■■□□□ 1.09
PTPN6-210ENST00000538318 XAGE3Q8WTP9 111 aa21.87■■□□□ 1.09
PTPN6-210ENST00000538318 NECTIN2Q92692 538 aa21.87■■□□□ 1.09
PTPN6-210ENST00000538318 HSP90AB3PQ58FF7 597 aa21.86■■□□□ 1.09
PTPN6-210ENST00000538318 SLC51AQ86UW1 340 aa21.86■■□□□ 1.09
PTPN6-210ENST00000538318 DDX21Q9NR30 783 aaKnown RBP eCLIP21.86■■□□□ 1.09
PTPN6-210ENST00000538318 HSPA1AP0DMV8 641 aaKnown RBP21.85■■□□□ 1.09
PTPN6-210ENST00000538318 HSPA1BP0DMV9 641 aaKnown RBP21.85■■□□□ 1.09
PTPN6-210ENST00000538318 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
PTPN6-210ENST00000538318 AIMP1Q12904 312 aaKnown RBP21.85■■□□□ 1.09
PTPN6-210ENST00000538318 WDR43Q15061 677 aaKnown RBP eCLIP21.85■■□□□ 1.09
PTPN6-210ENST00000538318 KRT24Q2M2I5 525 aa21.85■■□□□ 1.09
PTPN6-210ENST00000538318 NLRP10Q86W26 655 aa21.85■■□□□ 1.09
PTPN6-210ENST00000538318 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
PTPN6-210ENST00000538318 TCERG1O14776 1098 aaKnown RBP21.84■■□□□ 1.09
PTPN6-210ENST00000538318 TCIRG1Q13488 830 aa21.84■■□□□ 1.09
PTPN6-210ENST00000538318 LARGE2Q8N3Y3 721 aa21.84■■□□□ 1.09
PTPN6-210ENST00000538318 MKRN1Q9UHC7 482 aaKnown RBP21.84■■□□□ 1.09
PTPN6-210ENST00000538318 ATP6V0A2Q9Y487 856 aa21.84■■□□□ 1.09
PTPN6-210ENST00000538318 ABCC4O15439 1325 aa21.83■■□□□ 1.09
PTPN6-210ENST00000538318 HOXB7P09629 217 aa21.83■■□□□ 1.09
PTPN6-210ENST00000538318 CLEC11AQ9Y240 323 aa21.83■■□□□ 1.09
PTPN6-210ENST00000538318 LAS1LQ9Y4W2 734 aaKnown RBP21.83■■□□□ 1.09
PTPN6-210ENST00000538318 LAMB2P55268 1798 aa21.83■■□□□ 1.09
PTPN6-210ENST00000538318 TMX4Q9H1E5 349 aaPredicted RBP21.82■■□□□ 1.08
PTPN6-210ENST00000538318 VPS33BQ9H267 617 aa21.82■■□□□ 1.08
PTPN6-210ENST00000538318 GJA3Q9Y6H8 435 aa21.82■■□□□ 1.08
PTPN6-210ENST00000538318 CNTNAP1P78357 1384 aa21.82■■□□□ 1.08
PTPN6-210ENST00000538318 LTBP1Q14766 1721 aa21.81■■□□□ 1.08
PTPN6-210ENST00000538318 TMEM88BA6NKF7 163 aa21.81■■□□□ 1.08
PTPN6-210ENST00000538318 BBOX1O75936 387 aa21.81■■□□□ 1.08
PTPN6-210ENST00000538318 CHPF2Q9P2E5 772 aa21.81■■□□□ 1.08
PTPN6-210ENST00000538318 TRMT112Q9UI30 125 aaKnown RBP21.81■■□□□ 1.08
PTPN6-210ENST00000538318 HCLS1P14317 486 aaPredicted RBP21.8■■□□□ 1.08
PTPN6-210ENST00000538318 HDGFL1Q5TGJ6 251 aa21.8■■□□□ 1.08
PTPN6-210ENST00000538318 MAP1SQ66K74 1059 aaPredicted RBP21.8■■□□□ 1.08
PTPN6-210ENST00000538318 NIM1KQ8IY84 436 aa21.8■■□□□ 1.08
PTPN6-210ENST00000538318 CNTROBQ8N137 903 aa21.8■■□□□ 1.08
PTPN6-210ENST00000538318 CFAP44Q96MT7 982 aa21.8■■□□□ 1.08
PTPN6-210ENST00000538318 RTFDC1Q9BY42 306 aaPredicted RBP21.8■■□□□ 1.08
PTPN6-210ENST00000538318 SH3TC1Q8TE82 1336 aa21.8■■□□□ 1.08
PTPN6-210ENST00000538318 PPIP5K2O43314 1243 aa21.79■■□□□ 1.08
PTPN6-210ENST00000538318 LMOD1P29536 600 aaPredicted RBP21.79■■□□□ 1.08
PTPN6-210ENST00000538318 SCNN1DP51172 638 aa21.79■■□□□ 1.08
PTPN6-210ENST00000538318 SP8Q8IXZ3 490 aa21.79■■□□□ 1.08
PTPN6-210ENST00000538318 AOC3Q16853 763 aa21.78■■□□□ 1.08
PTPN6-210ENST00000538318 SUPT20HQ8NEM7 779 aa21.78■■□□□ 1.08
PTPN6-210ENST00000538318 PLBD2Q8NHP8 589 aa21.78■■□□□ 1.08
PTPN6-210ENST00000538318 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
PTPN6-210ENST00000538318 DBF4Q9UBU7 674 aaPredicted RBP21.78■■□□□ 1.08
PTPN6-210ENST00000538318 EPS15P42566 896 aa21.77■■□□□ 1.08
PTPN6-210ENST00000538318 ANKRD13DQ6ZTN6 518 aa21.77■■□□□ 1.08
PTPN6-210ENST00000538318 DDX46Q7L014 1031 aaKnown RBP21.77■■□□□ 1.08
PTPN6-210ENST00000538318 TNS4Q8IZW8 715 aa21.76■■□□□ 1.07
PTPN6-210ENST00000538318 VEGFBP49765 207 aa21.75■■□□□ 1.07
PTPN6-210ENST00000538318 GRAPQ13588 217 aa21.75■■□□□ 1.07
PTPN6-210ENST00000538318 DUSP27Q5VZP5 1158 aa21.75■■□□□ 1.07
PTPN6-210ENST00000538318 DPP8Q6V1X1 898 aaPredicted RBP21.75■■□□□ 1.07
PTPN6-210ENST00000538318 USP50Q70EL3 339 aaPredicted RBP21.75■■□□□ 1.07
PTPN6-210ENST00000538318 MPNDQ8N594 471 aa21.75■■□□□ 1.07
PTPN6-210ENST00000538318 GRAPLQ8TC17 118 aaPredicted RBP21.75■■□□□ 1.07
PTPN6-210ENST00000538318 ISCA1Q9BUE6 129 aa21.75■■□□□ 1.07
PTPN6-210ENST00000538318 MBIPQ9NS73 344 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms