RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 SYNE4Q8N205 404 aa12.67□□□□□ -0.38
CHD4-207ENST00000537634 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
CHD4-207ENST00000537634 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
CHD4-207ENST00000537634 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
CHD4-207ENST00000537634 PSMD1Q99460 953 aa12.67□□□□□ -0.38
CHD4-207ENST00000537634 ZNF541Q9H0D2 1346 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 ANXA1P04083 346 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
CHD4-207ENST00000537634 PROSER3Q2NL68 480 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 LRP10Q7Z4F1 713 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 JDP2Q8WYK2 163 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 NECTIN2Q92692 538 aa12.66□□□□□ -0.38
CHD4-207ENST00000537634 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
CHD4-207ENST00000537634 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
CHD4-207ENST00000537634 POTEIP0CG38 1075 aa12.65□□□□□ -0.38
CHD4-207ENST00000537634 POTEJP0CG39 1038 aa12.65□□□□□ -0.38
CHD4-207ENST00000537634 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
CHD4-207ENST00000537634 GRIPAP1Q4V328 841 aa12.65□□□□□ -0.38
CHD4-207ENST00000537634 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.38
CHD4-207ENST00000537634 LDHDQ86WU2 507 aa12.65□□□□□ -0.38
CHD4-207ENST00000537634 NLRP3Q96P20 1036 aa12.65□□□□□ -0.38
CHD4-207ENST00000537634 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
CHD4-207ENST00000537634 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
CHD4-207ENST00000537634 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
CHD4-207ENST00000537634 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
CHD4-207ENST00000537634 FZD9O00144 591 aa12.64□□□□□ -0.39
CHD4-207ENST00000537634 CHL1O00533 1208 aa12.64□□□□□ -0.39
CHD4-207ENST00000537634 COPS6Q7L5N1 327 aa12.64□□□□□ -0.39
CHD4-207ENST00000537634 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
CHD4-207ENST00000537634 TMX4Q9H1E5 349 aaPredicted RBP12.64□□□□□ -0.39
CHD4-207ENST00000537634 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHD4-207ENST00000537634 HACL1Q9UJ83 578 aa12.64□□□□□ -0.39
CHD4-207ENST00000537634 LAMB2P55268 1798 aa12.64□□□□□ -0.39
CHD4-207ENST00000537634 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
CHD4-207ENST00000537634 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
CHD4-207ENST00000537634 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
CHD4-207ENST00000537634 EAPPQ56P03 285 aaPredicted RBP12.63□□□□□ -0.39
CHD4-207ENST00000537634 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
CHD4-207ENST00000537634 GPC2Q8N158 579 aa12.63□□□□□ -0.39
CHD4-207ENST00000537634 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
CHD4-207ENST00000537634 ADAMTS8Q9UP79 889 aa12.63□□□□□ -0.39
CHD4-207ENST00000537634 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
CHD4-207ENST00000537634 COL4A5P29400 1685 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 HOXB7P09629 217 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 EPHX2P34913 555 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 NLRP10Q86W26 655 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 LARGE2Q8N3Y3 721 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 PRKRIP1Q9H875 184 aaPredicted RBP12.62□□□□□ -0.39
CHD4-207ENST00000537634 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
CHD4-207ENST00000537634 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
CHD4-207ENST00000537634 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
CHD4-207ENST00000537634 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
CHD4-207ENST00000537634 TRMT112Q9UI30 125 aaKnown RBP12.61□□□□□ -0.39
CHD4-207ENST00000537634 ABCC4O15439 1325 aa12.61□□□□□ -0.39
CHD4-207ENST00000537634 SH3TC1Q8TE82 1336 aa12.61□□□□□ -0.39
CHD4-207ENST00000537634 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
CHD4-207ENST00000537634 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
CHD4-207ENST00000537634 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
CHD4-207ENST00000537634 NIM1KQ8IY84 436 aa12.6□□□□□ -0.39
CHD4-207ENST00000537634 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
CHD4-207ENST00000537634 ATP6V0A2Q9Y487 856 aa12.6□□□□□ -0.39
CHD4-207ENST00000537634 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
CHD4-207ENST00000537634 PASKQ96RG2 1323 aa12.6□□□□□ -0.39
CHD4-207ENST00000537634 PPIP5K2O43314 1243 aa12.59□□□□□ -0.39
CHD4-207ENST00000537634 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
CHD4-207ENST00000537634 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
CHD4-207ENST00000537634 DDX46Q7L014 1031 aaKnown RBP12.59□□□□□ -0.39
CHD4-207ENST00000537634 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
CHD4-207ENST00000537634 PLBD2Q8NHP8 589 aa12.59□□□□□ -0.39
CHD4-207ENST00000537634 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
CHD4-207ENST00000537634 MKRN1Q9UHC7 482 aaKnown RBP12.59□□□□□ -0.39
CHD4-207ENST00000537634 BBOX1O75936 387 aa12.58□□□□□ -0.4
CHD4-207ENST00000537634 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
CHD4-207ENST00000537634 LTBP1Q14766 1721 aa12.58□□□□□ -0.4
CHD4-207ENST00000537634 AOC3Q16853 763 aa12.58□□□□□ -0.4
CHD4-207ENST00000537634 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
CHD4-207ENST00000537634 DDX60Q8IY21 1712 aaKnown RBP12.58□□□□□ -0.4
CHD4-207ENST00000537634 VPS33BQ9H267 617 aa12.58□□□□□ -0.4
CHD4-207ENST00000537634 MBIPQ9NS73 344 aa12.58□□□□□ -0.4
CHD4-207ENST00000537634 HYPKQ9NX55 129 aa12.58□□□□□ -0.4
CHD4-207ENST00000537634 CNTNAP1P78357 1384 aa12.57□□□□□ -0.4
CHD4-207ENST00000537634 TMEM88BA6NKF7 163 aa12.57□□□□□ -0.4
CHD4-207ENST00000537634 ITGBL1O95965 494 aaPredicted RBP12.57□□□□□ -0.4
CHD4-207ENST00000537634 GRAPQ13588 217 aa12.57□□□□□ -0.4
CHD4-207ENST00000537634 COL13A1Q5TAT6 717 aaPredicted RBP12.57□□□□□ -0.4
CHD4-207ENST00000537634 MAP1SQ66K74 1059 aaPredicted RBP12.57□□□□□ -0.4
CHD4-207ENST00000537634 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
CHD4-207ENST00000537634 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
CHD4-207ENST00000537634 SP8Q8IXZ3 490 aa12.57□□□□□ -0.4
CHD4-207ENST00000537634 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
CHD4-207ENST00000537634 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
CHD4-207ENST00000537634 APAF1O14727 1248 aa12.56□□□□□ -0.4
CHD4-207ENST00000537634 SCNN1DP51172 638 aa12.56□□□□□ -0.4
CHD4-207ENST00000537634 GNAI1P63096 354 aa12.56□□□□□ -0.4
CHD4-207ENST00000537634 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms