RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 RIC1Q4ADV7 1423 aa27.04■■□□□ 1.92
LTBR-205ENST00000535739 HOXA10P31260 410 aaPredicted RBP27.03■■□□□ 1.92
LTBR-205ENST00000535739 LMOD3Q0VAK6 560 aa27.03■■□□□ 1.92
LTBR-205ENST00000535739 NEUROD2Q15784 382 aa27.03■■□□□ 1.92
LTBR-205ENST00000535739 MYBBP1AQ9BQG0 1328 aaKnown RBP27.03■■□□□ 1.92
LTBR-205ENST00000535739 TAF1DQ9H5J8 278 aaPredicted RBP27.03■■□□□ 1.92
LTBR-205ENST00000535739 C3orf67Q6ZVT6 689 aa27.02■■□□□ 1.92
LTBR-205ENST00000535739 PSMD1Q99460 953 aa27.02■■□□□ 1.92
LTBR-205ENST00000535739 ZEB1P37275 1124 aaPredicted RBP27.01■■□□□ 1.91
LTBR-205ENST00000535739 PPP1R42Q7Z4L9 355 aa27.01■■□□□ 1.91
LTBR-205ENST00000535739 SLC51AQ86UW1 340 aa27.01■■□□□ 1.91
LTBR-205ENST00000535739 NECTIN2Q92692 538 aa27.01■■□□□ 1.91
LTBR-205ENST00000535739 FZD9O00144 591 aa27■■□□□ 1.91
LTBR-205ENST00000535739 LDHDQ86WU2 507 aa27■■□□□ 1.91
LTBR-205ENST00000535739 RBM17Q96I25 401 aaKnown RBP27■■□□□ 1.91
LTBR-205ENST00000535739 ANKRD36CQ5JPF3 1778 aa26.99■■□□□ 1.91
LTBR-205ENST00000535739 PARP10Q53GL7 1025 aa26.99■■□□□ 1.91
LTBR-205ENST00000535739 CC2D2BQ6DHV5 1058 aa26.99■■□□□ 1.91
LTBR-205ENST00000535739 CRAMP1Q96RY5 1269 aa26.99■■□□□ 1.91
LTBR-205ENST00000535739 TCERG1O14776 1098 aaKnown RBP26.98■■□□□ 1.91
LTBR-205ENST00000535739 EAPPQ56P03 285 aaPredicted RBP26.98■■□□□ 1.91
LTBR-205ENST00000535739 HACL1Q9UJ83 578 aa26.98■■□□□ 1.91
LTBR-205ENST00000535739 COL4A5P29400 1685 aa26.98■■□□□ 1.91
LTBR-205ENST00000535739 PPEF1O14829 653 aaPredicted RBP26.97■■□□□ 1.91
LTBR-205ENST00000535739 AIMP1Q12904 312 aaKnown RBP26.97■■□□□ 1.91
LTBR-205ENST00000535739 KRT24Q2M2I5 525 aa26.97■■□□□ 1.91
LTBR-205ENST00000535739 COL13A1Q5TAT6 717 aaPredicted RBP26.97■■□□□ 1.91
LTBR-205ENST00000535739 COPS6Q7L5N1 327 aa26.97■■□□□ 1.91
LTBR-205ENST00000535739 JDP2Q8WYK2 163 aa26.97■■□□□ 1.91
LTBR-205ENST00000535739 UTP14AQ9BVJ6 771 aaKnown RBP26.97■■□□□ 1.91
LTBR-205ENST00000535739 CREBZFQ9NS37 354 aa26.97■■□□□ 1.91
LTBR-205ENST00000535739 RNF123Q5XPI4 1314 aa26.96■■□□□ 1.91
LTBR-205ENST00000535739 XAGE3Q8WTP9 111 aa26.96■■□□□ 1.91
LTBR-205ENST00000535739 NLRP3Q96P20 1036 aa26.96■■□□□ 1.91
LTBR-205ENST00000535739 LAS1LQ9Y4W2 734 aaKnown RBP26.96■■□□□ 1.91
LTBR-205ENST00000535739 LAMB2P55268 1798 aa26.95■■□□□ 1.9
LTBR-205ENST00000535739 CHL1O00533 1208 aa26.95■■□□□ 1.9
LTBR-205ENST00000535739 EPHX2P34913 555 aa26.95■■□□□ 1.9
LTBR-205ENST00000535739 WDR43Q15061 677 aaKnown RBP eCLIP26.95■■□□□ 1.9
LTBR-205ENST00000535739 RUNDC1Q96C34 613 aa26.95■■□□□ 1.9
LTBR-205ENST00000535739 TRIM35Q9UPQ4 493 aa26.95■■□□□ 1.9
LTBR-205ENST00000535739 PASKQ96RG2 1323 aa26.94■■□□□ 1.9
LTBR-205ENST00000535739 HSPA1AP0DMV8 641 aaKnown RBP26.94■■□□□ 1.9
LTBR-205ENST00000535739 HSPA1BP0DMV9 641 aaKnown RBP26.94■■□□□ 1.9
LTBR-205ENST00000535739 SLC10A5Q5PT55 438 aa26.94■■□□□ 1.9
LTBR-205ENST00000535739 GPC2Q8N158 579 aa26.94■■□□□ 1.9
LTBR-205ENST00000535739 MKRN1Q9UHC7 482 aaKnown RBP26.94■■□□□ 1.9
LTBR-205ENST00000535739 ADAMTSL1Q8N6G6 1762 aa26.94■■□□□ 1.9
LTBR-205ENST00000535739 GRIPAP1Q4V328 841 aa26.93■■□□□ 1.9
LTBR-205ENST00000535739 CLEC11AQ9Y240 323 aa26.93■■□□□ 1.9
LTBR-205ENST00000535739 EIF6P56537 245 aaKnown RBP26.92■■□□□ 1.9
LTBR-205ENST00000535739 LARGE2Q8N3Y3 721 aa26.92■■□□□ 1.9
LTBR-205ENST00000535739 DDX21Q9NR30 783 aaKnown RBP eCLIP26.92■■□□□ 1.9
LTBR-205ENST00000535739 ADAMTS8Q9UP79 889 aa26.92■■□□□ 1.9
LTBR-205ENST00000535739 GJA3Q9Y6H8 435 aa26.92■■□□□ 1.9
LTBR-205ENST00000535739 ITGBL1O95965 494 aaPredicted RBP26.91■■□□□ 1.9
LTBR-205ENST00000535739 HSP90AB3PQ58FF7 597 aa26.91■■□□□ 1.9
LTBR-205ENST00000535739 NLRP10Q86W26 655 aa26.91■■□□□ 1.9
LTBR-205ENST00000535739 PNMA8AQ86V59 439 aaPredicted RBP26.9■■□□□ 1.9
LTBR-205ENST00000535739 ABCC4O15439 1325 aa26.9■■□□□ 1.9
LTBR-205ENST00000535739 TAF1P21675 1872 aa26.89■■□□□ 1.9
LTBR-205ENST00000535739 HCLS1P14317 486 aaPredicted RBP26.89■■□□□ 1.9
LTBR-205ENST00000535739 TCIRG1Q13488 830 aa26.89■■□□□ 1.9
LTBR-205ENST00000535739 CHPF2Q9P2E5 772 aa26.89■■□□□ 1.9
LTBR-205ENST00000535739 ATP6V0A2Q9Y487 856 aa26.89■■□□□ 1.9
LTBR-205ENST00000535739 LTBP1Q14766 1721 aa26.89■■□□□ 1.9
LTBR-205ENST00000535739 ZNF428Q96B54 188 aa26.88■■□□□ 1.89
LTBR-205ENST00000535739 MAP1SQ66K74 1059 aaPredicted RBP26.87■■□□□ 1.89
LTBR-205ENST00000535739 TMX4Q9H1E5 349 aaPredicted RBP26.87■■□□□ 1.89
LTBR-205ENST00000535739 TRMT112Q9UI30 125 aaKnown RBP26.87■■□□□ 1.89
LTBR-205ENST00000535739 CNTNAP1P78357 1384 aa26.86■■□□□ 1.89
LTBR-205ENST00000535739 PPIP5K2O43314 1243 aa26.86■■□□□ 1.89
LTBR-205ENST00000535739 HDGFL1Q5TGJ6 251 aa26.86■■□□□ 1.89
LTBR-205ENST00000535739 CNTROBQ8N137 903 aa26.86■■□□□ 1.89
LTBR-205ENST00000535739 TMEM88BA6NKF7 163 aa26.85■■□□□ 1.89
LTBR-205ENST00000535739 AOC3Q16853 763 aa26.85■■□□□ 1.89
LTBR-205ENST00000535739 NIM1KQ8IY84 436 aa26.85■■□□□ 1.89
LTBR-205ENST00000535739 LMOD1P29536 600 aaPredicted RBP26.84■■□□□ 1.89
LTBR-205ENST00000535739 EPS15P42566 896 aa26.84■■□□□ 1.89
LTBR-205ENST00000535739 SCNN1DP51172 638 aa26.84■■□□□ 1.89
LTBR-205ENST00000535739 SH3TC1Q8TE82 1336 aa26.84■■□□□ 1.89
LTBR-205ENST00000535739 BBOX1O75936 387 aa26.83■■□□□ 1.89
LTBR-205ENST00000535739 PRKRIP1Q9H875 184 aaPredicted RBP26.83■■□□□ 1.89
LTBR-205ENST00000535739 HOXB7P09629 217 aa26.82■■□□□ 1.88
LTBR-205ENST00000535739 DDX46Q7L014 1031 aaKnown RBP26.82■■□□□ 1.88
LTBR-205ENST00000535739 SP8Q8IXZ3 490 aa26.82■■□□□ 1.88
LTBR-205ENST00000535739 TNS4Q8IZW8 715 aa26.82■■□□□ 1.88
LTBR-205ENST00000535739 PLBD2Q8NHP8 589 aa26.82■■□□□ 1.88
LTBR-205ENST00000535739 CFAP44Q96MT7 982 aa26.82■■□□□ 1.88
LTBR-205ENST00000535739 DDX60Q8IY21 1712 aaKnown RBP26.82■■□□□ 1.88
LTBR-205ENST00000535739 ANKRD13DQ6ZTN6 518 aa26.81■■□□□ 1.88
LTBR-205ENST00000535739 RTFDC1Q9BY42 306 aaPredicted RBP26.81■■□□□ 1.88
LTBR-205ENST00000535739 VPS33BQ9H267 617 aa26.81■■□□□ 1.88
LTBR-205ENST00000535739 DBF4Q9UBU7 674 aaPredicted RBP26.81■■□□□ 1.88
LTBR-205ENST00000535739 DUSP27Q5VZP5 1158 aa26.8■■□□□ 1.88
LTBR-205ENST00000535739 DPP8Q6V1X1 898 aaPredicted RBP26.8■■□□□ 1.88
LTBR-205ENST00000535739 SUPT20HQ8NEM7 779 aa26.8■■□□□ 1.88
LTBR-205ENST00000535739 MBIPQ9NS73 344 aa26.8■■□□□ 1.88
LTBR-205ENST00000535739 VEGFBP49765 207 aa26.79■■□□□ 1.88
LTBR-205ENST00000535739 GRAPQ13588 217 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms