RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 CCDC186Q7Z3E2 898 aa16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 DNAJC25Q9H1X3 360 aa16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 CSPP1Q1MSJ5 1256 aa16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 BICD2Q8TD16 824 aa16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 DDX17Q92841 729 aaKnown RBP16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 ADCY9O60503 1353 aa16.58■□□□□ 0.24
LPCAT3-203ENST00000535479 RGPD8O14715 1765 aaPredicted RBP16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 NR1I2O75469 434 aa16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 HSP90AB3PQ58FF7 597 aa16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 CCDC85AQ96PX6 553 aaPredicted RBP16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 ECHDC1Q9NTX5 307 aa16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 ZC3H6P61129 1189 aaKnown RBP16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
LPCAT3-203ENST00000535479 SLC27A2O14975 620 aa16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 GLRX3O76003 335 aaKnown RBP16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 TRIM5Q9C035 493 aa16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
LPCAT3-203ENST00000535479 MON2Q7Z3U7 1717 aa16.55■□□□□ 0.24
LPCAT3-203ENST00000535479 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
LPCAT3-203ENST00000535479 DYNC1I1O14576 645 aa16.55■□□□□ 0.24
LPCAT3-203ENST00000535479 FGD1P98174 961 aa16.55■□□□□ 0.24
LPCAT3-203ENST00000535479 STK11IPQ8N1F8 1099 aa16.55■□□□□ 0.24
LPCAT3-203ENST00000535479 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 TYRO3Q06418 890 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 OTUD7BQ6GQQ9 843 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 MYRIPQ8NFW9 859 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 MRVI1Q9Y6F6 885 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 PSME1Q06323 249 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 G3BP1Q13283 466 aaKnown RBP eCLIP16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 SPATA32Q96LK8 384 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 TNMDQ9H2S6 317 aa16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 TRMT1Q9NXH9 659 aaKnown RBP16.54■□□□□ 0.24
LPCAT3-203ENST00000535479 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 MYD88Q99836 296 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 NUP62CLQ9H1M0 184 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 CBX8Q9HC52 389 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 GJB4Q9NTQ9 266 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 USP31Q70CQ4 1352 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 FUCA2Q9BTY2 467 aa16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
LPCAT3-203ENST00000535479 NECTIN1Q15223 517 aa16.52■□□□□ 0.24
LPCAT3-203ENST00000535479 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
LPCAT3-203ENST00000535479 AXIN2Q9Y2T1 843 aa16.52■□□□□ 0.24
LPCAT3-203ENST00000535479 KDRP35968 1356 aa16.52■□□□□ 0.24
LPCAT3-203ENST00000535479 CCDC144BQ3MJ40 725 aa16.52■□□□□ 0.24
LPCAT3-203ENST00000535479 VPS53Q5VIR6 699 aa16.52■□□□□ 0.24
LPCAT3-203ENST00000535479 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
LPCAT3-203ENST00000535479 TOB2Q14106 344 aaPredicted RBP16.52■□□□□ 0.23
LPCAT3-203ENST00000535479 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.23
LPCAT3-203ENST00000535479 BRF1Q92994 677 aa16.52■□□□□ 0.23
LPCAT3-203ENST00000535479 PGBD1Q96JS3 809 aa16.52■□□□□ 0.23
LPCAT3-203ENST00000535479 ZSWIM6Q9HCJ5 1215 aa16.52■□□□□ 0.23
LPCAT3-203ENST00000535479 PRDM4Q9UKN5 801 aa16.52■□□□□ 0.23
LPCAT3-203ENST00000535479 GOLGB1Q14789 3259 aaKnown RBP16.51■□□□□ 0.23
LPCAT3-203ENST00000535479 USP27XA6NNY8 438 aa16.51■□□□□ 0.23
LPCAT3-203ENST00000535479 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
LPCAT3-203ENST00000535479 KIF3AQ9Y496 699 aa16.51■□□□□ 0.23
LPCAT3-203ENST00000535479 CCDC192P0DO97 292 aa16.51■□□□□ 0.23
LPCAT3-203ENST00000535479 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
LPCAT3-203ENST00000535479 KRT85P78386 507 aa16.5■□□□□ 0.23
LPCAT3-203ENST00000535479 NEUROD6Q96NK8 337 aa16.5■□□□□ 0.23
LPCAT3-203ENST00000535479 TFCP2Q12800 502 aa16.5■□□□□ 0.23
LPCAT3-203ENST00000535479 NRKQ7Z2Y5 1582 aa16.5■□□□□ 0.23
LPCAT3-203ENST00000535479 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
LPCAT3-203ENST00000535479 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 Q6ZUG5 572 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 KIAA1524Q8TCG1 905 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 COL15A1P39059 1388 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 IGKV5-2P06315 115 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 CABLES1Q8TDN4 633 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 AKAP12Q02952 1782 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 H3BQV1 296 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 IFFO2Q5TF58 517 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 DBNDD2Q9BQY9 259 aa16.49■□□□□ 0.23
LPCAT3-203ENST00000535479 GRM8O00222 908 aa16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 BIN1O00499 593 aa16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 MCM5P33992 734 aa16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 HAND2P61296 217 aa16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 APOBRQ0VD83 1088 aa16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 LEO1Q8WVC0 666 aaPredicted RBP16.48■□□□□ 0.23
LPCAT3-203ENST00000535479 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms