RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 PDIA6Q15084 440 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 PROSER3Q2NL68 480 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 GRIPAP1Q4V328 841 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 HSP90AB3PQ58FF7 597 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 CHADLQ6NUI6 762 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 SYNE4Q8N205 404 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 NECTIN2Q92692 538 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 L3MBTL3Q96JM7 780 aaPredicted RBP24.11■■□□□ 1.45
CTSB-233ENST00000534636 PSMD1Q99460 953 aa24.11■■□□□ 1.45
CTSB-233ENST00000534636 UTP14AQ9BVJ6 771 aaKnown RBP24.11■■□□□ 1.45
CTSB-233ENST00000534636 TMX4Q9H1E5 349 aaPredicted RBP24.11■■□□□ 1.45
CTSB-233ENST00000534636 ANXA1P04083 346 aa24.1■■□□□ 1.45
CTSB-233ENST00000534636 HOXA10P31260 410 aaPredicted RBP24.1■■□□□ 1.45
CTSB-233ENST00000534636 LRP10Q7Z4F1 713 aa24.1■■□□□ 1.45
CTSB-233ENST00000534636 JDP2Q8WYK2 163 aa24.1■■□□□ 1.45
CTSB-233ENST00000534636 RNF123Q5XPI4 1314 aa24.1■■□□□ 1.45
CTSB-233ENST00000534636 PPEF1O14829 653 aaPredicted RBP24.09■■□□□ 1.45
CTSB-233ENST00000534636 AIMP1Q12904 312 aaKnown RBP24.09■■□□□ 1.45
CTSB-233ENST00000534636 JMYQ8N9B5 988 aa24.09■■□□□ 1.45
CTSB-233ENST00000534636 NLRP3Q96P20 1036 aa24.09■■□□□ 1.45
CTSB-233ENST00000534636 ZNF541Q9H0D2 1346 aa24.09■■□□□ 1.45
CTSB-233ENST00000534636 CHL1O00533 1208 aa24.08■■□□□ 1.45
CTSB-233ENST00000534636 COPS6Q7L5N1 327 aa24.08■■□□□ 1.45
CTSB-233ENST00000534636 CRAMP1Q96RY5 1269 aa24.08■■□□□ 1.45
CTSB-233ENST00000534636 ADAMTS8Q9UP79 889 aa24.08■■□□□ 1.45
CTSB-233ENST00000534636 LDHDQ86WU2 507 aa24.07■■□□□ 1.44
CTSB-233ENST00000534636 XAGE3Q8WTP9 111 aa24.07■■□□□ 1.44
CTSB-233ENST00000534636 DDX21Q9NR30 783 aaKnown RBP eCLIP24.07■■□□□ 1.44
CTSB-233ENST00000534636 TRIM35Q9UPQ4 493 aa24.07■■□□□ 1.44
CTSB-233ENST00000534636 TAF1DQ9H5J8 278 aaPredicted RBP24.06■■□□□ 1.44
CTSB-233ENST00000534636 PRKRIP1Q9H875 184 aaPredicted RBP24.06■■□□□ 1.44
CTSB-233ENST00000534636 HACL1Q9UJ83 578 aa24.06■■□□□ 1.44
CTSB-233ENST00000534636 SNED1Q8TER0 1413 aa24.06■■□□□ 1.44
CTSB-233ENST00000534636 HDGFL1Q5TGJ6 251 aa24.05■■□□□ 1.44
CTSB-233ENST00000534636 LAMB2P55268 1798 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 FZD9O00144 591 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
CTSB-233ENST00000534636 HOXB7P09629 217 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 POTEIP0CG38 1075 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 POTEJP0CG39 1038 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 EIF6P56537 245 aaKnown RBP24.04■■□□□ 1.44
CTSB-233ENST00000534636 KRT24Q2M2I5 525 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 EAPPQ56P03 285 aaPredicted RBP24.04■■□□□ 1.44
CTSB-233ENST00000534636 GPC2Q8N158 579 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 CHPF2Q9P2E5 772 aa24.04■■□□□ 1.44
CTSB-233ENST00000534636 LARGE2Q8N3Y3 721 aa24.03■■□□□ 1.44
CTSB-233ENST00000534636 SLC10A5Q5PT55 438 aa24.02■■□□□ 1.44
CTSB-233ENST00000534636 C3orf67Q6ZVT6 689 aa24.02■■□□□ 1.44
CTSB-233ENST00000534636 CFAP44Q96MT7 982 aa24.02■■□□□ 1.44
CTSB-233ENST00000534636 CREBZFQ9NS37 354 aa24.02■■□□□ 1.44
CTSB-233ENST00000534636 TRMT112Q9UI30 125 aaKnown RBP24.02■■□□□ 1.44
CTSB-233ENST00000534636 EPHX2P34913 555 aa24.01■■□□□ 1.43
CTSB-233ENST00000534636 TCIRG1Q13488 830 aa24.01■■□□□ 1.43
CTSB-233ENST00000534636 PNMA8AQ86V59 439 aaPredicted RBP24.01■■□□□ 1.43
CTSB-233ENST00000534636 NLRP10Q86W26 655 aa24.01■■□□□ 1.43
CTSB-233ENST00000534636 DBF4Q9UBU7 674 aaPredicted RBP24.01■■□□□ 1.43
CTSB-233ENST00000534636 ABCC4O15439 1325 aa24.01■■□□□ 1.43
CTSB-233ENST00000534636 SH3TC1Q8TE82 1336 aa24.01■■□□□ 1.43
CTSB-233ENST00000534636 CALD1Q05682 793 aaKnown RBP24■■□□□ 1.43
CTSB-233ENST00000534636 CLEC11AQ9Y240 323 aa24■■□□□ 1.43
CTSB-233ENST00000534636 GJA3Q9Y6H8 435 aa24■■□□□ 1.43
CTSB-233ENST00000534636 LMOD1P29536 600 aaPredicted RBP23.99■■□□□ 1.43
CTSB-233ENST00000534636 NIM1KQ8IY84 436 aa23.99■■□□□ 1.43
CTSB-233ENST00000534636 ATP6V0A2Q9Y487 856 aa23.99■■□□□ 1.43
CTSB-233ENST00000534636 PPIP5K2O43314 1243 aa23.98■■□□□ 1.43
CTSB-233ENST00000534636 HCLS1P14317 486 aaPredicted RBP23.98■■□□□ 1.43
CTSB-233ENST00000534636 DDX46Q7L014 1031 aaKnown RBP23.98■■□□□ 1.43
CTSB-233ENST00000534636 SUPT20HQ8NEM7 779 aa23.98■■□□□ 1.43
CTSB-233ENST00000534636 PLBD2Q8NHP8 589 aa23.98■■□□□ 1.43
CTSB-233ENST00000534636 COL4A5P29400 1685 aa23.97■■□□□ 1.43
CTSB-233ENST00000534636 DUSP27Q5VZP5 1158 aa23.97■■□□□ 1.43
CTSB-233ENST00000534636 ANKRD13DQ6ZTN6 518 aa23.97■■□□□ 1.43
CTSB-233ENST00000534636 ADAMTSL1Q8N6G6 1762 aa23.97■■□□□ 1.43
CTSB-233ENST00000534636 MBIPQ9NS73 344 aa23.97■■□□□ 1.43
CTSB-233ENST00000534636 HYPKQ9NX55 129 aa23.97■■□□□ 1.43
CTSB-233ENST00000534636 BBOX1O75936 387 aa23.96■■□□□ 1.43
CTSB-233ENST00000534636 VPS33BQ9H267 617 aa23.96■■□□□ 1.43
CTSB-233ENST00000534636 PASKQ96RG2 1323 aa23.95■■□□□ 1.42
CTSB-233ENST00000534636 APAF1O14727 1248 aa23.95■■□□□ 1.42
CTSB-233ENST00000534636 IFT57Q9NWB7 429 aa23.95■■□□□ 1.42
CTSB-233ENST00000534636 DDX60Q8IY21 1712 aaKnown RBP23.95■■□□□ 1.42
CTSB-233ENST00000534636 GNAI1P63096 354 aa23.94■■□□□ 1.42
CTSB-233ENST00000534636 AOC3Q16853 763 aa23.94■■□□□ 1.42
CTSB-233ENST00000534636 DPP8Q6V1X1 898 aaPredicted RBP23.94■■□□□ 1.42
CTSB-233ENST00000534636 MKRN1Q9UHC7 482 aaKnown RBP23.94■■□□□ 1.42
CTSB-233ENST00000534636 GRAPQ13588 217 aa23.93■■□□□ 1.42
CTSB-233ENST00000534636 TMC4Q7Z404 712 aa23.93■■□□□ 1.42
CTSB-233ENST00000534636 SLC51AQ86UW1 340 aa23.93■■□□□ 1.42
CTSB-233ENST00000534636 GRAPLQ8TC17 118 aaPredicted RBP23.93■■□□□ 1.42
CTSB-233ENST00000534636 TMEM88BA6NKF7 163 aa23.92■■□□□ 1.42
CTSB-233ENST00000534636 HSPA1AP0DMV8 641 aaKnown RBP23.92■■□□□ 1.42
CTSB-233ENST00000534636 HSPA1BP0DMV9 641 aaKnown RBP23.92■■□□□ 1.42
CTSB-233ENST00000534636 GOLGA2Q08379 1002 aa23.92■■□□□ 1.42
CTSB-233ENST00000534636 SP8Q8IXZ3 490 aa23.92■■□□□ 1.42
CTSB-233ENST00000534636 MPNDQ8N594 471 aa23.92■■□□□ 1.42
CTSB-233ENST00000534636 TAF1P21675 1872 aa23.92■■□□□ 1.42
CTSB-233ENST00000534636 RTFDC1Q9BY42 306 aaPredicted RBP23.91■■□□□ 1.42
CTSB-233ENST00000534636 LTBP1Q14766 1721 aa23.9■■□□□ 1.42
CTSB-233ENST00000534636 ATP5J2-PTCD1G3V325 749 aa23.9■■□□□ 1.42
CTSB-233ENST00000534636 ZNF853P0CG23 659 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms